RNA–Protein interactions for RNA: ENST00000254810.8

H3F3B-201, Transcript of H3 histone family member 3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene H3F3B, Length 2,705 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-201ENST00000254810 FAM133AQ8N9E0 248 aa14.76□□□□□ -0.05
H3F3B-201ENST00000254810 USP38Q8NB14 1042 aa14.76□□□□□ -0.05
H3F3B-201ENST00000254810 PAGR1Q9BTK6 254 aa14.76□□□□□ -0.05
H3F3B-201ENST00000254810 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.76□□□□□ -0.05
H3F3B-201ENST00000254810 CENPHQ9H3R5 247 aa14.76□□□□□ -0.05
H3F3B-201ENST00000254810 TMBIM4Q9HC24 238 aa14.76□□□□□ -0.05
H3F3B-201ENST00000254810 PPANQ9NQ55 473 aaKnown RBP14.76□□□□□ -0.05
H3F3B-201ENST00000254810 CEP72Q9P209 647 aa14.76□□□□□ -0.05
H3F3B-201ENST00000254810 TMEM59LQ9UK28 342 aa14.76□□□□□ -0.05
H3F3B-201ENST00000254810 ATP6V0A2Q9Y487 856 aa14.76□□□□□ -0.05
H3F3B-201ENST00000254810 NFS1Q9Y697 457 aa14.76□□□□□ -0.05
H3F3B-201ENST00000254810 ABCB11O95342 1321 aa14.75□□□□□ -0.05
H3F3B-201ENST00000254810 HSD17B3P37058 310 aa14.75□□□□□ -0.05
H3F3B-201ENST00000254810 KCNQ4P56696 695 aa14.75□□□□□ -0.05
H3F3B-201ENST00000254810 CALCRLQ16602 461 aa14.75□□□□□ -0.05
H3F3B-201ENST00000254810 QPCTQ16769 361 aa14.75□□□□□ -0.05
H3F3B-201ENST00000254810 KIAA0753Q2KHM9 967 aa14.75□□□□□ -0.05
H3F3B-201ENST00000254810 CHADLQ6NUI6 762 aa14.75□□□□□ -0.05
H3F3B-201ENST00000254810 DZIP1Q86YF9 867 aaKnown RBP14.75□□□□□ -0.05
H3F3B-201ENST00000254810 TGFBRAP1Q8WUH2 860 aa14.75□□□□□ -0.05
H3F3B-201ENST00000254810 TSKSQ9UJT2 592 aa14.75□□□□□ -0.05
H3F3B-201ENST00000254810 E7EVH7 732 aa14.75□□□□□ -0.05
H3F3B-201ENST00000254810 TMOD1P28289 359 aa14.75□□□□□ -0.05
H3F3B-201ENST00000254810 CACNB1Q02641 598 aaPredicted RBP14.75□□□□□ -0.05
H3F3B-201ENST00000254810 RAPGEF1Q13905 1077 aa14.75□□□□□ -0.05
H3F3B-201ENST00000254810 SLC18A3Q16572 532 aa14.75□□□□□ -0.05
H3F3B-201ENST00000254810 MAPKAPK5Q8IW41 473 aa14.75□□□□□ -0.05
H3F3B-201ENST00000254810 DNAJC19Q96DA6 116 aa14.75□□□□□ -0.05
H3F3B-201ENST00000254810 SPZ1Q9BXG8 430 aa14.75□□□□□ -0.05
H3F3B-201ENST00000254810 AP1M1Q9BXS5 423 aa14.75□□□□□ -0.05
H3F3B-201ENST00000254810 C6orf50Q9HD87 102 aa14.75□□□□□ -0.05
H3F3B-201ENST00000254810 COL4A3BPQ9Y5P4 624 aa14.75□□□□□ -0.05
H3F3B-201ENST00000254810 SNED1Q8TER0 1413 aa14.74□□□□□ -0.05
H3F3B-201ENST00000254810 DCDC2CA8MYV0 355 aa14.74□□□□□ -0.05
H3F3B-201ENST00000254810 H0YHG0 523 aa14.74□□□□□ -0.05
H3F3B-201ENST00000254810 TRAF5O00463 557 aa14.74□□□□□ -0.05
H3F3B-201ENST00000254810 ACTN1P12814 892 aa14.74□□□□□ -0.05
H3F3B-201ENST00000254810 C6orf89Q6UWU4 347 aa14.74□□□□□ -0.05
H3F3B-201ENST00000254810 NELFCDQ8IXH7 590 aa14.74□□□□□ -0.05
H3F3B-201ENST00000254810 SNX29Q8TEQ0 813 aa14.74□□□□□ -0.05
H3F3B-201ENST00000254810 CABS1Q96KC9 395 aa14.74□□□□□ -0.05
H3F3B-201ENST00000254810 JPH2Q9BR39 696 aaPredicted RBP14.74□□□□□ -0.05
H3F3B-201ENST00000254810 CNOT8Q9UFF9 292 aaKnown RBP14.74□□□□□ -0.05
H3F3B-201ENST00000254810 CCDC88AQ3V6T2 1871 aa14.74□□□□□ -0.05
H3F3B-201ENST00000254810 NPHP3-ACAD11A0A0J9YXS1 232 aa14.74□□□□□ -0.05
H3F3B-201ENST00000254810 KCNK3O14649 394 aa14.74□□□□□ -0.05
H3F3B-201ENST00000254810 COASYQ13057 564 aa14.74□□□□□ -0.05
H3F3B-201ENST00000254810 SF3B2Q13435 895 aaKnown RBP14.74□□□□□ -0.05
H3F3B-201ENST00000254810 CCDC13Q8IYE1 715 aa14.74□□□□□ -0.05
H3F3B-201ENST00000254810 ZNF444Q8N0Y2 327 aaPredicted RBP14.74□□□□□ -0.05
H3F3B-201ENST00000254810 REXO1Q8N1G1 1221 aaKnown RBP14.74□□□□□ -0.05
H3F3B-201ENST00000254810 COA7Q96BR5 231 aa14.74□□□□□ -0.05
H3F3B-201ENST00000254810 RNF14Q9UBS8 474 aa14.74□□□□□ -0.05
H3F3B-201ENST00000254810 ROBO3Q96MS0 1386 aa14.74□□□□□ -0.05
H3F3B-201ENST00000254810 FAM107AO95990 144 aa14.73□□□□□ -0.05
H3F3B-201ENST00000254810 ZBTB48P10074 688 aaPredicted RBP14.73□□□□□ -0.05
H3F3B-201ENST00000254810 FXR2P51116 673 aaKnown RBP eCLIP14.73□□□□□ -0.05
H3F3B-201ENST00000254810 ACTN3Q08043 901 aaPredicted RBP14.73□□□□□ -0.05
H3F3B-201ENST00000254810 ZNF844Q08AG5 666 aa14.73□□□□□ -0.05
H3F3B-201ENST00000254810 CCDC40Q4G0X9 1142 aa14.73□□□□□ -0.05
H3F3B-201ENST00000254810 WHAMMQ8TF30 809 aa14.73□□□□□ -0.05
H3F3B-201ENST00000254810 CYFIP2Q96F07 1278 aa14.73□□□□□ -0.05
H3F3B-201ENST00000254810 EDEM3Q9BZQ6 932 aa14.73□□□□□ -0.05
H3F3B-201ENST00000254810 TAF1DQ9H5J8 278 aaPredicted RBP14.73□□□□□ -0.05
H3F3B-201ENST00000254810 STK17AQ9UEE5 414 aa14.73□□□□□ -0.05
H3F3B-201ENST00000254810 USP17L5A8MUK1 530 aa14.73□□□□□ -0.05
H3F3B-201ENST00000254810 HLTFQ14527 1009 aaKnown RBP eCLIP14.73□□□□□ -0.05
H3F3B-201ENST00000254810 TMEM119Q4V9L6 283 aa14.73□□□□□ -0.05
H3F3B-201ENST00000254810 CCDC91Q7Z6B0 441 aa14.73□□□□□ -0.05
H3F3B-201ENST00000254810 MYOCDQ8IZQ8 938 aa14.73□□□□□ -0.05
H3F3B-201ENST00000254810 CDK5RAP3Q96JB5 506 aa14.73□□□□□ -0.05
H3F3B-201ENST00000254810 VCPKMTQ9H867 229 aa14.73□□□□□ -0.05
H3F3B-201ENST00000254810 PLCB1Q9NQ66 1216 aa14.73□□□□□ -0.05
H3F3B-201ENST00000254810 SLC12A6Q9UHW9 1150 aa14.73□□□□□ -0.05
H3F3B-201ENST00000254810 MAST2Q6P0Q8 1798 aa14.73□□□□□ -0.05
H3F3B-201ENST00000254810 FRMPD2Q68DX3 1309 aaPredicted RBP14.73□□□□□ -0.05
H3F3B-201ENST00000254810 A6NNZ2 444 aa14.72□□□□□ -0.05
H3F3B-201ENST00000254810 HMGB1P1B2RPK0 211 aaPredicted RBP14.72□□□□□ -0.05
H3F3B-201ENST00000254810 ITGA4P13612 1032 aa14.72□□□□□ -0.05
H3F3B-201ENST00000254810 RPS8P62241 208 aaKnown RBP14.72□□□□□ -0.05
H3F3B-201ENST00000254810 BYSLQ13895 437 aaKnown RBP14.72□□□□□ -0.05
H3F3B-201ENST00000254810 TUBB8Q3ZCM7 444 aa14.72□□□□□ -0.05
H3F3B-201ENST00000254810 YTHDF3Q7Z739 585 aaKnown RBP14.72□□□□□ -0.05
H3F3B-201ENST00000254810 ISCUQ9H1K1 167 aa14.72□□□□□ -0.05
H3F3B-201ENST00000254810 GANQ9H2C0 597 aa14.72□□□□□ -0.05
H3F3B-201ENST00000254810 MYH4Q9Y623 1939 aa14.72□□□□□ -0.05
H3F3B-201ENST00000254810 IRS2Q9Y4H2 1338 aa14.72□□□□□ -0.05
H3F3B-201ENST00000254810 FGFR1OPO95684 399 aaKnown RBP14.72□□□□□ -0.05
H3F3B-201ENST00000254810 GNA11P29992 359 aa14.72□□□□□ -0.05
H3F3B-201ENST00000254810 PTK2Q05397 1052 aa14.72□□□□□ -0.05
H3F3B-201ENST00000254810 KLHL30Q0D2K2 578 aa14.72□□□□□ -0.05
H3F3B-201ENST00000254810 DPY19L2P1Q6NXN4 242 aa14.72□□□□□ -0.05
H3F3B-201ENST00000254810 ZNF571Q7Z3V5 609 aaPredicted RBP14.72□□□□□ -0.05
H3F3B-201ENST00000254810 TRIM59Q8IWR1 403 aa14.72□□□□□ -0.05
H3F3B-201ENST00000254810 SYN2Q92777 582 aaPredicted RBP14.72□□□□□ -0.05
H3F3B-201ENST00000254810 DDX47Q9H0S4 455 aaKnown RBP14.72□□□□□ -0.05
H3F3B-201ENST00000254810 DDX20Q9UHI6 824 aaKnown RBP14.72□□□□□ -0.05
H3F3B-201ENST00000254810 RASSF9O75901 435 aa14.72□□□□□ -0.05
H3F3B-201ENST00000254810 FKBP3Q00688 224 aaKnown RBP14.72□□□□□ -0.05
H3F3B-201ENST00000254810 SOGA3Q5TF21 947 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms