RNA–Protein interactions for RNA: ENST00000261366.9

LMNB1-201, Transcript of lamin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNB1, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-201ENST00000261366 SPATA31A7Q8IWB4 1347 aa17.48■□□□□ 0.39
LMNB1-201ENST00000261366 PJA2O43164 708 aa17.48■□□□□ 0.39
LMNB1-201ENST00000261366 TDP2O95551 362 aa17.48■□□□□ 0.39
LMNB1-201ENST00000261366 ACTN1P12814 892 aa17.48■□□□□ 0.39
LMNB1-201ENST00000261366 CDC37Q16543 378 aaPredicted RBP17.48■□□□□ 0.39
LMNB1-201ENST00000261366 MDM1Q8TC05 714 aa17.48■□□□□ 0.39
LMNB1-201ENST00000261366 GRID2IPA4D2P6 1211 aa17.47■□□□□ 0.39
LMNB1-201ENST00000261366 SMIM23A6NLE4 172 aa17.47■□□□□ 0.39
LMNB1-201ENST00000261366 DNM1LO00429 736 aa17.47■□□□□ 0.39
LMNB1-201ENST00000261366 ERFEQ4G0M1 354 aa17.47■□□□□ 0.39
LMNB1-201ENST00000261366 LRRC55Q6ZSA7 311 aa17.47■□□□□ 0.39
LMNB1-201ENST00000261366 DZIP1Q86YF9 867 aaKnown RBP17.47■□□□□ 0.39
LMNB1-201ENST00000261366 SNX29Q8TEQ0 813 aa17.47■□□□□ 0.39
LMNB1-201ENST00000261366 HMGB1P1B2RPK0 211 aaPredicted RBP17.47■□□□□ 0.39
LMNB1-201ENST00000261366 NOL4O94818 638 aa17.47■□□□□ 0.39
LMNB1-201ENST00000261366 SCP2P22307 547 aa17.47■□□□□ 0.39
LMNB1-201ENST00000261366 EPS15P42566 896 aa17.47■□□□□ 0.39
LMNB1-201ENST00000261366 TNNC1P63316 161 aa17.47■□□□□ 0.39
LMNB1-201ENST00000261366 UAP1Q16222 522 aaPredicted RBP17.47■□□□□ 0.39
LMNB1-201ENST00000261366 SOGA3Q5TF21 947 aa17.47■□□□□ 0.39
LMNB1-201ENST00000261366 USP38Q8NB14 1042 aa17.47■□□□□ 0.39
LMNB1-201ENST00000261366 N4BP2L2Q92802 583 aaPredicted RBP17.47■□□□□ 0.39
LMNB1-201ENST00000261366 INPP4AQ96PE3 977 aaPredicted RBP17.47■□□□□ 0.39
LMNB1-201ENST00000261366 CUEDC2Q9H467 287 aa17.47■□□□□ 0.39
LMNB1-201ENST00000261366 TAF1DQ9H5J8 278 aaPredicted RBP17.47■□□□□ 0.39
LMNB1-201ENST00000261366 CNOT8Q9UFF9 292 aaKnown RBP17.47■□□□□ 0.39
LMNB1-201ENST00000261366 AMACRQ9UHK6 382 aa17.47■□□□□ 0.39
LMNB1-201ENST00000261366 FBXL5Q9UKA1 691 aa17.47■□□□□ 0.39
LMNB1-201ENST00000261366 MINPP1Q9UNW1 487 aa17.47■□□□□ 0.39
LMNB1-201ENST00000261366 ZNF804BA4D1E1 1349 aa17.47■□□□□ 0.39
LMNB1-201ENST00000261366 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.46■□□□□ 0.39
LMNB1-201ENST00000261366 SLC37A4O43826 429 aa17.46■□□□□ 0.39
LMNB1-201ENST00000261366 ITGA4P13612 1032 aa17.46■□□□□ 0.39
LMNB1-201ENST00000261366 TNFRSF8P28908 595 aa17.46■□□□□ 0.39
LMNB1-201ENST00000261366 RPS6KA1Q15418 735 aa17.46■□□□□ 0.39
LMNB1-201ENST00000261366 DIXDC1Q155Q3 683 aa17.46■□□□□ 0.39
LMNB1-201ENST00000261366 NAB2Q15742 525 aa17.46■□□□□ 0.39
LMNB1-201ENST00000261366 ZNF444Q8N0Y2 327 aaPredicted RBP17.46■□□□□ 0.39
LMNB1-201ENST00000261366 RUBCNQ92622 972 aa17.46■□□□□ 0.39
LMNB1-201ENST00000261366 PNMA5Q96PV4 448 aa17.46■□□□□ 0.39
LMNB1-201ENST00000261366 TMEM47Q9BQJ4 181 aa17.46■□□□□ 0.39
LMNB1-201ENST00000261366 CELF4Q9BZC1 486 aaKnown RBP17.46■□□□□ 0.39
LMNB1-201ENST00000261366 OSBPL7Q9BZF2 842 aa17.46■□□□□ 0.39
LMNB1-201ENST00000261366 TMBIM4Q9HC24 238 aa17.46■□□□□ 0.39
LMNB1-201ENST00000261366 SH3GLB2Q9NR46 395 aa17.46■□□□□ 0.39
LMNB1-201ENST00000261366 GMNCA6NCL1 334 aa17.46■□□□□ 0.39
LMNB1-201ENST00000261366 DAPK3O43293 454 aa17.46■□□□□ 0.39
LMNB1-201ENST00000261366 NTSR2O95665 410 aa17.46■□□□□ 0.39
LMNB1-201ENST00000261366 GRM4Q14833 912 aa17.46■□□□□ 0.39
LMNB1-201ENST00000261366 CALCRLQ16602 461 aa17.46■□□□□ 0.39
LMNB1-201ENST00000261366 MEI1Q5TIA1 1274 aa17.46■□□□□ 0.39
LMNB1-201ENST00000261366 UNC13DQ70J99 1090 aa17.46■□□□□ 0.39
LMNB1-201ENST00000261366 WHAMMQ8TF30 809 aa17.46■□□□□ 0.39
LMNB1-201ENST00000261366 PIGSQ96S52 555 aa17.46■□□□□ 0.39
LMNB1-201ENST00000261366 TSG101Q99816 390 aa17.46■□□□□ 0.39
LMNB1-201ENST00000261366 ARPP21Q9UBL0 812 aaPredicted RBP17.46■□□□□ 0.39
LMNB1-201ENST00000261366 SUFUQ9UMX1 484 aa17.46■□□□□ 0.39
LMNB1-201ENST00000261366 NUP98P52948 1817 aa17.46■□□□□ 0.38
LMNB1-201ENST00000261366 NPHP3-ACAD11A0A0J9YXS1 232 aa17.46■□□□□ 0.38
LMNB1-201ENST00000261366 A6NNZ2 444 aa17.46■□□□□ 0.38
LMNB1-201ENST00000261366 CHUKO15111 745 aa17.46■□□□□ 0.38
LMNB1-201ENST00000261366 MAGOHP61326 146 aaKnown RBP17.46■□□□□ 0.38
LMNB1-201ENST00000261366 ZNF844Q08AG5 666 aa17.46■□□□□ 0.38
LMNB1-201ENST00000261366 TUBB8Q3ZCM7 444 aa17.46■□□□□ 0.38
LMNB1-201ENST00000261366 RNF10Q8N5U6 811 aaKnown RBP17.46■□□□□ 0.38
LMNB1-201ENST00000261366 MAGOHBQ96A72 148 aaKnown RBP17.46■□□□□ 0.38
LMNB1-201ENST00000261366 AK8Q96MA6 479 aa17.46■□□□□ 0.38
LMNB1-201ENST00000261366 TSKSQ9UJT2 592 aa17.46■□□□□ 0.38
LMNB1-201ENST00000261366 MARCH6O60337 910 aa17.45■□□□□ 0.38
LMNB1-201ENST00000261366 SERPING1P05155 500 aa17.45■□□□□ 0.38
LMNB1-201ENST00000261366 PCP11498 1178 aaKnown RBP17.45■□□□□ 0.38
LMNB1-201ENST00000261366 PRPHP41219 470 aa17.45■□□□□ 0.38
LMNB1-201ENST00000261366 PTF1AQ7RTS3 328 aa17.45■□□□□ 0.38
LMNB1-201ENST00000261366 CPLX4Q7Z7G2 160 aa17.45■□□□□ 0.38
LMNB1-201ENST00000261366 TXNRD3Q86VQ6 643 aa17.45■□□□□ 0.38
LMNB1-201ENST00000261366 MAPKAPK5Q8IW41 473 aa17.45■□□□□ 0.38
LMNB1-201ENST00000261366 TGFBRAP1Q8WUH2 860 aa17.45■□□□□ 0.38
LMNB1-201ENST00000261366 COA7Q96BR5 231 aa17.45■□□□□ 0.38
LMNB1-201ENST00000261366 ATP6V0A2Q9Y487 856 aa17.45■□□□□ 0.38
LMNB1-201ENST00000261366 AHDC1Q5TGY3 1603 aaPredicted RBP17.45■□□□□ 0.38
LMNB1-201ENST00000261366 RPSAP08865 295 aaKnown RBP17.45■□□□□ 0.38
LMNB1-201ENST00000261366 COPB2P35606 906 aa17.45■□□□□ 0.38
LMNB1-201ENST00000261366 KRT71Q3SY84 523 aa17.45■□□□□ 0.38
LMNB1-201ENST00000261366 TBC1D31Q96DN5 1066 aa17.45■□□□□ 0.38
LMNB1-201ENST00000261366 C8orf37Q96NL8 207 aa17.45■□□□□ 0.38
LMNB1-201ENST00000261366 ATP8A2Q9NTI2 1148 aa17.45■□□□□ 0.38
LMNB1-201ENST00000261366 COL4A3BPQ9Y5P4 624 aa17.45■□□□□ 0.38
LMNB1-201ENST00000261366 TAF1P21675 1872 aa17.44■□□□□ 0.38
LMNB1-201ENST00000261366 SSU72P8A0A1W2PR75 194 aa17.44■□□□□ 0.38
LMNB1-201ENST00000261366 LAD1O00515 517 aa17.44■□□□□ 0.38
LMNB1-201ENST00000261366 SART1O43290 800 aaKnown RBP17.44■□□□□ 0.38
LMNB1-201ENST00000261366 NF2P35240 595 aa17.44■□□□□ 0.38
LMNB1-201ENST00000261366 KRT25Q7Z3Z0 450 aa17.44■□□□□ 0.38
LMNB1-201ENST00000261366 SPATS2Q86XZ4 545 aaKnown RBP17.44■□□□□ 0.38
LMNB1-201ENST00000261366 SH3RF3Q8TEJ3 882 aaPredicted RBP17.44■□□□□ 0.38
LMNB1-201ENST00000261366 C6orf50Q9HD87 102 aa17.44■□□□□ 0.38
LMNB1-201ENST00000261366 ODF2LQ9ULJ1 636 aa17.44■□□□□ 0.38
LMNB1-201ENST00000261366 LEMD3Q9Y2U8 911 aa17.44■□□□□ 0.38
LMNB1-201ENST00000261366 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.44■□□□□ 0.38
LMNB1-201ENST00000261366 FRMPD2Q68DX3 1309 aaPredicted RBP17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms