RNA–Protein interactions for RNA: ENST00000252622.14

LSM7-201, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM7, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-201ENST00000252622 TIMP1P01033 207 aa28.62■■■□□ 2.17
LSM7-201ENST00000252622 CYP3A4P08684 503 aa28.62■■■□□ 2.17
LSM7-201ENST00000252622 ZNF286BP0CG31 522 aa28.62■■■□□ 2.17
LSM7-201ENST00000252622 FAM47CQ5HY64 1035 aa28.62■■■□□ 2.17
LSM7-201ENST00000252622 GALNT17Q6IS24 598 aa28.62■■■□□ 2.17
LSM7-201ENST00000252622 NIPA1Q7RTP0 329 aa28.62■■■□□ 2.17
LSM7-201ENST00000252622 AIFM3Q96NN9 605 aa28.62■■■□□ 2.17
LSM7-201ENST00000252622 GPR20Q99678 358 aa28.62■■■□□ 2.17
LSM7-201ENST00000252622 UPF2Q9HAU5 1272 aaKnown RBP28.62■■■□□ 2.17
LSM7-201ENST00000252622 PCDHA4Q9UN74 947 aa28.62■■■□□ 2.17
LSM7-201ENST00000252622 HAS3O00219 553 aa28.61■■■□□ 2.17
LSM7-201ENST00000252622 SUPT20HL2P0C7V6 817 aa28.61■■■□□ 2.17
LSM7-201ENST00000252622 PSEN2P49810 448 aa28.61■■■□□ 2.17
LSM7-201ENST00000252622 DAGLBQ8NCG7 672 aa28.61■■■□□ 2.17
LSM7-201ENST00000252622 RASGRP4Q8TDF6 673 aa28.61■■■□□ 2.17
LSM7-201ENST00000252622 KCNH7Q9NS40 1196 aa28.61■■■□□ 2.17
LSM7-201ENST00000252622 TRIOBPQ9H2D6 2365 aa28.6■■■□□ 2.17
LSM7-201ENST00000252622 MEIS1O00470 390 aa28.6■■■□□ 2.17
LSM7-201ENST00000252622 MFSD10Q14728 455 aa28.6■■■□□ 2.17
LSM7-201ENST00000252622 TDHQ8IZJ6 230 aa28.6■■■□□ 2.17
LSM7-201ENST00000252622 CYP2W1Q8TAV3 490 aa28.6■■■□□ 2.17
LSM7-201ENST00000252622 C16orf70Q9BSU1 422 aa28.6■■■□□ 2.17
LSM7-201ENST00000252622 TRMT13Q9NUP7 481 aaKnown RBP28.6■■■□□ 2.17
LSM7-201ENST00000252622 LIMCH1Q9UPQ0 1083 aa28.6■■■□□ 2.17
LSM7-201ENST00000252622 LGALS2P05162 132 aa28.59■■■□□ 2.17
LSM7-201ENST00000252622 ZNF76P36508 570 aa28.59■■■□□ 2.17
LSM7-201ENST00000252622 WASF1Q92558 559 aa28.59■■■□□ 2.17
LSM7-201ENST00000252622 ORC3Q9UBD5 711 aaPredicted RBP28.59■■■□□ 2.17
LSM7-201ENST00000252622 DOCK5Q9H7D0 1870 aa28.58■■■□□ 2.17
LSM7-201ENST00000252622 XBP1P17861 261 aa28.58■■■□□ 2.17
LSM7-201ENST00000252622 CHMP4BP1P59074 171 aa28.58■■■□□ 2.17
LSM7-201ENST00000252622 NPY5RQ15761 445 aa28.58■■■□□ 2.17
LSM7-201ENST00000252622 KIAA0753Q2KHM9 967 aa28.58■■■□□ 2.17
LSM7-201ENST00000252622 MFSD5Q6N075 450 aa28.58■■■□□ 2.17
LSM7-201ENST00000252622 BLIDQ8IZY5 108 aa28.58■■■□□ 2.17
LSM7-201ENST00000252622 NSUN7Q8NE18 718 aaKnown RBP28.58■■■□□ 2.17
LSM7-201ENST00000252622 NOC4LQ9BVI4 516 aaKnown RBP28.58■■■□□ 2.17
LSM7-201ENST00000252622 HIPK3Q9H422 1215 aa28.58■■■□□ 2.17
LSM7-201ENST00000252622 PKD2L1Q9P0L9 805 aa28.58■■■□□ 2.17
LSM7-201ENST00000252622 NFASCO94856 1347 aa28.58■■■□□ 2.17
LSM7-201ENST00000252622 FAM86B1E9PN63 330 aa28.57■■■□□ 2.16
LSM7-201ENST00000252622 FAM86B2P0C5J1 330 aa28.57■■■□□ 2.16
LSM7-201ENST00000252622 ARP10275 920 aa28.57■■■□□ 2.16
LSM7-201ENST00000252622 FPGSQ05932 587 aa28.57■■■□□ 2.16
LSM7-201ENST00000252622 RABEP1Q15276 862 aa28.57■■■□□ 2.16
LSM7-201ENST00000252622 C7orf31Q8N865 590 aa28.57■■■□□ 2.16
LSM7-201ENST00000252622 PPP1R13LQ8WUF5 828 aa28.57■■■□□ 2.16
LSM7-201ENST00000252622 PPP1R12CQ9BZL4 782 aa28.57■■■□□ 2.16
LSM7-201ENST00000252622 AGO4Q9HCK5 861 aaKnown RBP28.57■■■□□ 2.16
LSM7-201ENST00000252622 GTF2IRD1Q9UHL9 959 aa28.57■■■□□ 2.16
LSM7-201ENST00000252622 IGLV3-22A0A075B6J6 115 aa28.56■■■□□ 2.16
LSM7-201ENST00000252622 M0R2N6 131 aa28.56■■■□□ 2.16
LSM7-201ENST00000252622 FDPSP14324 419 aaKnown RBP28.56■■■□□ 2.16
LSM7-201ENST00000252622 CIITAP33076 1130 aa28.56■■■□□ 2.16
LSM7-201ENST00000252622 SETQ01105 290 aaPredicted RBP28.56■■■□□ 2.16
LSM7-201ENST00000252622 SP4Q02446 784 aa28.56■■■□□ 2.16
LSM7-201ENST00000252622 ST3GAL1Q11201 340 aa28.56■■■□□ 2.16
LSM7-201ENST00000252622 IL27Q8NEV9 243 aa28.56■■■□□ 2.16
LSM7-201ENST00000252622 ALG1Q9BT22 464 aa28.56■■■□□ 2.16
LSM7-201ENST00000252622 PHF20Q9BVI0 1012 aa28.56■■■□□ 2.16
LSM7-201ENST00000252622 JPH1Q9HDC5 661 aaPredicted RBP28.56■■■□□ 2.16
LSM7-201ENST00000252622 TELO2Q9Y4R8 837 aa28.56■■■□□ 2.16
LSM7-201ENST00000252622 GTF3C3Q9Y5Q9 886 aa28.56■■■□□ 2.16
LSM7-201ENST00000252622 H3BRB1 525 aa28.55■■■□□ 2.16
LSM7-201ENST00000252622 PLA2G4DQ86XP0 818 aa28.55■■■□□ 2.16
LSM7-201ENST00000252622 SDF4Q9BRK5 362 aa28.55■■■□□ 2.16
LSM7-201ENST00000252622 TUT1Q9H6E5 874 aaKnown RBP28.55■■■□□ 2.16
LSM7-201ENST00000252622 HDAC6Q9UBN7 1215 aa28.55■■■□□ 2.16
LSM7-201ENST00000252622 KCNJ14Q9UNX9 436 aa28.55■■■□□ 2.16
LSM7-201ENST00000252622 CYP2C9P11712 490 aa28.54■■■□□ 2.16
LSM7-201ENST00000252622 ITGB3BPQ13352 177 aaPredicted RBP28.54■■■□□ 2.16
LSM7-201ENST00000252622 GDF6Q6KF10 455 aaPredicted RBP28.54■■■□□ 2.16
LSM7-201ENST00000252622 TMEM199Q8N511 208 aa28.54■■■□□ 2.16
LSM7-201ENST00000252622 SEPT1Q8WYJ6 367 aa28.54■■■□□ 2.16
LSM7-201ENST00000252622 ZSCAN31Q96LW9 406 aaPredicted RBP28.54■■■□□ 2.16
LSM7-201ENST00000252622 SLC9A2Q9UBY0 812 aa28.54■■■□□ 2.16
LSM7-201ENST00000252622 ZNF215Q9UL58 517 aaPredicted RBP28.54■■■□□ 2.16
LSM7-201ENST00000252622 NOD1Q9Y239 953 aa28.54■■■□□ 2.16
LSM7-201ENST00000252622 UMODL1Q5DID0 1318 aa28.53■■■□□ 2.16
LSM7-201ENST00000252622 GSTTP1A0A1W2PQM5 241 aa28.53■■■□□ 2.16
LSM7-201ENST00000252622 CYP2C18P33260 490 aa28.53■■■□□ 2.16
LSM7-201ENST00000252622 TCF7P36402 384 aaPredicted RBP28.53■■■□□ 2.16
LSM7-201ENST00000252622 USP11P51784 963 aa28.53■■■□□ 2.16
LSM7-201ENST00000252622 PTGISQ16647 500 aa28.53■■■□□ 2.16
LSM7-201ENST00000252622 SH2B1Q9NRF2 756 aaPredicted RBP28.53■■■□□ 2.16
LSM7-201ENST00000252622 DTNBO60941 627 aa28.52■■■□□ 2.16
LSM7-201ENST00000252622 FXR1P51114 621 aaKnown RBP eCLIP28.52■■■□□ 2.16
LSM7-201ENST00000252622 PPIGQ13427 754 aaKnown RBP eCLIP28.52■■■□□ 2.167e-10■□□□□ 8.5
LSM7-201ENST00000252622 UTP14CQ5TAP6 766 aaKnown RBP28.52■■■□□ 2.16
LSM7-201ENST00000252622 KRT25Q7Z3Z0 450 aa28.52■■■□□ 2.16
LSM7-201ENST00000252622 TRIM50Q86XT4 487 aa28.52■■■□□ 2.16
LSM7-201ENST00000252622 TBCKQ8TEA7 893 aa28.52■■■□□ 2.16
LSM7-201ENST00000252622 TBC1D32Q96NH3 1257 aa28.52■■■□□ 2.16
LSM7-201ENST00000252622 CTAGE1Q96RT6 745 aa28.52■■■□□ 2.16
LSM7-201ENST00000252622 EDIL3O43854 480 aa28.51■■■□□ 2.15
LSM7-201ENST00000252622 JAK2O60674 1132 aa28.51■■■□□ 2.15
LSM7-201ENST00000252622 EPHB4P54760 987 aa28.51■■■□□ 2.15
LSM7-201ENST00000252622 LRIT3Q3SXY7 679 aa28.51■■■□□ 2.15
LSM7-201ENST00000252622 LLPHQ9BRT6 129 aaKnown RBP28.51■■■□□ 2.15
LSM7-201ENST00000252622 WNT8AQ9H1J5 351 aa28.51■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms