RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 NEDD9Q14511 834 aa12.87□□□□□ -0.35
SF3B6-201ENST00000233468 SNX17Q15036 470 aa12.87□□□□□ -0.35
SF3B6-201ENST00000233468 FSCN1Q16658 493 aaKnown RBP12.87□□□□□ -0.35
SF3B6-201ENST00000233468 FAM109BQ6ICB4 259 aaPredicted RBP12.87□□□□□ -0.35
SF3B6-201ENST00000233468 FAM184AQ8NB25 1140 aa12.87□□□□□ -0.35
SF3B6-201ENST00000233468 GIMAP8Q8ND71 665 aaPredicted RBP12.87□□□□□ -0.35
SF3B6-201ENST00000233468 GPRASP2Q96D09 838 aa12.87□□□□□ -0.35
SF3B6-201ENST00000233468 ALG1Q9BT22 464 aa12.87□□□□□ -0.35
SF3B6-201ENST00000233468 TMEM121BQ9BXQ6 578 aaPredicted RBP12.87□□□□□ -0.35
SF3B6-201ENST00000233468 SEZ6LQ9BYH1 1024 aa12.87□□□□□ -0.35
SF3B6-201ENST00000233468 ANO3Q9BYT9 981 aa12.87□□□□□ -0.35
SF3B6-201ENST00000233468 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.86□□□□□ -0.35
SF3B6-201ENST00000233468 LARGE1O95461 756 aa12.86□□□□□ -0.35
SF3B6-201ENST00000233468 ICAM3P32942 547 aa12.86□□□□□ -0.35
SF3B6-201ENST00000233468 SREBF1P36956 1147 aa12.86□□□□□ -0.35
SF3B6-201ENST00000233468 CLK2P49760 499 aaKnown RBP12.86□□□□□ -0.35
SF3B6-201ENST00000233468 EPHB4P54760 987 aa12.86□□□□□ -0.35
SF3B6-201ENST00000233468 TLE2Q04725 743 aa12.86□□□□□ -0.35
SF3B6-201ENST00000233468 JAKMIP3Q5VZ66 844 aa12.86□□□□□ -0.35
SF3B6-201ENST00000233468 CCDC83Q8IWF9 413 aa12.86□□□□□ -0.35
SF3B6-201ENST00000233468 BLIDQ8IZY5 108 aa12.86□□□□□ -0.35
SF3B6-201ENST00000233468 DAGLBQ8NCG7 672 aa12.86□□□□□ -0.35
SF3B6-201ENST00000233468 NSUN7Q8NE18 718 aaKnown RBP12.86□□□□□ -0.35
SF3B6-201ENST00000233468 KLHDC9Q8NEP7 349 aa12.86□□□□□ -0.35
SF3B6-201ENST00000233468 OR6J1Q8NGC5 347 aa12.86□□□□□ -0.35
SF3B6-201ENST00000233468 GLT1D1Q96MS3 346 aa12.86□□□□□ -0.35
SF3B6-201ENST00000233468 INPP4AQ96PE3 977 aaPredicted RBP12.86□□□□□ -0.35
SF3B6-201ENST00000233468 COL25A1Q9BXS0 654 aaPredicted RBP12.86□□□□□ -0.35
SF3B6-201ENST00000233468 POLR3EQ9NVU0 708 aa12.86□□□□□ -0.35
SF3B6-201ENST00000233468 DDX49Q9Y6V7 483 aaKnown RBP12.86□□□□□ -0.35
SF3B6-201ENST00000233468 CTDNEP1O95476 244 aa12.85□□□□□ -0.35
SF3B6-201ENST00000233468 SAFBQ15424 915 aaKnown RBP eCLIP12.85□□□□□ -0.35
SF3B6-201ENST00000233468 CCDC62Q6P9F0 684 aa12.85□□□□□ -0.35
SF3B6-201ENST00000233468 KRT25Q7Z3Z0 450 aa12.85□□□□□ -0.35
SF3B6-201ENST00000233468 DHX37Q8IY37 1157 aaKnown RBP12.85□□□□□ -0.35
SF3B6-201ENST00000233468 IL31RAQ8NI17 732 aa12.85□□□□□ -0.35
SF3B6-201ENST00000233468 EMID1Q96A84 441 aaPredicted RBP12.85□□□□□ -0.35
SF3B6-201ENST00000233468 VTI1AQ96AJ9 217 aa12.85□□□□□ -0.35
SF3B6-201ENST00000233468 SENP7Q9BQF6 1050 aa12.85□□□□□ -0.35
SF3B6-201ENST00000233468 MLXIPQ9HAP2 919 aa12.85□□□□□ -0.35
SF3B6-201ENST00000233468 JADE2Q9NQC1 790 aa12.85□□□□□ -0.35
SF3B6-201ENST00000233468 RTEL1Q9NZ71 1219 aa12.85□□□□□ -0.35
SF3B6-201ENST00000233468 DDX41Q9UJV9 622 aaKnown RBP12.85□□□□□ -0.35
SF3B6-201ENST00000233468 PHF24Q9UPV7 400 aa12.85□□□□□ -0.35
SF3B6-201ENST00000233468 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.85□□□□□ -0.35
SF3B6-201ENST00000233468 CCDC194A0A1B0GVG4 234 aa12.84□□□□□ -0.35
SF3B6-201ENST00000233468 SPATA31C2B4DYI2 1134 aa12.84□□□□□ -0.35
SF3B6-201ENST00000233468 CYP3A4P08684 503 aa12.84□□□□□ -0.35
SF3B6-201ENST00000233468 USP11P51784 963 aa12.84□□□□□ -0.35
SF3B6-201ENST00000233468 ACLYP53396 1101 aa12.84□□□□□ -0.35
SF3B6-201ENST00000233468 MRPS9P82933 396 aaKnown RBP12.84□□□□□ -0.35
SF3B6-201ENST00000233468 ARHGAP4P98171 946 aa12.84□□□□□ -0.35
SF3B6-201ENST00000233468 SETQ01105 290 aaPredicted RBP12.84□□□□□ -0.35
SF3B6-201ENST00000233468 MTMR1Q13613 665 aa12.84□□□□□ -0.35
SF3B6-201ENST00000233468 KCNA10Q16322 511 aa12.84□□□□□ -0.35
SF3B6-201ENST00000233468 LY6KQ17RY6 165 aa12.84□□□□□ -0.35
SF3B6-201ENST00000233468 CEP55Q53EZ4 464 aa12.84□□□□□ -0.35
SF3B6-201ENST00000233468 ZNF697Q5TEC3 545 aa12.84□□□□□ -0.35
SF3B6-201ENST00000233468 NIPA1Q7RTP0 329 aa12.84□□□□□ -0.35
SF3B6-201ENST00000233468 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.84□□□□□ -0.35
SF3B6-201ENST00000233468 TMX3Q96JJ7 454 aa12.84□□□□□ -0.35
SF3B6-201ENST00000233468 CDX2Q99626 313 aaPredicted RBP12.84□□□□□ -0.35
SF3B6-201ENST00000233468 NAP1L4Q99733 375 aaKnown RBP12.84□□□□□ -0.35
SF3B6-201ENST00000233468 MXRA8Q9BRK3 442 aa12.84□□□□□ -0.35
SF3B6-201ENST00000233468 PHF20Q9BVI0 1012 aa12.84□□□□□ -0.35
SF3B6-201ENST00000233468 TTYH1Q9H313 450 aaPredicted RBP12.84□□□□□ -0.35
SF3B6-201ENST00000233468 SEMA6BQ9H3T3 888 aa12.84□□□□□ -0.35
SF3B6-201ENST00000233468 STARD7Q9NQZ5 370 aa12.84□□□□□ -0.35
SF3B6-201ENST00000233468 MYO9BQ13459 2157 aa12.84□□□□□ -0.35
SF3B6-201ENST00000233468 ELP1O95163 1332 aa12.84□□□□□ -0.35
SF3B6-201ENST00000233468 A0A1W2PQ45 241 aaPredicted RBP12.83□□□□□ -0.36
SF3B6-201ENST00000233468 A0A1W2PQY0 241 aa12.83□□□□□ -0.36
SF3B6-201ENST00000233468 A6NJR5 290 aa12.83□□□□□ -0.36
SF3B6-201ENST00000233468 NOP56O00567 594 aaKnown RBP12.83□□□□□ -0.36
SF3B6-201ENST00000233468 ADCY6O43306 1168 aa12.83□□□□□ -0.36
SF3B6-201ENST00000233468 RGS20O76081 388 aa12.83□□□□□ -0.36
SF3B6-201ENST00000233468 ASGR1P07306 291 aa12.83□□□□□ -0.36
SF3B6-201ENST00000233468 KRT2P35908 639 aa12.83□□□□□ -0.36
SF3B6-201ENST00000233468 NONOQ15233 471 aaKnown RBP eCLIP12.83□□□□□ -0.36
SF3B6-201ENST00000233468 DGKDQ16760 1214 aa12.83□□□□□ -0.36
SF3B6-201ENST00000233468 CELF3Q5SZQ8 465 aaKnown RBP12.83□□□□□ -0.36
SF3B6-201ENST00000233468 C1orf53Q5VUE5 145 aa12.83□□□□□ -0.36
SF3B6-201ENST00000233468 PPTC7Q8NI37 304 aa12.83□□□□□ -0.36
SF3B6-201ENST00000233468 C8orf76Q96K31 380 aa12.83□□□□□ -0.36
SF3B6-201ENST00000233468 SPATA33Q96N06 139 aa12.83□□□□□ -0.36
SF3B6-201ENST00000233468 TMEM260Q9NX78 707 aa12.83□□□□□ -0.36
SF3B6-201ENST00000233468 UBIAD1Q9Y5Z9 338 aa12.83□□□□□ -0.36
SF3B6-201ENST00000233468 CHD9Q3L8U1 2897 aa12.83□□□□□ -0.36
SF3B6-201ENST00000233468 REV3LO60673 3130 aa12.82□□□□□ -0.36
SF3B6-201ENST00000233468 MYADML2A6NDP7 307 aa12.82□□□□□ -0.36
SF3B6-201ENST00000233468 JAK2O60674 1132 aa12.82□□□□□ -0.36
SF3B6-201ENST00000233468 PQBP1O60828 265 aaKnown RBP12.82□□□□□ -0.36
SF3B6-201ENST00000233468 PPFIA4O75335 1185 aa12.82□□□□□ -0.36
SF3B6-201ENST00000233468 ARIH2O95376 493 aa12.82□□□□□ -0.36
SF3B6-201ENST00000233468 GGPS1O95749 300 aa12.82□□□□□ -0.36
SF3B6-201ENST00000233468 CLTBP09497 229 aa12.82□□□□□ -0.36
SF3B6-201ENST00000233468 FDPSP14324 419 aaKnown RBP12.82□□□□□ -0.36
SF3B6-201ENST00000233468 UBA1P22314 1058 aaKnown RBP12.82□□□□□ -0.36
SF3B6-201ENST00000233468 ARHGAP1Q07960 439 aa12.82□□□□□ -0.36
SF3B6-201ENST00000233468 CCSAPQ6IQ19 270 aaPredicted RBP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms