RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 EML1O00423 815 aa10.98□□□□□ -0.65
SNRNP40-201ENST00000263694 TBX3O15119 743 aa10.98□□□□□ -0.65
SNRNP40-201ENST00000263694 EIF3JO75822 258 aaKnown RBP10.98□□□□□ -0.65
SNRNP40-201ENST00000263694 SNAI1O95863 264 aaPredicted RBP10.98□□□□□ -0.65
SNRNP40-201ENST00000263694 MNX1P50219 401 aaPredicted RBP10.98□□□□□ -0.65
SNRNP40-201ENST00000263694 SP2Q02086 613 aa10.98□□□□□ -0.65
SNRNP40-201ENST00000263694 SP3Q02447 781 aa10.98□□□□□ -0.65
SNRNP40-201ENST00000263694 SPIRE1Q08AE8 756 aa10.98□□□□□ -0.65
SNRNP40-201ENST00000263694 KARSQ15046 597 aaKnown RBP10.98□□□□□ -0.65
SNRNP40-201ENST00000263694 CAMK4Q16566 473 aa10.98□□□□□ -0.65
SNRNP40-201ENST00000263694 KLHL40Q2TBA0 621 aa10.98□□□□□ -0.65
SNRNP40-201ENST00000263694 NCAPH2Q6IBW4 605 aa10.98□□□□□ -0.65
SNRNP40-201ENST00000263694 CCDC73Q6ZRK6 1079 aa10.98□□□□□ -0.65
SNRNP40-201ENST00000263694 ARMCX2Q7L311 632 aa10.98□□□□□ -0.65
SNRNP40-201ENST00000263694 NIPA1Q7RTP0 329 aa10.98□□□□□ -0.65
SNRNP40-201ENST00000263694 SLFN12Q8IYM2 578 aa10.98□□□□□ -0.65
SNRNP40-201ENST00000263694 FMR1NBQ8N0W7 255 aaPredicted RBP10.98□□□□□ -0.65
SNRNP40-201ENST00000263694 CD99L2Q8TCZ2 262 aa10.98□□□□□ -0.65
SNRNP40-201ENST00000263694 USP6NLQ92738 828 aa10.98□□□□□ -0.65
SNRNP40-201ENST00000263694 MAML3Q96JK9 1138 aa10.98□□□□□ -0.65
SNRNP40-201ENST00000263694 FAM20AQ96MK3 541 aa10.98□□□□□ -0.65
SNRNP40-201ENST00000263694 MMTAG2Q9BU76 263 aaKnown RBP10.98□□□□□ -0.65
SNRNP40-201ENST00000263694 TMEM63CQ9P1W3 806 aa10.98□□□□□ -0.65
SNRNP40-201ENST00000263694 VAV3Q9UKW4 847 aa10.98□□□□□ -0.65
SNRNP40-201ENST00000263694 KCNH3Q9ULD8 1083 aa10.98□□□□□ -0.65
SNRNP40-201ENST00000263694 HPSEQ9Y251 543 aa10.98□□□□□ -0.65
SNRNP40-201ENST00000263694 POLR2DO15514 142 aaKnown RBP10.97□□□□□ -0.65
SNRNP40-201ENST00000263694 GAS7O60861 476 aa10.97□□□□□ -0.65
SNRNP40-201ENST00000263694 ZNF202O95125 648 aa10.97□□□□□ -0.65
SNRNP40-201ENST00000263694 ARIH2O95376 493 aa10.97□□□□□ -0.65
SNRNP40-201ENST00000263694 MBD3O95983 291 aa10.97□□□□□ -0.65
SNRNP40-201ENST00000263694 FCGRTP55899 365 aa10.97□□□□□ -0.65
SNRNP40-201ENST00000263694 SETQ01105 290 aaPredicted RBP10.97□□□□□ -0.65
SNRNP40-201ENST00000263694 FAM160A1Q05DH4 1040 aa10.97□□□□□ -0.65
SNRNP40-201ENST00000263694 PDIA5Q14554 519 aa10.97□□□□□ -0.65
SNRNP40-201ENST00000263694 LY6KQ17RY6 165 aa10.97□□□□□ -0.65
SNRNP40-201ENST00000263694 TMEM266Q2M3C6 531 aa10.97□□□□□ -0.65
SNRNP40-201ENST00000263694 SKOR2Q2VWA4 1001 aaPredicted RBP10.97□□□□□ -0.65
SNRNP40-201ENST00000263694 PRAMEF19Q5SWL8 479 aa10.97□□□□□ -0.65
SNRNP40-201ENST00000263694 OTOP1Q7RTM1 612 aa10.97□□□□□ -0.65
SNRNP40-201ENST00000263694 NLRX1Q86UT6 975 aa10.97□□□□□ -0.65
SNRNP40-201ENST00000263694 MORC4Q8TE76 937 aa10.97□□□□□ -0.65
SNRNP40-201ENST00000263694 LRRC15Q8TF66 581 aa10.97□□□□□ -0.65
SNRNP40-201ENST00000263694 GPRASP2Q96D09 838 aa10.97□□□□□ -0.65
SNRNP40-201ENST00000263694 UNC45AQ9H3U1 944 aa10.97□□□□□ -0.65
SNRNP40-201ENST00000263694 FAM13BQ9NYF5 915 aa10.97□□□□□ -0.65
SNRNP40-201ENST00000263694 ZNF236Q9UL36 1845 aa10.97□□□□□ -0.65
SNRNP40-201ENST00000263694 FAM237AA0A1B0GTK4 181 aa10.96□□□□□ -0.65
SNRNP40-201ENST00000263694 ASB14A6NK59 587 aa10.96□□□□□ -0.65
SNRNP40-201ENST00000263694 GPR25O00155 361 aa10.96□□□□□ -0.65
SNRNP40-201ENST00000263694 KCNA2P16389 499 aa10.96□□□□□ -0.65
SNRNP40-201ENST00000263694 UBA7P41226 1012 aa10.96□□□□□ -0.65
SNRNP40-201ENST00000263694 SYKP43405 635 aa10.96□□□□□ -0.65
SNRNP40-201ENST00000263694 SP4Q02446 784 aa10.96□□□□□ -0.65
SNRNP40-201ENST00000263694 ECM1Q16610 540 aa10.96□□□□□ -0.65
SNRNP40-201ENST00000263694 LONRF3Q496Y0 759 aa10.96□□□□□ -0.65
SNRNP40-201ENST00000263694 CABP7Q86V35 215 aa10.96□□□□□ -0.65
SNRNP40-201ENST00000263694 ERCC4Q92889 916 aaPredicted RBP10.96□□□□□ -0.65
SNRNP40-201ENST00000263694 TINF2Q9BSI4 451 aa10.96□□□□□ -0.65
SNRNP40-201ENST00000263694 CFHR5Q9BXR6 569 aa10.96□□□□□ -0.65
SNRNP40-201ENST00000263694 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.96□□□□□ -0.65
SNRNP40-201ENST00000263694 SERTAD1Q9UHV2 236 aa10.96□□□□□ -0.65
SNRNP40-201ENST00000263694 B4DLN1 442 aa10.95□□□□□ -0.66
SNRNP40-201ENST00000263694 FOXN1O15353 648 aa10.95□□□□□ -0.66
SNRNP40-201ENST00000263694 MED24O75448 989 aa10.95□□□□□ -0.66
SNRNP40-201ENST00000263694 STAM2O75886 525 aa10.95□□□□□ -0.66
SNRNP40-201ENST00000263694 CCNE2O96020 404 aa10.95□□□□□ -0.66
SNRNP40-201ENST00000263694 ICAM3P32942 547 aa10.95□□□□□ -0.66
SNRNP40-201ENST00000263694 CYP2C19P33261 490 aa10.95□□□□□ -0.66
SNRNP40-201ENST00000263694 FLT3LGP49771 235 aa10.95□□□□□ -0.66
SNRNP40-201ENST00000263694 PRKCZQ05513 592 aa10.95□□□□□ -0.66
SNRNP40-201ENST00000263694 GRB10Q13322 594 aa10.95□□□□□ -0.66
SNRNP40-201ENST00000263694 GNPTABQ3T906 1256 aa10.95□□□□□ -0.66
SNRNP40-201ENST00000263694 GJC2Q5T442 439 aaPredicted RBP10.95□□□□□ -0.66
SNRNP40-201ENST00000263694 TAPT1Q6NXT6 567 aa10.95□□□□□ -0.66
SNRNP40-201ENST00000263694 CYFIP1Q7L576 1253 aa10.95□□□□□ -0.66
SNRNP40-201ENST00000263694 GRAMD1CQ8IYS0 662 aa10.95□□□□□ -0.66
SNRNP40-201ENST00000263694 DNAJC5GQ8N7S2 189 aa10.95□□□□□ -0.66
SNRNP40-201ENST00000263694 SNX29Q8TEQ0 813 aa10.95□□□□□ -0.66
SNRNP40-201ENST00000263694 STAMQ92783 540 aa10.95□□□□□ -0.66
SNRNP40-201ENST00000263694 COPS5Q92905 334 aa10.95□□□□□ -0.66
SNRNP40-201ENST00000263694 DHX58Q96C10 678 aa10.95□□□□□ -0.66
SNRNP40-201ENST00000263694 AK8Q96MA6 479 aa10.95□□□□□ -0.66
SNRNP40-201ENST00000263694 PNMA5Q96PV4 448 aa10.95□□□□□ -0.66
SNRNP40-201ENST00000263694 MPHOSPH6Q99547 160 aaKnown RBP10.95□□□□□ -0.66
SNRNP40-201ENST00000263694 RIT2Q99578 217 aa10.95□□□□□ -0.66
SNRNP40-201ENST00000263694 TEKT3Q9BXF9 490 aa10.95□□□□□ -0.66
SNRNP40-201ENST00000263694 KATNBL1Q9H079 304 aa10.95□□□□□ -0.66
SNRNP40-201ENST00000263694 RGL1Q9NZL6 768 aa10.95□□□□□ -0.66
SNRNP40-201ENST00000263694 DIS3Q9Y2L1 958 aaKnown RBP10.95□□□□□ -0.66
SNRNP40-201ENST00000263694 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.94□□□□□ -0.66
SNRNP40-201ENST00000263694 MAFGO15525 162 aa10.94□□□□□ -0.66
SNRNP40-201ENST00000263694 ATMINO43313 823 aaPredicted RBP10.94□□□□□ -0.66
SNRNP40-201ENST00000263694 HOXC6P09630 235 aa10.94□□□□□ -0.66
SNRNP40-201ENST00000263694 UBA1P22314 1058 aaKnown RBP10.94□□□□□ -0.66
SNRNP40-201ENST00000263694 CCT6AP40227 531 aaKnown RBP10.94□□□□□ -0.66
SNRNP40-201ENST00000263694 RGS2P41220 211 aa10.94□□□□□ -0.66
SNRNP40-201ENST00000263694 CYP4A11Q02928 519 aa10.94□□□□□ -0.66
SNRNP40-201ENST00000263694 PPP2R5CQ13362 524 aa10.94□□□□□ -0.66
SNRNP40-201ENST00000263694 CTTNQ14247 550 aaKnown RBP10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms