RNA–Protein interactions for RNA: ENST00000255465.6

CCNA1-201, Transcript of cyclin A1, humanhuman

TSL 1 (best) BASIC

Gene CCNA1, Length 1,879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-201ENST00000255465 ATP11CQ8NB49 1132 aa12.99□□□□□ -0.33
CCNA1-201ENST00000255465 CAVIN3Q969G5 261 aa12.99□□□□□ -0.33
CCNA1-201ENST00000255465 CCDC51Q96ER9 411 aa12.99□□□□□ -0.33
CCNA1-201ENST00000255465 NAP1L3Q99457 506 aaPredicted RBP12.99□□□□□ -0.33
CCNA1-201ENST00000255465 PCMTD2Q9NV79 361 aa12.99□□□□□ -0.33
CCNA1-201ENST00000255465 GALNT8Q9NY28 637 aa12.99□□□□□ -0.33
CCNA1-201ENST00000255465 HMG20BQ9P0W2 317 aa12.99□□□□□ -0.33
CCNA1-201ENST00000255465 ADGRG1Q9Y653 693 aa12.99□□□□□ -0.33
CCNA1-201ENST00000255465 SALL1Q9NSC2 1324 aa12.99□□□□□ -0.33
CCNA1-201ENST00000255465 PALM3A6NDB9 673 aaPredicted RBP12.99□□□□□ -0.33
CCNA1-201ENST00000255465 HMGB1P1B2RPK0 211 aaPredicted RBP12.99□□□□□ -0.33
CCNA1-201ENST00000255465 WNT10BO00744 389 aa12.99□□□□□ -0.33
CCNA1-201ENST00000255465 N4BP3O15049 544 aa12.99□□□□□ -0.33
CCNA1-201ENST00000255465 MBD4O95243 580 aa12.99□□□□□ -0.33
CCNA1-201ENST00000255465 ITGBL1O95965 494 aaPredicted RBP12.99□□□□□ -0.33
CCNA1-201ENST00000255465 SERPINC1P01008 464 aa12.99□□□□□ -0.33
CCNA1-201ENST00000255465 BCRP11274 1271 aa12.99□□□□□ -0.33
CCNA1-201ENST00000255465 MCAMP43121 646 aa12.99□□□□□ -0.33
CCNA1-201ENST00000255465 SCARF1Q14162 830 aa12.99□□□□□ -0.33
CCNA1-201ENST00000255465 ZNF569Q5MCW4 686 aa12.99□□□□□ -0.33
CCNA1-201ENST00000255465 TTC39AQ5SRH9 613 aa12.99□□□□□ -0.33
CCNA1-201ENST00000255465 TOGARAM2Q6ZUX3 1019 aa12.99□□□□□ -0.33
CCNA1-201ENST00000255465 ELOA2Q8IYF1 753 aaPredicted RBP12.99□□□□□ -0.33
CCNA1-201ENST00000255465 TC2NQ8N9U0 490 aa12.99□□□□□ -0.33
CCNA1-201ENST00000255465 PHC3Q8NDX5 983 aa12.99□□□□□ -0.33
CCNA1-201ENST00000255465 KCNV2Q8TDN2 545 aa12.99□□□□□ -0.33
CCNA1-201ENST00000255465 RIN2Q8WYP3 895 aaPredicted RBP12.99□□□□□ -0.33
CCNA1-201ENST00000255465 NRDE2Q9H7Z3 1164 aa12.99□□□□□ -0.33
CCNA1-201ENST00000255465 ZNHIT6Q9NWK9 470 aaKnown RBP12.99□□□□□ -0.33
CCNA1-201ENST00000255465 AATFQ9NY61 560 aaKnown RBP eCLIP12.99□□□□□ -0.33
CCNA1-201ENST00000255465 ZNF148Q9UQR1 794 aa12.99□□□□□ -0.33
CCNA1-201ENST00000255465 SUGT1Q9Y2Z0 365 aa12.99□□□□□ -0.33
CCNA1-201ENST00000255465 ASTN2O75129 1339 aaPredicted RBP12.98□□□□□ -0.33
CCNA1-201ENST00000255465 EVI5O60447 810 aa12.98□□□□□ -0.33
CCNA1-201ENST00000255465 SSBP05455 408 aaKnown RBP eCLIP12.98□□□□□ -0.33
CCNA1-201ENST00000255465 FECHP22830 423 aa12.98□□□□□ -0.33
CCNA1-201ENST00000255465 EPHB4P54760 987 aa12.98□□□□□ -0.33
CCNA1-201ENST00000255465 CFAP100Q494V2 611 aa12.98□□□□□ -0.33
CCNA1-201ENST00000255465 SPECC1LQ69YQ0 1117 aa12.98□□□□□ -0.33
CCNA1-201ENST00000255465 PI16Q6UXB8 463 aa12.98□□□□□ -0.33
CCNA1-201ENST00000255465 FMR1NBQ8N0W7 255 aaPredicted RBP12.98□□□□□ -0.33
CCNA1-201ENST00000255465 CCDC63Q8NA47 563 aa12.98□□□□□ -0.33
CCNA1-201ENST00000255465 SPATA5Q8NB90 893 aa12.98□□□□□ -0.33
CCNA1-201ENST00000255465 NOA1Q8NC60 698 aaKnown RBP12.98□□□□□ -0.33
CCNA1-201ENST00000255465 MTMR14Q8NCE2 650 aa12.98□□□□□ -0.33
CCNA1-201ENST00000255465 CCT6BQ92526 530 aa12.98□□□□□ -0.33
CCNA1-201ENST00000255465 KCNN1Q92952 543 aa12.98□□□□□ -0.33
CCNA1-201ENST00000255465 HVCN1Q96D96 273 aa12.98□□□□□ -0.33
CCNA1-201ENST00000255465 NAF1Q96HR8 494 aaKnown RBP12.98□□□□□ -0.33
CCNA1-201ENST00000255465 ZBED3Q96IU2 234 aaPredicted RBP12.98□□□□□ -0.33
CCNA1-201ENST00000255465 ZNF512BQ96KM6 892 aaPredicted RBP12.98□□□□□ -0.33
CCNA1-201ENST00000255465 DHRS1Q96LJ7 313 aa12.98□□□□□ -0.33
CCNA1-201ENST00000255465 CORO1BQ9BR76 489 aa12.98□□□□□ -0.33
CCNA1-201ENST00000255465 LSG1Q9H089 658 aaKnown RBP12.98□□□□□ -0.33
CCNA1-201ENST00000255465 LRRC42Q9Y546 428 aa12.98□□□□□ -0.33
CCNA1-201ENST00000255465 PCDHAC2Q9Y5I4 1007 aa12.98□□□□□ -0.33
CCNA1-201ENST00000255465 BZW2Q9Y6E2 419 aaKnown RBP12.98□□□□□ -0.33
CCNA1-201ENST00000255465 DPPA5A6NC42 116 aa12.97□□□□□ -0.33
CCNA1-201ENST00000255465 GMNCA6NCL1 334 aa12.97□□□□□ -0.33
CCNA1-201ENST00000255465 PRDX5P30044 214 aa12.97□□□□□ -0.33
CCNA1-201ENST00000255465 HDLBPQ00341 1268 aaKnown RBP12.97□□□□□ -0.33
CCNA1-201ENST00000255465 DLGAP5Q15398 846 aa12.97□□□□□ -0.33
CCNA1-201ENST00000255465 DYDC1Q8WWB3 177 aa12.97□□□□□ -0.33
CCNA1-201ENST00000255465 KIFAP3Q92845 792 aa12.97□□□□□ -0.33
CCNA1-201ENST00000255465 ZNF653Q96CK0 615 aa12.97□□□□□ -0.33
CCNA1-201ENST00000255465 SMC6Q96SB8 1091 aa12.97□□□□□ -0.33
CCNA1-201ENST00000255465 BHMT2Q9H2M3 363 aa12.97□□□□□ -0.33
CCNA1-201ENST00000255465 MRPL44Q9H9J2 332 aaKnown RBP12.97□□□□□ -0.33
CCNA1-201ENST00000255465 GGA3Q9NZ52 723 aa12.97□□□□□ -0.33
CCNA1-201ENST00000255465 GOLGA8AA7E2F4 631 aa12.97□□□□□ -0.33
CCNA1-201ENST00000255465 BIRC5O15392 142 aa12.97□□□□□ -0.33
CCNA1-201ENST00000255465 PRPF3O43395 683 aaKnown RBP12.97□□□□□ -0.33
CCNA1-201ENST00000255465 KRT38O76015 456 aa12.97□□□□□ -0.33
CCNA1-201ENST00000255465 LARGE1O95461 756 aa12.97□□□□□ -0.33
CCNA1-201ENST00000255465 PAEPP09466 180 aa12.97□□□□□ -0.33
CCNA1-201ENST00000255465 PSMA5P28066 241 aa12.97□□□□□ -0.33
CCNA1-201ENST00000255465 ABL2P42684 1182 aa12.97□□□□□ -0.33
CCNA1-201ENST00000255465 ST3GAL1Q11201 340 aa12.97□□□□□ -0.33
CCNA1-201ENST00000255465 BTG3Q14201 252 aaPredicted RBP12.97□□□□□ -0.33
CCNA1-201ENST00000255465 KARSQ15046 597 aaKnown RBP12.97□□□□□ -0.33
CCNA1-201ENST00000255465 ANGEL2Q5VTE6 544 aaKnown RBP12.97□□□□□ -0.33
CCNA1-201ENST00000255465 HIBCHQ6NVY1 386 aaPredicted RBP12.97□□□□□ -0.33
CCNA1-201ENST00000255465 TRAPPC11Q7Z392 1133 aa12.97□□□□□ -0.33
CCNA1-201ENST00000255465 IRGQQ8WZA9 623 aa12.97□□□□□ -0.33
CCNA1-201ENST00000255465 NCSTNQ92542 709 aa12.97□□□□□ -0.33
CCNA1-201ENST00000255465 MRPS27Q92552 414 aaKnown RBP12.97□□□□□ -0.33
CCNA1-201ENST00000255465 DCPSQ96C86 337 aaKnown RBP12.97□□□□□ -0.33
CCNA1-201ENST00000255465 UBE2OQ9C0C9 1292 aaKnown RBP12.97□□□□□ -0.33
CCNA1-201ENST00000255465 NACA2Q9H009 215 aa12.97□□□□□ -0.33
CCNA1-201ENST00000255465 TSPYL2Q9H2G4 693 aaPredicted RBP12.97□□□□□ -0.33
CCNA1-201ENST00000255465 SERPINA10Q9UK55 444 aa12.97□□□□□ -0.33
CCNA1-201ENST00000255465 MAST3O60307 1309 aa12.96□□□□□ -0.33
CCNA1-201ENST00000255465 SPDYE2BA6NHP3 402 aa12.96□□□□□ -0.33
CCNA1-201ENST00000255465 DIAPH2O60879 1101 aa12.96□□□□□ -0.33
CCNA1-201ENST00000255465 LDHBP07195 334 aaKnown RBP12.96□□□□□ -0.33
CCNA1-201ENST00000255465 SPDYE6P0CI01 402 aa12.96□□□□□ -0.33
CCNA1-201ENST00000255465 TROVE2P10155 538 aaKnown RBP eCLIP12.96□□□□□ -0.33
CCNA1-201ENST00000255465 NR1D1P20393 614 aa12.96□□□□□ -0.33
CCNA1-201ENST00000255465 CRKP46108 304 aa12.96□□□□□ -0.33
CCNA1-201ENST00000255465 SULT2A1Q06520 285 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms