RNA–Protein interactions for RNA: ENST00000262675.11

TTC39A-201, Transcript of tetratricopeptide repeat domain 39A, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TTC39A, Length 2,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-201ENST00000262675 CBFA2T2O43439 604 aa10.89□□□□□ -0.67
TTC39A-201ENST00000262675 CD4P01730 458 aa10.89□□□□□ -0.67
TTC39A-201ENST00000262675 PCP11498 1178 aaKnown RBP10.89□□□□□ -0.67
TTC39A-201ENST00000262675 TNNT1P13805 278 aa10.89□□□□□ -0.67
TTC39A-201ENST00000262675 SLC1A4P43007 532 aa10.89□□□□□ -0.67
TTC39A-201ENST00000262675 TPD52L1Q16890 204 aaPredicted RBP10.89□□□□□ -0.67
TTC39A-201ENST00000262675 RCSD1Q6JBY9 416 aa10.89□□□□□ -0.67
TTC39A-201ENST00000262675 RPUSD2Q8IZ73 545 aaKnown RBP10.89□□□□□ -0.67
TTC39A-201ENST00000262675 ATXN2LQ8WWM7 1075 aaKnown RBP10.89□□□□□ -0.67
TTC39A-201ENST00000262675 LENG1Q96BZ8 264 aaPredicted RBP10.89□□□□□ -0.67
TTC39A-201ENST00000262675 CCDC94Q9BW85 323 aaPredicted RBP10.89□□□□□ -0.67
TTC39A-201ENST00000262675 MCM3APO60318 1980 aa10.89□□□□□ -0.67
TTC39A-201ENST00000262675 B4E1Z4 1266 aa10.89□□□□□ -0.67
TTC39A-201ENST00000262675 KIF28PB7ZC32 967 aa10.89□□□□□ -0.67
TTC39A-201ENST00000262675 TMEM232C9JQI7 657 aa10.89□□□□□ -0.67
TTC39A-201ENST00000262675 RIOK3O14730 519 aaKnown RBP10.89□□□□□ -0.67
TTC39A-201ENST00000262675 IFIT3O14879 490 aaKnown RBP10.89□□□□□ -0.67
TTC39A-201ENST00000262675 LRMPQ12912 555 aa10.89□□□□□ -0.67
TTC39A-201ENST00000262675 IKQ13123 557 aaPredicted RBP10.89□□□□□ -0.67
TTC39A-201ENST00000262675 GRIN2CQ14957 1233 aa10.89□□□□□ -0.67
TTC39A-201ENST00000262675 PTPAQ15257 358 aa10.89□□□□□ -0.67
TTC39A-201ENST00000262675 RILPL1Q5EBL4 403 aa10.89□□□□□ -0.67
TTC39A-201ENST00000262675 RESP18Q5W5W9 173 aa10.89□□□□□ -0.67
TTC39A-201ENST00000262675 CCDC34Q96HJ3 373 aa10.89□□□□□ -0.67
TTC39A-201ENST00000262675 FGD4Q96M96 766 aa10.89□□□□□ -0.67
TTC39A-201ENST00000262675 MPHOSPH6Q99547 160 aaKnown RBP10.89□□□□□ -0.67
TTC39A-201ENST00000262675 KATNBL1Q9H079 304 aa10.89□□□□□ -0.67
TTC39A-201ENST00000262675 TSPYL2Q9H2G4 693 aaPredicted RBP10.89□□□□□ -0.67
TTC39A-201ENST00000262675 FOXP1Q9H334 677 aaPredicted RBP10.89□□□□□ -0.67
TTC39A-201ENST00000262675 EPB41L4AQ9HCS5 686 aaPredicted RBP10.89□□□□□ -0.67
TTC39A-201ENST00000262675 VTA1Q9NP79 307 aa10.89□□□□□ -0.67
TTC39A-201ENST00000262675 RNF146Q9NTX7 359 aa10.89□□□□□ -0.67
TTC39A-201ENST00000262675 NEDD4P46934 1319 aa10.88□□□□□ -0.67
TTC39A-201ENST00000262675 MYADML2A6NDP7 307 aa10.88□□□□□ -0.67
TTC39A-201ENST00000262675 FGBP02675 491 aa10.88□□□□□ -0.67
TTC39A-201ENST00000262675 PFKMP08237 780 aa10.88□□□□□ -0.67
TTC39A-201ENST00000262675 SKILP12757 684 aa10.88□□□□□ -0.67
TTC39A-201ENST00000262675 NT5C2P49902 561 aa10.88□□□□□ -0.67
TTC39A-201ENST00000262675 TFAP4Q01664 338 aa10.88□□□□□ -0.67
TTC39A-201ENST00000262675 TLK2Q86UE8 772 aa10.88□□□□□ -0.67
TTC39A-201ENST00000262675 TRERF1Q96PN7 1200 aa10.88□□□□□ -0.67
TTC39A-201ENST00000262675 ADD3Q9UEY8 706 aaKnown RBP10.88□□□□□ -0.67
TTC39A-201ENST00000262675 CEP131Q9UPN4 1083 aa10.88□□□□□ -0.67
TTC39A-201ENST00000262675 LRRC37A2A6NM11 1700 aa10.88□□□□□ -0.67
TTC39A-201ENST00000262675 DEXIO95424 95 aa10.87□□□□□ -0.67
TTC39A-201ENST00000262675 SUPT20HL2P0C7V6 817 aa10.87□□□□□ -0.67
TTC39A-201ENST00000262675 CSF2RAP15509 400 aa10.87□□□□□ -0.67
TTC39A-201ENST00000262675 PPARAQ07869 468 aa10.87□□□□□ -0.67
TTC39A-201ENST00000262675 FSCN1Q16658 493 aaKnown RBP10.87□□□□□ -0.67
TTC39A-201ENST00000262675 CT47A1Q5JQC4 288 aaPredicted RBP10.87□□□□□ -0.67
TTC39A-201ENST00000262675 KANK3Q6NY19 840 aa10.87□□□□□ -0.67
TTC39A-201ENST00000262675 LRRC47Q8N1G4 583 aaKnown RBP10.87□□□□□ -0.67
TTC39A-201ENST00000262675 ZNF579Q8NAF0 562 aaKnown RBP10.87□□□□□ -0.67
TTC39A-201ENST00000262675 CCDC112Q8NEF3 446 aa10.87□□□□□ -0.67
TTC39A-201ENST00000262675 ANKRD7Q92527 254 aa10.87□□□□□ -0.67
TTC39A-201ENST00000262675 MAP3K14Q99558 947 aa10.87□□□□□ -0.67
TTC39A-201ENST00000262675 MAF1Q9H063 256 aa10.87□□□□□ -0.67
TTC39A-201ENST00000262675 HIPK3Q9H422 1215 aa10.87□□□□□ -0.67
TTC39A-201ENST00000262675 A1CFQ9NQ94 594 aaKnown RBP10.87□□□□□ -0.67
TTC39A-201ENST00000262675 ZSWIM5Q9P217 1185 aa10.87□□□□□ -0.67
TTC39A-201ENST00000262675 ANAPC4Q9UJX5 808 aa10.87□□□□□ -0.67
TTC39A-201ENST00000262675 GNEQ9Y223 722 aaKnown RBP10.87□□□□□ -0.67
TTC39A-201ENST00000262675 B4DLN1 442 aa10.87□□□□□ -0.67
TTC39A-201ENST00000262675 PRDM1O75626 825 aa10.87□□□□□ -0.67
TTC39A-201ENST00000262675 XBP1P17861 261 aa10.87□□□□□ -0.67
TTC39A-201ENST00000262675 CDC27P30260 824 aa10.87□□□□□ -0.67
TTC39A-201ENST00000262675 MRPL12P52815 198 aaKnown RBP10.87□□□□□ -0.67
TTC39A-201ENST00000262675 ITGA7Q13683 1181 aa10.87□□□□□ -0.67
TTC39A-201ENST00000262675 WTAPQ15007 396 aa10.87□□□□□ -0.67
TTC39A-201ENST00000262675 PTPN14Q15678 1187 aa10.87□□□□□ -0.67
TTC39A-201ENST00000262675 ZNF365Q70YC5 407 aa10.87□□□□□ -0.67
TTC39A-201ENST00000262675 MICU3Q86XE3 530 aa10.87□□□□□ -0.67
TTC39A-201ENST00000262675 NOSTRINQ8IVI9 506 aa10.87□□□□□ -0.67
TTC39A-201ENST00000262675 PDCL2Q8N4E4 241 aa10.87□□□□□ -0.67
TTC39A-201ENST00000262675 KRI1Q8N9T8 703 aaKnown RBP10.87□□□□□ -0.67
TTC39A-201ENST00000262675 MORC4Q8TE76 937 aa10.87□□□□□ -0.67
TTC39A-201ENST00000262675 DCAF4Q8WV16 495 aa10.87□□□□□ -0.67
TTC39A-201ENST00000262675 PBX4Q9BYU1 374 aa10.87□□□□□ -0.67
TTC39A-201ENST00000262675 FAM217BQ9NTX9 383 aaPredicted RBP10.87□□□□□ -0.67
TTC39A-201ENST00000262675 DACH1Q9UI36 760 aa10.87□□□□□ -0.67
TTC39A-201ENST00000262675 TSPY2A6NKD2 308 aa10.86□□□□□ -0.67
TTC39A-201ENST00000262675 TNFRSF10AO00220 468 aa10.86□□□□□ -0.67
TTC39A-201ENST00000262675 MMP1P03956 469 aa10.86□□□□□ -0.67
TTC39A-201ENST00000262675 CCZ1BP86790 482 aa10.86□□□□□ -0.67
TTC39A-201ENST00000262675 CCZ1P86791 482 aaPredicted RBP10.86□□□□□ -0.67
TTC39A-201ENST00000262675 RTN1Q16799 776 aa10.86□□□□□ -0.67
TTC39A-201ENST00000262675 DPCR1Q3MIW9 517 aa10.86□□□□□ -0.67
TTC39A-201ENST00000262675 BRDTQ58F21 947 aaPredicted RBP10.86□□□□□ -0.67
TTC39A-201ENST00000262675 CEP135Q66GS9 1140 aa10.86□□□□□ -0.67
TTC39A-201ENST00000262675 NYAP1Q6ZVC0 841 aa10.86□□□□□ -0.67
TTC39A-201ENST00000262675 STK11IPQ8N1F8 1099 aa10.86□□□□□ -0.67
TTC39A-201ENST00000262675 C16orf45Q96MC5 204 aaPredicted RBP10.86□□□□□ -0.67
TTC39A-201ENST00000262675 HOMER2Q9NSB8 354 aa10.86□□□□□ -0.67
TTC39A-201ENST00000262675 THEGQ9P2T0 379 aa10.86□□□□□ -0.67
TTC39A-201ENST00000262675 ZNF536O15090 1300 aa10.86□□□□□ -0.67
TTC39A-201ENST00000262675 NKRFO15226 690 aaKnown RBP eCLIP10.86□□□□□ -0.67
TTC39A-201ENST00000262675 ADCY6O43306 1168 aa10.86□□□□□ -0.67
TTC39A-201ENST00000262675 KPNA6O60684 536 aa10.86□□□□□ -0.67
TTC39A-201ENST00000262675 BMP15O95972 392 aa10.86□□□□□ -0.67
TTC39A-201ENST00000262675 ICAM1P05362 532 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms