RNA–Protein interactions for RNA: ENST00000262188.12

SMARCD3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD3, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-201ENST00000262188 PCDHA12Q9UN75 941 aa30.99■■■□□ 2.55
SMARCD3-201ENST00000262188 LRCH2Q5VUJ6 765 aa30.99■■■□□ 2.55
SMARCD3-201ENST00000262188 MPHOSPH6Q99547 160 aaKnown RBP30.99■■■□□ 2.55
SMARCD3-201ENST00000262188 A0A1B0GVL5 298 aa30.98■■■□□ 2.55
SMARCD3-201ENST00000262188 B4DLN1 442 aa30.98■■■□□ 2.55
SMARCD3-201ENST00000262188 SPATA31C2B4DYI2 1134 aa30.98■■■□□ 2.55
SMARCD3-201ENST00000262188 CHMP2AO43633 222 aa30.98■■■□□ 2.55
SMARCD3-201ENST00000262188 GNPTABQ3T906 1256 aa30.98■■■□□ 2.55
SMARCD3-201ENST00000262188 GPT2Q8TD30 523 aa30.98■■■□□ 2.55
SMARCD3-201ENST00000262188 KATNBL1Q9H079 304 aa30.98■■■□□ 2.55
SMARCD3-201ENST00000262188 VAV3Q9UKW4 847 aa30.98■■■□□ 2.55
SMARCD3-201ENST00000262188 DDX11L8A8MPP1 907 aa30.97■■■□□ 2.55
SMARCD3-201ENST00000262188 DHX15O43143 795 aaKnown RBP30.97■■■□□ 2.55
SMARCD3-201ENST00000262188 PSMD10O75832 226 aa30.97■■■□□ 2.55
SMARCD3-201ENST00000262188 STAM2O75886 525 aa30.97■■■□□ 2.55
SMARCD3-201ENST00000262188 UBE2HP62256 183 aa30.97■■■□□ 2.55
SMARCD3-201ENST00000262188 LY6KQ17RY6 165 aa30.97■■■□□ 2.55
SMARCD3-201ENST00000262188 FAM20AQ96MK3 541 aa30.97■■■□□ 2.55
SMARCD3-201ENST00000262188 MORC2Q9Y6X9 1032 aaPredicted RBP30.97■■■□□ 2.55
SMARCD3-201ENST00000262188 TBX3O15119 743 aa30.97■■■□□ 2.55
SMARCD3-201ENST00000262188 LIG1P18858 919 aa30.97■■■□□ 2.55
SMARCD3-201ENST00000262188 SPIRE1Q08AE8 756 aa30.97■■■□□ 2.55
SMARCD3-201ENST00000262188 SLFN12Q8IYM2 578 aa30.97■■■□□ 2.55
SMARCD3-201ENST00000262188 FSIP1Q8NA03 581 aa30.97■■■□□ 2.55
SMARCD3-201ENST00000262188 TRIB2Q92519 343 aa30.97■■■□□ 2.55
SMARCD3-201ENST00000262188 SYMPKQ92797 1274 aaKnown RBP30.97■■■□□ 2.55
SMARCD3-201ENST00000262188 GAS7O60861 476 aa30.96■■■□□ 2.55
SMARCD3-201ENST00000262188 KCNA2P16389 499 aa30.96■■■□□ 2.55
SMARCD3-201ENST00000262188 SP4Q02446 784 aa30.96■■■□□ 2.55
SMARCD3-201ENST00000262188 GJC2Q5T442 439 aaPredicted RBP30.96■■■□□ 2.55
SMARCD3-201ENST00000262188 ERO1AQ96HE7 468 aa30.96■■■□□ 2.55
SMARCD3-201ENST00000262188 SRRDQ9UH36 339 aa30.96■■■□□ 2.55
SMARCD3-201ENST00000262188 ZHX1Q9UKY1 873 aaPredicted RBP30.96■■■□□ 2.55
SMARCD3-201ENST00000262188 ELNP15502 786 aa30.96■■■□□ 2.55
SMARCD3-201ENST00000262188 FXR2P51116 673 aaKnown RBP eCLIP30.96■■■□□ 2.55
SMARCD3-201ENST00000262188 TRIM32Q13049 653 aa30.96■■■□□ 2.55
SMARCD3-201ENST00000262188 NCAPH2Q6IBW4 605 aa30.96■■■□□ 2.55
SMARCD3-201ENST00000262188 TAPT1Q6NXT6 567 aa30.96■■■□□ 2.55
SMARCD3-201ENST00000262188 COPS5Q92905 334 aa30.96■■■□□ 2.55
SMARCD3-201ENST00000262188 UNC45AQ9H3U1 944 aa30.96■■■□□ 2.55
SMARCD3-201ENST00000262188 EML1O00423 815 aa30.95■■■□□ 2.54
SMARCD3-201ENST00000262188 TAF3Q5VWG9 929 aa30.95■■■□□ 2.54
SMARCD3-201ENST00000262188 ZSCAN30Q86W11 494 aa30.95■■■□□ 2.54
SMARCD3-201ENST00000262188 IGSF22Q8N9C0 903 aa30.95■■■□□ 2.54
SMARCD3-201ENST00000262188 SYNGAP1Q96PV0 1343 aa30.94■■■□□ 2.54
SMARCD3-201ENST00000262188 C11orf97A0A1B0GVM6 126 aaPredicted RBP30.94■■■□□ 2.54
SMARCD3-201ENST00000262188 ADCYAP1R1P41586 468 aa30.94■■■□□ 2.54
SMARCD3-201ENST00000262188 TMEM266Q2M3C6 531 aa30.94■■■□□ 2.54
SMARCD3-201ENST00000262188 RESP18Q5W5W9 173 aa30.94■■■□□ 2.54
SMARCD3-201ENST00000262188 OTOP1Q7RTM1 612 aa30.94■■■□□ 2.54
SMARCD3-201ENST00000262188 GTPBP4Q9BZE4 634 aaKnown RBP30.94■■■□□ 2.54
SMARCD3-201ENST00000262188 UBA1P22314 1058 aaKnown RBP30.94■■■□□ 2.54
SMARCD3-201ENST00000262188 ICAM3P32942 547 aa30.94■■■□□ 2.54
SMARCD3-201ENST00000262188 ZRSR1Q15695 479 aaKnown RBP30.94■■■□□ 2.54
SMARCD3-201ENST00000262188 LRWD1Q9UFC0 647 aa30.94■■■□□ 2.54
SMARCD3-201ENST00000262188 LOC102724159A0A0B4J2E5 919 aa30.93■■■□□ 2.54
SMARCD3-201ENST00000262188 DYNC1I1O14576 645 aa30.93■■■□□ 2.54
SMARCD3-201ENST00000262188 PFKFB1P16118 471 aa30.93■■■□□ 2.54
SMARCD3-201ENST00000262188 LONP1P36776 959 aaKnown RBP30.93■■■□□ 2.54
SMARCD3-201ENST00000262188 NDUFA8P51970 172 aa30.93■■■□□ 2.54
SMARCD3-201ENST00000262188 CCDC173Q0VFZ6 552 aa30.93■■■□□ 2.54
SMARCD3-201ENST00000262188 ACVR2BQ13705 512 aa30.93■■■□□ 2.54
SMARCD3-201ENST00000262188 PWP2Q15269 919 aaKnown RBP30.93■■■□□ 2.54
SMARCD3-201ENST00000262188 PLIN2Q99541 437 aa30.93■■■□□ 2.54
SMARCD3-201ENST00000262188 TEKT3Q9BXF9 490 aa30.93■■■□□ 2.54
SMARCD3-201ENST00000262188 A0A087X0B3 334 aa30.92■■■□□ 2.54
SMARCD3-201ENST00000262188 TRAK2O60296 914 aa30.92■■■□□ 2.54
SMARCD3-201ENST00000262188 PTMSP20962 102 aa30.92■■■□□ 2.54
SMARCD3-201ENST00000262188 CMA1P23946 247 aa30.92■■■□□ 2.54
SMARCD3-201ENST00000262188 OLFML2BQ68BL8 750 aa30.92■■■□□ 2.54
SMARCD3-201ENST00000262188 CYFIP1Q7L576 1253 aa30.92■■■□□ 2.54
SMARCD3-201ENST00000262188 PDILTQ8N807 584 aa30.92■■■□□ 2.54
SMARCD3-201ENST00000262188 MRPS27Q92552 414 aaKnown RBP30.92■■■□□ 2.54
SMARCD3-201ENST00000262188 A0A1W2PQ27 194 aa30.92■■■□□ 2.54
SMARCD3-201ENST00000262188 A0A1W2PQ64 194 aa30.92■■■□□ 2.54
SMARCD3-201ENST00000262188 A0A1W2PQD8 194 aa30.92■■■□□ 2.54
SMARCD3-201ENST00000262188 ADCY6O43306 1168 aa30.92■■■□□ 2.54
SMARCD3-201ENST00000262188 CCNE2O96020 404 aa30.92■■■□□ 2.54
SMARCD3-201ENST00000262188 IGHA2P01877 340 aa30.92■■■□□ 2.54
SMARCD3-201ENST00000262188 HS1BP3Q53T59 392 aa30.92■■■□□ 2.54
SMARCD3-201ENST00000262188 ZNF579Q8NAF0 562 aaKnown RBP30.92■■■□□ 2.54
SMARCD3-201ENST00000262188 RIT2Q99578 217 aa30.92■■■□□ 2.54
SMARCD3-201ENST00000262188 MMTAG2Q9BU76 263 aaKnown RBP30.92■■■□□ 2.54
SMARCD3-201ENST00000262188 VTA1Q9NP79 307 aa30.92■■■□□ 2.54
SMARCD3-201ENST00000262188 DDX41Q9UJV9 622 aaKnown RBP30.92■■■□□ 2.54
SMARCD3-201ENST00000262188 XRCC5P13010 732 aaKnown RBP30.91■■■□□ 2.54
SMARCD3-201ENST00000262188 CCDC62Q6P9F0 684 aa30.91■■■□□ 2.54
SMARCD3-201ENST00000262188 LENG1Q96BZ8 264 aaPredicted RBP30.91■■■□□ 2.54
SMARCD3-201ENST00000262188 CDHR1Q96JP9 859 aa30.91■■■□□ 2.54
SMARCD3-201ENST00000262188 TRIM17Q9Y577 477 aa30.91■■■□□ 2.54
SMARCD3-201ENST00000262188 MAFGO15525 162 aa30.9■■■□□ 2.54
SMARCD3-201ENST00000262188 TXNP10599 105 aaKnown RBP30.9■■■□□ 2.54
SMARCD3-201ENST00000262188 ABHD16BQ9H3Z7 469 aa30.9■■■□□ 2.54
SMARCD3-201ENST00000262188 CASP8AP2Q9UKL3 1982 aa30.9■■■□□ 2.54
SMARCD3-201ENST00000262188 NR1I2O75469 434 aa30.9■■■□□ 2.54
SMARCD3-201ENST00000262188 KARSQ15046 597 aaKnown RBP30.9■■■□□ 2.54
SMARCD3-201ENST00000262188 B3GNT9Q6UX72 402 aa30.9■■■□□ 2.54
SMARCD3-201ENST00000262188 PPP1R9BQ96SB3 815 aa30.9■■■□□ 2.54
SMARCD3-201ENST00000262188 FOXN1O15353 648 aa30.89■■■□□ 2.54
SMARCD3-201ENST00000262188 GGPS1O95749 300 aa30.89■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms