RNA–Protein interactions for RNA: ENST00000247225.6

SGPP1-201, Transcript of sphingosine-1-phosphate phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGPP1, Length 3,312 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGPP1-201ENST00000247225 NBPF9Q3BBW0 867 aa18.53■□□□□ 0.56
SGPP1-201ENST00000247225 CENPPQ6IPU0 288 aa18.53■□□□□ 0.56
SGPP1-201ENST00000247225 POTEBQ6S5H4 581 aa18.53■□□□□ 0.56
SGPP1-201ENST00000247225 FBXO33Q7Z6M2 555 aa18.53■□□□□ 0.56
SGPP1-201ENST00000247225 GPBP1Q86WP2 473 aa18.53■□□□□ 0.56
SGPP1-201ENST00000247225 MDM1Q8TC05 714 aa18.53■□□□□ 0.56
SGPP1-201ENST00000247225 COL4A3BPQ9Y5P4 624 aa18.53■□□□□ 0.56
SGPP1-201ENST00000247225 SPEF2Q9C093 1822 aa18.53■□□□□ 0.56
SGPP1-201ENST00000247225 ITGA4P13612 1032 aa18.53■□□□□ 0.56
SGPP1-201ENST00000247225 PABPC4Q13310 644 aaKnown RBP eCLIP18.53■□□□□ 0.56
SGPP1-201ENST00000247225 UNC13DQ70J99 1090 aa18.53■□□□□ 0.56
SGPP1-201ENST00000247225 LUC7LQ9NQ29 371 aaKnown RBP18.53■□□□□ 0.56
SGPP1-201ENST00000247225 FAM196BA6NMK8 535 aa18.52■□□□□ 0.56
SGPP1-201ENST00000247225 KRIT1O00522 736 aa18.52■□□□□ 0.56
SGPP1-201ENST00000247225 DAPK3O43293 454 aa18.52■□□□□ 0.56
SGPP1-201ENST00000247225 KRT71Q3SY84 523 aa18.52■□□□□ 0.56
SGPP1-201ENST00000247225 PCDHA12Q9UN75 941 aa18.52■□□□□ 0.56
SGPP1-201ENST00000247225 NID2Q14112 1375 aa18.52■□□□□ 0.56
SGPP1-201ENST00000247225 GNPATO15228 680 aa18.52■□□□□ 0.56
SGPP1-201ENST00000247225 GUCY2CP25092 1073 aa18.52■□□□□ 0.56
SGPP1-201ENST00000247225 ADCY7P51828 1080 aa18.52■□□□□ 0.56
SGPP1-201ENST00000247225 CDR1P51861 262 aa18.52■□□□□ 0.56
SGPP1-201ENST00000247225 COASYQ13057 564 aa18.52■□□□□ 0.56
SGPP1-201ENST00000247225 U2AF1L4Q8WU68 220 aaKnown RBP18.52■□□□□ 0.56
SGPP1-201ENST00000247225 BAP1Q92560 729 aa18.52■□□□□ 0.56
SGPP1-201ENST00000247225 SELENOSQ9BQE4 189 aa18.52■□□□□ 0.56
SGPP1-201ENST00000247225 GGT7Q9UJ14 662 aa18.52■□□□□ 0.56
SGPP1-201ENST00000247225 MYH6P13533 1939 aa18.52■□□□□ 0.55
SGPP1-201ENST00000247225 GCOM1H8Y6P7 765 aaPredicted RBP18.52■□□□□ 0.55
SGPP1-201ENST00000247225 MYZAPP0CAP1 466 aa18.52■□□□□ 0.55
SGPP1-201ENST00000247225 FLT3P36888 993 aa18.52■□□□□ 0.55
SGPP1-201ENST00000247225 FKBP3Q00688 224 aaKnown RBP18.52■□□□□ 0.55
SGPP1-201ENST00000247225 CPLX4Q7Z7G2 160 aa18.52■□□□□ 0.55
SGPP1-201ENST00000247225 KIRREL3Q8IZU9 778 aa18.52■□□□□ 0.55
SGPP1-201ENST00000247225 ZNF473Q8WTR7 871 aaKnown RBP18.52■□□□□ 0.55
SGPP1-201ENST00000247225 RAB34Q9BZG1 259 aa18.52■□□□□ 0.55
SGPP1-201ENST00000247225 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.52■□□□□ 0.55
SGPP1-201ENST00000247225 ATP8A1Q9Y2Q0 1164 aa18.52■□□□□ 0.55
SGPP1-201ENST00000247225 TNS2Q63HR2 1409 aa18.52■□□□□ 0.55
SGPP1-201ENST00000247225 MYH7P12883 1935 aa18.52■□□□□ 0.55
SGPP1-201ENST00000247225 KIF1AQ12756 1690 aa18.51■□□□□ 0.55
SGPP1-201ENST00000247225 BUB1BO60566 1050 aaPredicted RBP18.51■□□□□ 0.55
SGPP1-201ENST00000247225 ZNF211Q13398 564 aaPredicted RBP18.51■□□□□ 0.55
SGPP1-201ENST00000247225 ALS2CLQ60I27 953 aa18.51■□□□□ 0.55
SGPP1-201ENST00000247225 MCTP2Q6DN12 878 aa18.51■□□□□ 0.55
SGPP1-201ENST00000247225 CHADLQ6NUI6 762 aa18.51■□□□□ 0.55
SGPP1-201ENST00000247225 B4GALNT4Q76KP1 1039 aa18.51■□□□□ 0.55
SGPP1-201ENST00000247225 DAAM2Q86T65 1068 aa18.51■□□□□ 0.55
SGPP1-201ENST00000247225 DDX25Q9UHL0 483 aaKnown RBP18.51■□□□□ 0.55
SGPP1-201ENST00000247225 PHF20L1A8MW92 1017 aa18.51■□□□□ 0.55
SGPP1-201ENST00000247225 C6orf229H3BNL8 230 aa18.51■□□□□ 0.55
SGPP1-201ENST00000247225 DPP8Q6V1X1 898 aaPredicted RBP18.51■□□□□ 0.55
SGPP1-201ENST00000247225 CCDC121Q6ZUS5 278 aa18.51■□□□□ 0.55
SGPP1-201ENST00000247225 NLRP14Q86W24 1093 aa18.51■□□□□ 0.55
SGPP1-201ENST00000247225 CABS1Q96KC9 395 aa18.51■□□□□ 0.55
SGPP1-201ENST00000247225 NR2F2P24468 414 aa18.51■□□□□ 0.55
SGPP1-201ENST00000247225 TNNC1P63316 161 aa18.51■□□□□ 0.55
SGPP1-201ENST00000247225 TBC1D10BQ4KMP7 808 aaPredicted RBP18.51■□□□□ 0.55
SGPP1-201ENST00000247225 AK8Q96MA6 479 aa18.51■□□□□ 0.55
SGPP1-201ENST00000247225 USP8P40818 1118 aa18.5■□□□□ 0.55
SGPP1-201ENST00000247225 SLCO1A2P46721 670 aa18.5■□□□□ 0.55
SGPP1-201ENST00000247225 PTK2Q05397 1052 aa18.5■□□□□ 0.55
SGPP1-201ENST00000247225 PEX26Q7Z412 305 aa18.5■□□□□ 0.55
SGPP1-201ENST00000247225 RAD54LQ92698 747 aa18.5■□□□□ 0.55
SGPP1-201ENST00000247225 RTCBQ9Y3I0 505 aaKnown RBP18.5■□□□□ 0.55
SGPP1-201ENST00000247225 POTEFA5A3E0 1075 aa18.5■□□□□ 0.55
SGPP1-201ENST00000247225 DCDC2CA8MYV0 355 aa18.5■□□□□ 0.55
SGPP1-201ENST00000247225 PPP1R37O75864 691 aa18.5■□□□□ 0.55
SGPP1-201ENST00000247225 POTEIP0CG38 1075 aa18.5■□□□□ 0.55
SGPP1-201ENST00000247225 KCNH2Q12809 1159 aa18.5■□□□□ 0.55
SGPP1-201ENST00000247225 POTEGQ6S5H5 508 aa18.5■□□□□ 0.55
SGPP1-201ENST00000247225 POTEEQ6S8J3 1075 aa18.5■□□□□ 0.55
SGPP1-201ENST00000247225 MAEAQ7L5Y9 396 aa18.5■□□□□ 0.55
SGPP1-201ENST00000247225 PURBQ96QR8 312 aaKnown RBP18.5■□□□□ 0.55
SGPP1-201ENST00000247225 ZMYND12Q9H0C1 365 aa18.5■□□□□ 0.55
SGPP1-201ENST00000247225 BCL9O00512 1426 aa18.5■□□□□ 0.55
SGPP1-201ENST00000247225 PALM3A6NDB9 673 aaPredicted RBP18.49■□□□□ 0.55
SGPP1-201ENST00000247225 IFNAR2P48551 515 aa18.49■□□□□ 0.55
SGPP1-201ENST00000247225 GBP6Q6ZN66 633 aa18.49■□□□□ 0.55
SGPP1-201ENST00000247225 TRIM51Q9BSJ1 452 aa18.49■□□□□ 0.55
SGPP1-201ENST00000247225 FBXL5Q9UKA1 691 aa18.49■□□□□ 0.55
SGPP1-201ENST00000247225 SERPING1P05155 500 aa18.49■□□□□ 0.55
SGPP1-201ENST00000247225 PCP11498 1178 aaKnown RBP18.49■□□□□ 0.55
SGPP1-201ENST00000247225 ERVK-9P63128 1117 aa18.49■□□□□ 0.55
SGPP1-201ENST00000247225 SH3GLB2Q9NR46 395 aa18.49■□□□□ 0.55
SGPP1-201ENST00000247225 PKD1L3Q7Z443 1732 aa18.49■□□□□ 0.55
SGPP1-201ENST00000247225 TTI1O43156 1089 aa18.49■□□□□ 0.55
SGPP1-201ENST00000247225 GFPT2O94808 682 aa18.49■□□□□ 0.55
SGPP1-201ENST00000247225 KRT13P13646 458 aa18.49■□□□□ 0.55
SGPP1-201ENST00000247225 USH1GQ495M9 461 aa18.49■□□□□ 0.55
SGPP1-201ENST00000247225 KCNV1Q6PIU1 500 aa18.49■□□□□ 0.55
SGPP1-201ENST00000247225 CCDC25Q86WR0 208 aa18.49■□□□□ 0.55
SGPP1-201ENST00000247225 TBC1D31Q96DN5 1066 aa18.49■□□□□ 0.55
SGPP1-201ENST00000247225 ATP6V0A2Q9Y487 856 aa18.49■□□□□ 0.55
SGPP1-201ENST00000247225 GRID2IPA4D2P6 1211 aa18.48■□□□□ 0.55
SGPP1-201ENST00000247225 MEFVO15553 781 aaPredicted RBP18.48■□□□□ 0.55
SGPP1-201ENST00000247225 SART1O43290 800 aaKnown RBP18.48■□□□□ 0.55
SGPP1-201ENST00000247225 CHMP2AO43633 222 aa18.48■□□□□ 0.55
SGPP1-201ENST00000247225 RPSAP08865 295 aaKnown RBP18.48■□□□□ 0.55
SGPP1-201ENST00000247225 MAP2K2P36507 400 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms