RNA–Protein interactions for RNA: ENST00000249910.5

MBD4-201, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MBD4, Length 2,470 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-201ENST00000249910 RANBP17Q9H2T7 1088 aaKnown RBP16.38■□□□□ 0.21
MBD4-201ENST00000249910 BMP2KQ9NSY1 1161 aaPredicted RBP16.38■□□□□ 0.21
MBD4-201ENST00000249910 IGLV3-22A0A075B6J6 115 aa16.38■□□□□ 0.21
MBD4-201ENST00000249910 GCOM1H8Y6P7 765 aaPredicted RBP16.38■□□□□ 0.21
MBD4-201ENST00000249910 KRT18P05783 430 aaKnown RBP16.38■□□□□ 0.21
MBD4-201ENST00000249910 POLR2MP0CAP2 368 aa16.38■□□□□ 0.21
MBD4-201ENST00000249910 FAM26FQ5R3K3 315 aa16.38■□□□□ 0.21
MBD4-201ENST00000249910 MOXD1Q6UVY6 613 aa16.38■□□□□ 0.21
MBD4-201ENST00000249910 CCDC155Q8N6L0 562 aa16.38■□□□□ 0.21
MBD4-201ENST00000249910 HOMER2Q9NSB8 354 aa16.38■□□□□ 0.21
MBD4-201ENST00000249910 KDM3AQ9Y4C1 1321 aa16.37■□□□□ 0.21
MBD4-201ENST00000249910 PIK3CDO00329 1044 aa16.37■□□□□ 0.21
MBD4-201ENST00000249910 GMPSP49915 693 aaPredicted RBP16.37■□□□□ 0.21
MBD4-201ENST00000249910 DNM2P50570 870 aa16.37■□□□□ 0.21
MBD4-201ENST00000249910 SLC12A3P55017 1021 aa16.37■□□□□ 0.21
MBD4-201ENST00000249910 PIGOQ8TEQ8 1089 aa16.37■□□□□ 0.21
MBD4-201ENST00000249910 SLF1Q9BQI6 1058 aa16.37■□□□□ 0.21
MBD4-201ENST00000249910 LUC7L2Q9Y383 392 aaKnown RBP16.37■□□□□ 0.21
MBD4-201ENST00000249910 ARFGEF1Q9Y6D6 1849 aa16.37■□□□□ 0.21
MBD4-201ENST00000249910 CIITAP33076 1130 aa16.37■□□□□ 0.21
MBD4-201ENST00000249910 MYOCDQ8IZQ8 938 aa16.37■□□□□ 0.21
MBD4-201ENST00000249910 NAA15Q9BXJ9 866 aaKnown RBP16.37■□□□□ 0.21
MBD4-201ENST00000249910 BHMT2Q9H2M3 363 aa16.37■□□□□ 0.21
MBD4-201ENST00000249910 L2HGDHQ9H9P8 463 aa16.37■□□□□ 0.21
MBD4-201ENST00000249910 VAV3Q9UKW4 847 aa16.37■□□□□ 0.21
MBD4-201ENST00000249910 SYNPO2Q9UMS6 1093 aa16.37■□□□□ 0.21
MBD4-201ENST00000249910 TFR2Q9UP52 801 aa16.37■□□□□ 0.21
MBD4-201ENST00000249910 RPA1P27694 616 aa16.36■□□□□ 0.21
MBD4-201ENST00000249910 CASP5P51878 434 aa16.36■□□□□ 0.21
MBD4-201ENST00000249910 CTTNQ14247 550 aaKnown RBP16.36■□□□□ 0.21
MBD4-201ENST00000249910 HAUS3Q68CZ6 603 aa16.36■□□□□ 0.21
MBD4-201ENST00000249910 NOC3LQ8WTT2 800 aaKnown RBP16.36■□□□□ 0.21
MBD4-201ENST00000249910 MTFR1LQ9H019 292 aa16.36■□□□□ 0.21
MBD4-201ENST00000249910 DEFB129Q9H1M3 183 aa16.36■□□□□ 0.21
MBD4-201ENST00000249910 CNOT7Q9UIV1 285 aaKnown RBP16.36■□□□□ 0.21
MBD4-201ENST00000249910 A0A1W2PQC6 194 aa16.36■□□□□ 0.21
MBD4-201ENST00000249910 SFI1A8K8P3 1242 aa16.36■□□□□ 0.21
MBD4-201ENST00000249910 NFIBO00712 420 aa16.36■□□□□ 0.21
MBD4-201ENST00000249910 SLU7O95391 586 aaKnown RBP16.36■□□□□ 0.21
MBD4-201ENST00000249910 ZSCAN20P17040 1043 aaPredicted RBP16.36■□□□□ 0.21
MBD4-201ENST00000249910 TNIP1Q15025 636 aa16.36■□□□□ 0.21
MBD4-201ENST00000249910 COBLL1Q53SF7 1204 aa16.36■□□□□ 0.21
MBD4-201ENST00000249910 NBPF12Q5TAG4 269 aaPredicted RBP16.36■□□□□ 0.21
MBD4-201ENST00000249910 WDR59Q6PJI9 974 aa16.36■□□□□ 0.21
MBD4-201ENST00000249910 OR8K1Q8NGG5 319 aa16.36■□□□□ 0.21
MBD4-201ENST00000249910 FAM20AQ96MK3 541 aa16.36■□□□□ 0.21
MBD4-201ENST00000249910 LRRC27Q9C0I9 530 aa16.36■□□□□ 0.21
MBD4-201ENST00000249910 PRDM10Q9NQV6 1147 aa16.36■□□□□ 0.21
MBD4-201ENST00000249910 PKD2L1Q9P0L9 805 aa16.36■□□□□ 0.21
MBD4-201ENST00000249910 HACL1Q9UJ83 578 aa16.36■□□□□ 0.21
MBD4-201ENST00000249910 DNM3Q9UQ16 869 aa16.36■□□□□ 0.21
MBD4-201ENST00000249910 PCDHA2Q9Y5H9 948 aa16.36■□□□□ 0.21
MBD4-201ENST00000249910 RSPH10B2B2RC85 870 aa16.35■□□□□ 0.21
MBD4-201ENST00000249910 TRAF5O00463 557 aa16.35■□□□□ 0.21
MBD4-201ENST00000249910 TBX3O15119 743 aa16.35■□□□□ 0.21
MBD4-201ENST00000249910 EPHB6O15197 1021 aa16.35■□□□□ 0.21
MBD4-201ENST00000249910 RSPH10BP0C881 870 aa16.35■□□□□ 0.21
MBD4-201ENST00000249910 MAP3K10Q02779 954 aa16.35■□□□□ 0.21
MBD4-201ENST00000249910 LRRC55Q6ZSA7 311 aa16.35■□□□□ 0.21
MBD4-201ENST00000249910 TMTC1Q8IUR5 882 aa16.35■□□□□ 0.21
MBD4-201ENST00000249910 EIF2AK1Q9BQI3 630 aaKnown RBP16.35■□□□□ 0.21
MBD4-201ENST00000249910 FAM207AQ9NSI2 230 aaPredicted RBP16.35■□□□□ 0.21
MBD4-201ENST00000249910 PSME4Q14997 1843 aa16.35■□□□□ 0.21
MBD4-201ENST00000249910 ARP10275 920 aa16.35■□□□□ 0.21
MBD4-201ENST00000249910 ELF2Q15723 593 aa16.35■□□□□ 0.21
MBD4-201ENST00000249910 ERCC6LQ2NKX8 1250 aa16.35■□□□□ 0.21
MBD4-201ENST00000249910 CYP26C1Q6V0L0 522 aa16.35■□□□□ 0.21
MBD4-201ENST00000249910 FAM114A1Q8IWE2 563 aa16.35■□□□□ 0.21
MBD4-201ENST00000249910 TPH2Q8IWU9 490 aa16.35■□□□□ 0.21
MBD4-201ENST00000249910 SCFD1Q8WVM8 642 aa16.35■□□□□ 0.21
MBD4-201ENST00000249910 ANKRD7Q92527 254 aa16.35■□□□□ 0.21
MBD4-201ENST00000249910 CCDC51Q96ER9 411 aa16.35■□□□□ 0.21
MBD4-201ENST00000249910 NDST4Q9H3R1 872 aa16.35■□□□□ 0.21
MBD4-201ENST00000249910 SH2D4AQ9H788 454 aa16.35■□□□□ 0.21
MBD4-201ENST00000249910 FEM1BQ9UK73 627 aa16.35■□□□□ 0.21
MBD4-201ENST00000249910 CCPG1Q9ULG6 757 aa16.35■□□□□ 0.21
MBD4-201ENST00000249910 ZNF536O15090 1300 aa16.34■□□□□ 0.21
MBD4-201ENST00000249910 PHLPP2Q6ZVD8 1323 aa16.34■□□□□ 0.21
MBD4-201ENST00000249910 CYP3A4P08684 503 aa16.34■□□□□ 0.21
MBD4-201ENST00000249910 PPP1R2P41236 205 aa16.34■□□□□ 0.21
MBD4-201ENST00000249910 OTOP1Q7RTM1 612 aa16.34■□□□□ 0.21
MBD4-201ENST00000249910 CCDC65Q8IXS2 484 aa16.34■□□□□ 0.21
MBD4-201ENST00000249910 ERMNQ8TAM6 284 aa16.34■□□□□ 0.21
MBD4-201ENST00000249910 REEP2Q9BRK0 252 aa16.34■□□□□ 0.21
MBD4-201ENST00000249910 TTYH3Q9C0H2 523 aa16.34■□□□□ 0.21
MBD4-201ENST00000249910 COL20A1Q9P218 1284 aa16.34■□□□□ 0.21
MBD4-201ENST00000249910 CAPN11Q9UMQ6 739 aa16.34■□□□□ 0.21
MBD4-201ENST00000249910 MRPL11Q9Y3B7 192 aaKnown RBP16.34■□□□□ 0.21
MBD4-201ENST00000249910 ABCB11O95342 1321 aa16.34■□□□□ 0.21
MBD4-201ENST00000249910 PTGER2P43116 358 aa16.34■□□□□ 0.21
MBD4-201ENST00000249910 PSMD2Q13200 908 aa16.34■□□□□ 0.21
MBD4-201ENST00000249910 MTMR2Q13614 643 aa16.34■□□□□ 0.21
MBD4-201ENST00000249910 TRIM14Q14142 442 aa16.34■□□□□ 0.21
MBD4-201ENST00000249910 GIT2Q14161 759 aa16.34■□□□□ 0.21
MBD4-201ENST00000249910 CEP55Q53EZ4 464 aa16.34■□□□□ 0.21
MBD4-201ENST00000249910 LRCH2Q5VUJ6 765 aa16.34■□□□□ 0.21
MBD4-201ENST00000249910 ZKSCAN4Q969J2 545 aaPredicted RBP16.34■□□□□ 0.21
MBD4-201ENST00000249910 TANGO6Q9C0B7 1094 aa16.34■□□□□ 0.21
MBD4-201ENST00000249910 RAVER2Q9HCJ3 691 aaKnown RBP16.34■□□□□ 0.21
MBD4-201ENST00000249910 EMILIN3Q9NT22 766 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms