RNA–Protein interactions for RNA: ENST00000260956.8

SSB-201, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-201ENST00000260956 USP17L6PQ6QN14 398 aa19.73■□□□□ 0.75
SSB-201ENST00000260956 CALML4Q96GE6 196 aa19.73■□□□□ 0.75
SSB-201ENST00000260956 NUP88Q99567 741 aaPredicted RBP19.73■□□□□ 0.75
SSB-201ENST00000260956 PCDHA1Q9Y5I3 950 aa19.73■□□□□ 0.75
SSB-201ENST00000260956 SMCHD1A6NHR9 2005 aa19.73■□□□□ 0.75
SSB-201ENST00000260956 PSMA7O14818 248 aa19.73■□□□□ 0.75
SSB-201ENST00000260956 CETPP11597 493 aa19.73■□□□□ 0.75
SSB-201ENST00000260956 HMGCS2P54868 508 aa19.73■□□□□ 0.75
SSB-201ENST00000260956 INHBEP58166 350 aa19.73■□□□□ 0.75
SSB-201ENST00000260956 ASIC1P78348 528 aa19.73■□□□□ 0.75
SSB-201ENST00000260956 AP3B2Q13367 1082 aa19.73■□□□□ 0.75
SSB-201ENST00000260956 MTMR2Q13614 643 aa19.73■□□□□ 0.75
SSB-201ENST00000260956 SYDE2Q5VT97 1194 aa19.73■□□□□ 0.75
SSB-201ENST00000260956 RAD9BQ6WBX8 426 aa19.73■□□□□ 0.75
SSB-201ENST00000260956 LARP4BQ92615 738 aaKnown RBP19.73■□□□□ 0.75
SSB-201ENST00000260956 P2RX5Q93086 422 aa19.73■□□□□ 0.75
SSB-201ENST00000260956 CCDC51Q96ER9 411 aa19.73■□□□□ 0.75
SSB-201ENST00000260956 PVALEFA0A1B0GWK0 134 aa19.72■□□□□ 0.75
SSB-201ENST00000260956 SLC26A4O43511 780 aa19.72■□□□□ 0.75
SSB-201ENST00000260956 TBC1D8O95759 1140 aa19.72■□□□□ 0.75
SSB-201ENST00000260956 FCER1AP12319 257 aa19.72■□□□□ 0.75
SSB-201ENST00000260956 USP11P51784 963 aa19.72■□□□□ 0.75
SSB-201ENST00000260956 PDE4DQ08499 809 aa19.72■□□□□ 0.75
SSB-201ENST00000260956 MCM6Q14566 821 aa19.72■□□□□ 0.75
SSB-201ENST00000260956 MTF1Q14872 753 aa19.72■□□□□ 0.75
SSB-201ENST00000260956 KIAA1755Q5JYT7 1200 aa19.72■□□□□ 0.75
SSB-201ENST00000260956 UNC13DQ70J99 1090 aa19.72■□□□□ 0.75
SSB-201ENST00000260956 NOC3LQ8WTT2 800 aaKnown RBP19.72■□□□□ 0.75
SSB-201ENST00000260956 LENG9Q96B70 501 aa19.72■□□□□ 0.75
SSB-201ENST00000260956 NAP1L4Q99733 375 aaKnown RBP19.72■□□□□ 0.75
SSB-201ENST00000260956 NAA15Q9BXJ9 866 aaKnown RBP19.72■□□□□ 0.75
SSB-201ENST00000260956 GINM1Q9NU53 330 aa19.72■□□□□ 0.75
SSB-201ENST00000260956 EXOC1Q9NV70 894 aa19.72■□□□□ 0.75
SSB-201ENST00000260956 A0A1W2PQC6 194 aa19.71■□□□□ 0.75
SSB-201ENST00000260956 PPP1R2P41236 205 aa19.71■□□□□ 0.75
SSB-201ENST00000260956 BACE1P56817 501 aa19.71■□□□□ 0.75
SSB-201ENST00000260956 AMPD3Q01432 767 aa19.71■□□□□ 0.75
SSB-201ENST00000260956 SPIRE1Q08AE8 756 aa19.71■□□□□ 0.75
SSB-201ENST00000260956 TREML2Q5T2D2 321 aa19.71■□□□□ 0.75
SSB-201ENST00000260956 SYT10Q6XYQ8 523 aa19.71■□□□□ 0.75
SSB-201ENST00000260956 REM2Q8IYK8 340 aaPredicted RBP19.71■□□□□ 0.75
SSB-201ENST00000260956 SNX29Q8TEQ0 813 aa19.71■□□□□ 0.75
SSB-201ENST00000260956 ZNF592Q92610 1267 aa19.71■□□□□ 0.75
SSB-201ENST00000260956 EMILIN3Q9NT22 766 aa19.71■□□□□ 0.75
SSB-201ENST00000260956 N4BP3O15049 544 aa19.71■□□□□ 0.75
SSB-201ENST00000260956 ZSCAN12O43309 604 aa19.71■□□□□ 0.75
SSB-201ENST00000260956 CASP14P31944 242 aa19.71■□□□□ 0.75
SSB-201ENST00000260956 STIM1Q13586 685 aa19.71■□□□□ 0.75
SSB-201ENST00000260956 CENPPQ6IPU0 288 aa19.71■□□□□ 0.75
SSB-201ENST00000260956 FOXR2Q6PJQ5 311 aa19.71■□□□□ 0.75
SSB-201ENST00000260956 SV2BQ7L1I2 683 aa19.71■□□□□ 0.75
SSB-201ENST00000260956 ETNPPLQ8TBG4 499 aa19.71■□□□□ 0.75
SSB-201ENST00000260956 MAP7D2Q96T17 732 aa19.71■□□□□ 0.75
SSB-201ENST00000260956 AMNQ9BXJ7 453 aa19.71■□□□□ 0.75
SSB-201ENST00000260956 RAB34Q9BZG1 259 aa19.71■□□□□ 0.75
SSB-201ENST00000260956 VPS16Q9H269 839 aa19.71■□□□□ 0.75
SSB-201ENST00000260956 PTPRFP10586 1907 aa19.7■□□□□ 0.74
SSB-201ENST00000260956 SOWAHDA6NJG2 315 aa19.7■□□□□ 0.74
SSB-201ENST00000260956 BMP3P12645 472 aa19.7■□□□□ 0.74
SSB-201ENST00000260956 TRIM14Q14142 442 aa19.7■□□□□ 0.74
SSB-201ENST00000260956 ZYXQ15942 572 aaKnown RBP19.7■□□□□ 0.74
SSB-201ENST00000260956 SH3D19Q5HYK7 790 aa19.7■□□□□ 0.74
SSB-201ENST00000260956 ANKRD40Q6AI12 368 aa19.7■□□□□ 0.74
SSB-201ENST00000260956 CNGA4Q8IV77 575 aa19.7■□□□□ 0.74
SSB-201ENST00000260956 GJA10Q969M2 543 aa19.7■□□□□ 0.74
SSB-201ENST00000260956 DNAJC19Q96DA6 116 aa19.7■□□□□ 0.74
SSB-201ENST00000260956 SEMA6BQ9H3T3 888 aa19.7■□□□□ 0.74
SSB-201ENST00000260956 MRPL44Q9H9J2 332 aaKnown RBP19.7■□□□□ 0.74
SSB-201ENST00000260956 ZNF215Q9UL58 517 aaPredicted RBP19.7■□□□□ 0.74
SSB-201ENST00000260956 HSPA8P11142 646 aaKnown RBP19.69■□□□□ 0.74
SSB-201ENST00000260956 HOXA7P31268 230 aaPredicted RBP19.69■□□□□ 0.74
SSB-201ENST00000260956 SREBF1P36956 1147 aa19.69■□□□□ 0.74
SSB-201ENST00000260956 MCTP2Q6DN12 878 aa19.69■□□□□ 0.74
SSB-201ENST00000260956 GADL1Q6ZQY3 521 aa19.69■□□□□ 0.74
SSB-201ENST00000260956 PPFIBP1Q86W92 1011 aa19.69■□□□□ 0.74
SSB-201ENST00000260956 MB21D1Q8N884 522 aa19.69■□□□□ 0.74
SSB-201ENST00000260956 HPS3Q969F9 1004 aa19.69■□□□□ 0.74
SSB-201ENST00000260956 TRIM47Q96LD4 638 aa19.69■□□□□ 0.74
SSB-201ENST00000260956 SRRTQ9BXP5 876 aaKnown RBP19.69■□□□□ 0.74
SSB-201ENST00000260956 TTYH3Q9C0H2 523 aa19.69■□□□□ 0.74
SSB-201ENST00000260956 PDCL3Q9H2J4 239 aa19.69■□□□□ 0.74
SSB-201ENST00000260956 TMX2Q9Y320 296 aa19.69■□□□□ 0.74
SSB-201ENST00000260956 ADGRG1Q9Y653 693 aa19.69■□□□□ 0.74
SSB-201ENST00000260956 GOLGA6L9A6NEM1 432 aa19.68■□□□□ 0.74
SSB-201ENST00000260956 PDHXO00330 501 aa19.68■□□□□ 0.74
SSB-201ENST00000260956 TAL1P17542 331 aaPredicted RBP19.68■□□□□ 0.74
SSB-201ENST00000260956 CIITAP33076 1130 aa19.68■□□□□ 0.74
SSB-201ENST00000260956 SNAP25P60880 206 aa19.68■□□□□ 0.74
SSB-201ENST00000260956 ERVK-24P63145 666 aa19.68■□□□□ 0.74
SSB-201ENST00000260956 ARHGAP4P98171 946 aa19.68■□□□□ 0.74
SSB-201ENST00000260956 CRHR2Q13324 411 aa19.68■□□□□ 0.74
SSB-201ENST00000260956 KRT79Q5XKE5 535 aa19.68■□□□□ 0.74
SSB-201ENST00000260956 MTERF4Q7Z6M4 381 aaKnown RBP19.68■□□□□ 0.74
SSB-201ENST00000260956 FBXO11Q86XK2 927 aa19.68■□□□□ 0.74
SSB-201ENST00000260956 TEX2Q8IWB9 1127 aa19.68■□□□□ 0.74
SSB-201ENST00000260956 BEGAINQ9BUH8 593 aa19.68■□□□□ 0.74
SSB-201ENST00000260956 AS3MTQ9HBK9 375 aa19.68■□□□□ 0.74
SSB-201ENST00000260956 ABHD10Q9NUJ1 306 aa19.68■□□□□ 0.74
SSB-201ENST00000260956 PRR12Q9ULL5 1215 aa19.68■□□□□ 0.74
SSB-201ENST00000260956 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.68■□□□□ 0.742e-8■■□□□ 13.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms