RNA–Protein interactions for RNA: ENST00000248958.4

SDF2L1-201, Transcript of stromal cell derived factor 2 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2L1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1-201ENST00000248958 LARGE1O95461 756 aa27.75■■■□□ 2.03
SDF2L1-201ENST00000248958 CTDNEP1O95476 244 aa27.75■■■□□ 2.03
SDF2L1-201ENST00000248958 TIMP1P01033 207 aa27.75■■■□□ 2.03
SDF2L1-201ENST00000248958 KCNA2P16389 499 aa27.75■■■□□ 2.03
SDF2L1-201ENST00000248958 RABEP1Q15276 862 aa27.75■■■□□ 2.03
SDF2L1-201ENST00000248958 FAM47CQ5HY64 1035 aa27.75■■■□□ 2.03
SDF2L1-201ENST00000248958 SESTD1Q86VW0 696 aa27.75■■■□□ 2.03
SDF2L1-201ENST00000248958 NECAB1Q8N987 351 aa27.75■■■□□ 2.03
SDF2L1-201ENST00000248958 KAT2BQ92831 832 aa27.75■■■□□ 2.03
SDF2L1-201ENST00000248958 ZSCAN31Q96LW9 406 aaPredicted RBP27.75■■■□□ 2.03
SDF2L1-201ENST00000248958 KCNH7Q9NS40 1196 aa27.75■■■□□ 2.03
SDF2L1-201ENST00000248958 ORC3Q9UBD5 711 aaPredicted RBP27.75■■■□□ 2.03
SDF2L1-201ENST00000248958 MEIS1O00470 390 aa27.74■■■□□ 2.03
SDF2L1-201ENST00000248958 B4GALT4O60513 344 aa27.74■■■□□ 2.03
SDF2L1-201ENST00000248958 ATP9AO75110 1047 aa27.74■■■□□ 2.03
SDF2L1-201ENST00000248958 PSEN2P49810 448 aa27.74■■■□□ 2.03
SDF2L1-201ENST00000248958 BLIDQ8IZY5 108 aa27.74■■■□□ 2.03
SDF2L1-201ENST00000248958 BADQ92934 168 aa27.74■■■□□ 2.03
SDF2L1-201ENST00000248958 GPR20Q99678 358 aa27.74■■■□□ 2.03
SDF2L1-201ENST00000248958 NFASCO94856 1347 aa27.73■■■□□ 2.03
SDF2L1-201ENST00000248958 HAS3O00219 553 aa27.73■■■□□ 2.03
SDF2L1-201ENST00000248958 MFSD10Q14728 455 aa27.73■■■□□ 2.03
SDF2L1-201ENST00000248958 BCAS3Q9H6U6 928 aa27.73■■■□□ 2.03
SDF2L1-201ENST00000248958 ADAMTS3O15072 1205 aa27.72■■■□□ 2.03
SDF2L1-201ENST00000248958 ZNF286BP0CG31 522 aa27.72■■■□□ 2.03
SDF2L1-201ENST00000248958 SETQ01105 290 aaPredicted RBP27.72■■■□□ 2.03
SDF2L1-201ENST00000248958 RASGRP4Q8TDF6 673 aa27.72■■■□□ 2.03
SDF2L1-201ENST00000248958 AIFM3Q96NN9 605 aa27.72■■■□□ 2.03
SDF2L1-201ENST00000248958 SDF4Q9BRK5 362 aa27.72■■■□□ 2.03
SDF2L1-201ENST00000248958 C16orf70Q9BSU1 422 aa27.72■■■□□ 2.03
SDF2L1-201ENST00000248958 TRPV6Q9H1D0 765 aa27.72■■■□□ 2.03
SDF2L1-201ENST00000248958 SH2B1Q9NRF2 756 aaPredicted RBP27.72■■■□□ 2.03
SDF2L1-201ENST00000248958 LGALS2P05162 132 aa27.71■■■□□ 2.03
SDF2L1-201ENST00000248958 ITGB8P26012 769 aa27.71■■■□□ 2.03
SDF2L1-201ENST00000248958 CIITAP33076 1130 aa27.71■■■□□ 2.03
SDF2L1-201ENST00000248958 USP11P51784 963 aa27.71■■■□□ 2.03
SDF2L1-201ENST00000248958 CHMP4BP1P59074 171 aa27.71■■■□□ 2.03
SDF2L1-201ENST00000248958 KIAA0753Q2KHM9 967 aa27.71■■■□□ 2.03
SDF2L1-201ENST00000248958 MFSD5Q6N075 450 aa27.71■■■□□ 2.03
SDF2L1-201ENST00000248958 TDHQ8IZJ6 230 aa27.71■■■□□ 2.03
SDF2L1-201ENST00000248958 C7orf31Q8N865 590 aa27.71■■■□□ 2.03
SDF2L1-201ENST00000248958 NSUN7Q8NE18 718 aaKnown RBP27.71■■■□□ 2.03
SDF2L1-201ENST00000248958 CYP2W1Q8TAV3 490 aa27.71■■■□□ 2.03
SDF2L1-201ENST00000248958 SEPT1Q8WYJ6 367 aa27.71■■■□□ 2.03
SDF2L1-201ENST00000248958 ALG1Q9BT22 464 aa27.71■■■□□ 2.03
SDF2L1-201ENST00000248958 PHF20Q9BVI0 1012 aa27.71■■■□□ 2.03
SDF2L1-201ENST00000248958 H3BRB1 525 aa27.7■■■□□ 2.02
SDF2L1-201ENST00000248958 M0R2N6 131 aa27.7■■■□□ 2.02
SDF2L1-201ENST00000248958 ST18O60284 1047 aa27.7■■■□□ 2.02
SDF2L1-201ENST00000248958 ARP10275 920 aa27.7■■■□□ 2.02
SDF2L1-201ENST00000248958 PLA2G4DQ86XP0 818 aa27.7■■■□□ 2.02
SDF2L1-201ENST00000248958 TMEM199Q8N511 208 aa27.7■■■□□ 2.02
SDF2L1-201ENST00000248958 HIPK3Q9H422 1215 aa27.7■■■□□ 2.02
SDF2L1-201ENST00000248958 TUT1Q9H6E5 874 aaKnown RBP27.7■■■□□ 2.02
SDF2L1-201ENST00000248958 AGO4Q9HCK5 861 aaKnown RBP27.7■■■□□ 2.02
SDF2L1-201ENST00000248958 JPH1Q9HDC5 661 aaPredicted RBP27.7■■■□□ 2.02
SDF2L1-201ENST00000248958 TRMT13Q9NUP7 481 aaKnown RBP27.7■■■□□ 2.02
SDF2L1-201ENST00000248958 ZNF215Q9UL58 517 aaPredicted RBP27.7■■■□□ 2.02
SDF2L1-201ENST00000248958 FAM86B1E9PN63 330 aa27.69■■■□□ 2.02
SDF2L1-201ENST00000248958 FAM86B2P0C5J1 330 aa27.69■■■□□ 2.02
SDF2L1-201ENST00000248958 FPGSQ05932 587 aa27.69■■■□□ 2.02
SDF2L1-201ENST00000248958 PKD2L1Q9P0L9 805 aa27.69■■■□□ 2.02
SDF2L1-201ENST00000248958 SLC9A2Q9UBY0 812 aa27.69■■■□□ 2.02
SDF2L1-201ENST00000248958 GTF2IRD1Q9UHL9 959 aa27.69■■■□□ 2.02
SDF2L1-201ENST00000248958 NOD1Q9Y239 953 aa27.69■■■□□ 2.02
SDF2L1-201ENST00000248958 IGLV3-22A0A075B6J6 115 aa27.68■■■□□ 2.02
SDF2L1-201ENST00000248958 FDPSP14324 419 aaKnown RBP27.68■■■□□ 2.02
SDF2L1-201ENST00000248958 SP4Q02446 784 aa27.68■■■□□ 2.02
SDF2L1-201ENST00000248958 KRT25Q7Z3Z0 450 aa27.68■■■□□ 2.02
SDF2L1-201ENST00000248958 LLPHQ9BRT6 129 aaKnown RBP27.68■■■□□ 2.02
SDF2L1-201ENST00000248958 PPP1R12CQ9BZL4 782 aa27.68■■■□□ 2.02
SDF2L1-201ENST00000248958 HDAC6Q9UBN7 1215 aa27.68■■■□□ 2.02
SDF2L1-201ENST00000248958 TCF7P36402 384 aaPredicted RBP27.67■■■□□ 2.02
SDF2L1-201ENST00000248958 PPIGQ13427 754 aaKnown RBP eCLIP27.67■■■□□ 2.02
SDF2L1-201ENST00000248958 NPY5RQ15761 445 aa27.67■■■□□ 2.02
SDF2L1-201ENST00000248958 PTGISQ16647 500 aa27.67■■■□□ 2.02
SDF2L1-201ENST00000248958 TBC1D32Q96NH3 1257 aa27.67■■■□□ 2.02
SDF2L1-201ENST00000248958 NOC4LQ9BVI4 516 aaKnown RBP27.67■■■□□ 2.02
SDF2L1-201ENST00000248958 KCNJ14Q9UNX9 436 aa27.67■■■□□ 2.02
SDF2L1-201ENST00000248958 NONOQ15233 471 aaKnown RBP eCLIP27.66■■■□□ 2.02
SDF2L1-201ENST00000248958 UTP14CQ5TAP6 766 aaKnown RBP27.66■■■□□ 2.02
SDF2L1-201ENST00000248958 GDF6Q6KF10 455 aaPredicted RBP27.66■■■□□ 2.02
SDF2L1-201ENST00000248958 CCDC155Q8N6L0 562 aa27.66■■■□□ 2.02
SDF2L1-201ENST00000248958 TBCKQ8TEA7 893 aa27.66■■■□□ 2.02
SDF2L1-201ENST00000248958 BRMS1Q9HCU9 246 aa27.66■■■□□ 2.02
SDF2L1-201ENST00000248958 GSTTP1A0A1W2PQM5 241 aa27.65■■■□□ 2.02
SDF2L1-201ENST00000248958 FXR1P51114 621 aaKnown RBP eCLIP27.65■■■□□ 2.02
SDF2L1-201ENST00000248958 ST3GAL1Q11201 340 aa27.65■■■□□ 2.02
SDF2L1-201ENST00000248958 BFSP2Q13515 415 aa27.65■■■□□ 2.02
SDF2L1-201ENST00000248958 CCDC83Q8IWF9 413 aa27.65■■■□□ 2.02
SDF2L1-201ENST00000248958 SMARCAD1Q9H4L7 1026 aa27.65■■■□□ 2.02
SDF2L1-201ENST00000248958 TBC1D22BQ9NU19 505 aa27.65■■■□□ 2.02
SDF2L1-201ENST00000248958 CCDC194A0A1B0GVG4 234 aa27.64■■■□□ 2.02
SDF2L1-201ENST00000248958 IPO5O00410 1097 aaKnown RBP27.64■■■□□ 2.02
SDF2L1-201ENST00000248958 PITPNM1O00562 1244 aa27.64■■■□□ 2.02
SDF2L1-201ENST00000248958 CYP2C9P11712 490 aa27.64■■■□□ 2.02
SDF2L1-201ENST00000248958 CYP2C18P33260 490 aa27.64■■■□□ 2.02
SDF2L1-201ENST00000248958 ITGB3BPQ13352 177 aaPredicted RBP27.64■■■□□ 2.02
SDF2L1-201ENST00000248958 TRIM29Q14134 588 aa27.64■■■□□ 2.02
SDF2L1-201ENST00000248958 PRR16Q569H4 304 aa27.64■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms