RNA–Protein interactions for RNA: ENST00000253754.7

PDLIM4-201, Transcript of PDZ and LIM domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM4, Length 2,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-201ENST00000253754 OPLAHO14841 1288 aa20.77■□□□□ 0.92
PDLIM4-201ENST00000253754 TBC1D12O60347 775 aa20.77■□□□□ 0.92
PDLIM4-201ENST00000253754 PLA2G4BP0C869 781 aa20.77■□□□□ 0.92
PDLIM4-201ENST00000253754 POTEIP0CG38 1075 aa20.77■□□□□ 0.92
PDLIM4-201ENST00000253754 CYP3A7P24462 503 aa20.77■□□□□ 0.92
PDLIM4-201ENST00000253754 TNFAIP1Q13829 316 aa20.77■□□□□ 0.92
PDLIM4-201ENST00000253754 MEA1Q16626 185 aa20.77■□□□□ 0.92
PDLIM4-201ENST00000253754 TSR1Q2NL82 804 aaKnown RBP20.77■□□□□ 0.92
PDLIM4-201ENST00000253754 VWA3BQ502W6 1294 aa20.77■□□□□ 0.92
PDLIM4-201ENST00000253754 HYIQ5T013 277 aa20.77■□□□□ 0.92
PDLIM4-201ENST00000253754 POTEGQ6S5H5 508 aa20.77■□□□□ 0.92
PDLIM4-201ENST00000253754 POTEEQ6S8J3 1075 aa20.77■□□□□ 0.92
PDLIM4-201ENST00000253754 DICER1Q9UPY3 1922 aaKnown RBP20.77■□□□□ 0.92
PDLIM4-201ENST00000253754 CTAGE9A4FU28 777 aa20.76■□□□□ 0.91
PDLIM4-201ENST00000253754 FAM86B1E9PN63 330 aa20.76■□□□□ 0.91
PDLIM4-201ENST00000253754 FAM86B2P0C5J1 330 aa20.76■□□□□ 0.91
PDLIM4-201ENST00000253754 FKBP15Q5T1M5 1219 aa20.76■□□□□ 0.91
PDLIM4-201ENST00000253754 ETNPPLQ8TBG4 499 aa20.76■□□□□ 0.91
PDLIM4-201ENST00000253754 MBOAT7Q96N66 472 aa20.76■□□□□ 0.91
PDLIM4-201ENST00000253754 ERGIC2Q96RQ1 377 aa20.76■□□□□ 0.91
PDLIM4-201ENST00000253754 NDST4Q9H3R1 872 aa20.76■□□□□ 0.91
PDLIM4-201ENST00000253754 KDM3AQ9Y4C1 1321 aa20.76■□□□□ 0.91
PDLIM4-201ENST00000253754 ZSCAN20P17040 1043 aaPredicted RBP20.76■□□□□ 0.91
PDLIM4-201ENST00000253754 ZBED6P86452 979 aa20.76■□□□□ 0.91
PDLIM4-201ENST00000253754 AP3B2Q13367 1082 aa20.76■□□□□ 0.91
PDLIM4-201ENST00000253754 GPBP1Q86WP2 473 aa20.76■□□□□ 0.91
PDLIM4-201ENST00000253754 CCDC155Q8N6L0 562 aa20.76■□□□□ 0.91
PDLIM4-201ENST00000253754 ACER1Q8TDN7 264 aa20.76■□□□□ 0.91
PDLIM4-201ENST00000253754 LENG9Q96B70 501 aa20.76■□□□□ 0.91
PDLIM4-201ENST00000253754 NAP1L4Q99733 375 aaKnown RBP20.76■□□□□ 0.91
PDLIM4-201ENST00000253754 LRRC27Q9C0I9 530 aa20.76■□□□□ 0.91
PDLIM4-201ENST00000253754 NT5C3AQ9H0P0 336 aa20.76■□□□□ 0.91
PDLIM4-201ENST00000253754 FAM207AQ9NSI2 230 aaPredicted RBP20.76■□□□□ 0.91
PDLIM4-201ENST00000253754 MEIS1O00470 390 aa20.75■□□□□ 0.91
PDLIM4-201ENST00000253754 LRRC63Q05C16 580 aa20.75■□□□□ 0.91
PDLIM4-201ENST00000253754 SPIRE1Q08AE8 756 aa20.75■□□□□ 0.91
PDLIM4-201ENST00000253754 FAM26FQ5R3K3 315 aa20.75■□□□□ 0.91
PDLIM4-201ENST00000253754 NELFCDQ8IXH7 590 aa20.75■□□□□ 0.91
PDLIM4-201ENST00000253754 MYOCDQ8IZQ8 938 aa20.75■□□□□ 0.91
PDLIM4-201ENST00000253754 CYP2W1Q8TAV3 490 aa20.75■□□□□ 0.91
PDLIM4-201ENST00000253754 NUP58Q9BVL2 599 aa20.75■□□□□ 0.91
PDLIM4-201ENST00000253754 NHEJ1Q9H9Q4 299 aaPredicted RBP20.75■□□□□ 0.91
PDLIM4-201ENST00000253754 CDC23Q9UJX2 597 aa20.75■□□□□ 0.91
PDLIM4-201ENST00000253754 ZBTB21Q9ULJ3 1066 aa20.75■□□□□ 0.91
PDLIM4-201ENST00000253754 SEC31AO94979 1220 aaKnown RBP20.75■□□□□ 0.91
PDLIM4-201ENST00000253754 NCAPH2Q6IBW4 605 aa20.75■□□□□ 0.91
PDLIM4-201ENST00000253754 GPC2Q8N158 579 aa20.75■□□□□ 0.91
PDLIM4-201ENST00000253754 RETREG2Q8NC44 543 aa20.75■□□□□ 0.91
PDLIM4-201ENST00000253754 TEPSINQ96N21 525 aa20.75■□□□□ 0.91
PDLIM4-201ENST00000253754 NAPGQ99747 312 aaPredicted RBP20.75■□□□□ 0.91
PDLIM4-201ENST00000253754 PRR12Q9ULL5 1215 aa20.75■□□□□ 0.91
PDLIM4-201ENST00000253754 SIK3Q9Y2K2 1263 aa20.75■□□□□ 0.91
PDLIM4-201ENST00000253754 RCCD1A6NED2 376 aa20.74■□□□□ 0.91
PDLIM4-201ENST00000253754 SPDYE3A6NKU9 549 aa20.74■□□□□ 0.91
PDLIM4-201ENST00000253754 PLEKP08567 350 aaPredicted RBP20.74■□□□□ 0.91
PDLIM4-201ENST00000253754 CYP11B2P19099 503 aa20.74■□□□□ 0.91
PDLIM4-201ENST00000253754 PSMC6P62333 389 aa20.74■□□□□ 0.91
PDLIM4-201ENST00000253754 PSMD2Q13200 908 aa20.74■□□□□ 0.91
PDLIM4-201ENST00000253754 DEFB129Q9H1M3 183 aa20.74■□□□□ 0.91
PDLIM4-201ENST00000253754 GPRC5DQ9NZD1 345 aa20.74■□□□□ 0.91
PDLIM4-201ENST00000253754 CAP2P40123 477 aa20.74■□□□□ 0.91
PDLIM4-201ENST00000253754 CHMP4BP1P59074 171 aa20.74■□□□□ 0.91
PDLIM4-201ENST00000253754 MAN2A1Q16706 1144 aa20.74■□□□□ 0.91
PDLIM4-201ENST00000253754 ZCWPW2Q504Y3 356 aa20.74■□□□□ 0.91
PDLIM4-201ENST00000253754 CATSPER3Q86XQ3 398 aa20.74■□□□□ 0.91
PDLIM4-201ENST00000253754 GOLGA1Q92805 767 aa20.74■□□□□ 0.91
PDLIM4-201ENST00000253754 RNF181Q9P0P0 153 aa20.74■□□□□ 0.91
PDLIM4-201ENST00000253754 PCDHA2Q9Y5H9 948 aa20.74■□□□□ 0.91
PDLIM4-201ENST00000253754 CYP27A1Q02318 531 aa20.73■□□□□ 0.91
PDLIM4-201ENST00000253754 ARSHQ5FYA8 562 aa20.73■□□□□ 0.91
PDLIM4-201ENST00000253754 SLC30A10Q6XR72 485 aa20.73■□□□□ 0.91
PDLIM4-201ENST00000253754 SRGAP1Q7Z6B7 1085 aa20.73■□□□□ 0.91
PDLIM4-201ENST00000253754 SLFN12Q8IYM2 578 aa20.73■□□□□ 0.91
PDLIM4-201ENST00000253754 TRPM4Q8TD43 1214 aa20.73■□□□□ 0.91
PDLIM4-201ENST00000253754 ZHX3Q9H4I2 956 aa20.73■□□□□ 0.91
PDLIM4-201ENST00000253754 ZNHIT6Q9NWK9 470 aaKnown RBP20.73■□□□□ 0.91
PDLIM4-201ENST00000253754 FHOD1Q9Y613 1164 aa20.73■□□□□ 0.91
PDLIM4-201ENST00000253754 SREBF1P36956 1147 aa20.73■□□□□ 0.91
PDLIM4-201ENST00000253754 EPS15P42566 896 aa20.73■□□□□ 0.91
PDLIM4-201ENST00000253754 MAP3K10Q02779 954 aa20.73■□□□□ 0.91
PDLIM4-201ENST00000253754 HERC4Q5GLZ8 1057 aaPredicted RBP20.73■□□□□ 0.91
PDLIM4-201ENST00000253754 TSG101Q99816 390 aa20.73■□□□□ 0.91
PDLIM4-201ENST00000253754 LACRTQ9GZZ8 138 aa20.73■□□□□ 0.91
PDLIM4-201ENST00000253754 MMRN2Q9H8L6 949 aa20.73■□□□□ 0.91
PDLIM4-201ENST00000253754 ARHGEF10LQ9HCE6 1279 aa20.73■□□□□ 0.91
PDLIM4-201ENST00000253754 BMP2KQ9NSY1 1161 aaPredicted RBP20.73■□□□□ 0.91
PDLIM4-201ENST00000253754 FAM53CQ9NYF3 392 aa20.73■□□□□ 0.91
PDLIM4-201ENST00000253754 ENC1O14682 589 aa20.72■□□□□ 0.91
PDLIM4-201ENST00000253754 SLC12A3P55017 1021 aa20.72■□□□□ 0.91
PDLIM4-201ENST00000253754 CCDC122Q5T0U0 273 aa20.72■□□□□ 0.91
PDLIM4-201ENST00000253754 BTNL9Q6UXG8 535 aa20.72■□□□□ 0.91
PDLIM4-201ENST00000253754 SMAP1Q8IYB5 467 aaPredicted RBP20.72■□□□□ 0.91
PDLIM4-201ENST00000253754 GPR161Q8N6U8 529 aaKnown RBP20.72■□□□□ 0.91
PDLIM4-201ENST00000253754 PARD6BQ9BYG5 372 aa20.72■□□□□ 0.91
PDLIM4-201ENST00000253754 A0A1W2PQJ5 194 aa20.71■□□□□ 0.91
PDLIM4-201ENST00000253754 TRAF5O00463 557 aa20.71■□□□□ 0.91
PDLIM4-201ENST00000253754 PABPC4Q13310 644 aaKnown RBP eCLIP20.71■□□□□ 0.914e-7■■■■□ 24.4
PDLIM4-201ENST00000253754 ZYXQ15942 572 aaKnown RBP20.71■□□□□ 0.91
PDLIM4-201ENST00000253754 Q4G0T1 1027 aa20.71■□□□□ 0.91
PDLIM4-201ENST00000253754 FIGNQ5HY92 759 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms