RNA–Protein interactions for RNA: ENST00000233146.6

MSH2-201, Transcript of mutS homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH2, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-201ENST00000233146 GATA6Q92908 595 aa14.21□□□□□ -0.14
MSH2-201ENST00000233146 COMMD3-BMI1R4GMX3 469 aa14.21□□□□□ -0.14
MSH2-201ENST00000233146 DDX60Q8IY21 1712 aaKnown RBP14.21□□□□□ -0.14
MSH2-201ENST00000233146 HNRNPRO43390 633 aaKnown RBP14.2□□□□□ -0.14
MSH2-201ENST00000233146 CEP104O60308 925 aa14.2□□□□□ -0.14
MSH2-201ENST00000233146 PAK1Q13153 545 aa14.2□□□□□ -0.14
MSH2-201ENST00000233146 NEUROG2Q9H2A3 272 aa14.2□□□□□ -0.14
MSH2-201ENST00000233146 HELLSQ9NRZ9 838 aa14.2□□□□□ -0.14
MSH2-201ENST00000233146 MAGEA13PA6NCF6 341 aa14.2□□□□□ -0.14
MSH2-201ENST00000233146 F8VZ95 297 aa14.2□□□□□ -0.14
MSH2-201ENST00000233146 KCNA3P22001 575 aa14.2□□□□□ -0.14
MSH2-201ENST00000233146 YY1P25490 414 aa14.2□□□□□ -0.14
MSH2-201ENST00000233146 PDE6CP51160 858 aa14.2□□□□□ -0.14
MSH2-201ENST00000233146 MUM1Q2TAK8 710 aa14.2□□□□□ -0.14
MSH2-201ENST00000233146 STKLD1Q8NE28 680 aa14.2□□□□□ -0.14
MSH2-201ENST00000233146 CCDC42Q96M95 316 aa14.2□□□□□ -0.14
MSH2-201ENST00000233146 RXFP1Q9HBX9 757 aa14.2□□□□□ -0.14
MSH2-201ENST00000233146 LNPEPQ9UIQ6 1025 aa14.2□□□□□ -0.14
MSH2-201ENST00000233146 CPS1P31327 1500 aa14.2□□□□□ -0.14
MSH2-201ENST00000233146 CETN3O15182 167 aa14.2□□□□□ -0.14
MSH2-201ENST00000233146 TJP3O95049 919 aa14.2□□□□□ -0.14
MSH2-201ENST00000233146 SPATA31D3P0C874 917 aa14.2□□□□□ -0.14
MSH2-201ENST00000233146 FUT4P22083 530 aa14.2□□□□□ -0.14
MSH2-201ENST00000233146 FLT3P36888 993 aa14.2□□□□□ -0.14
MSH2-201ENST00000233146 CTDSPL2Q05D32 466 aa14.2□□□□□ -0.14
MSH2-201ENST00000233146 CCDC92Q53HC0 331 aaPredicted RBP14.2□□□□□ -0.14
MSH2-201ENST00000233146 RASIP1Q5U651 963 aa14.2□□□□□ -0.14
MSH2-201ENST00000233146 SPATA31D4Q6ZUB0 917 aa14.2□□□□□ -0.14
MSH2-201ENST00000233146 NCCRP1Q6ZVX7 275 aaPredicted RBP14.2□□□□□ -0.14
MSH2-201ENST00000233146 FITM2Q8N6M3 262 aa14.2□□□□□ -0.14
MSH2-201ENST00000233146 DDX27Q96GQ7 796 aaKnown RBP14.2□□□□□ -0.14
MSH2-201ENST00000233146 NUDCD1Q96RS6 583 aa14.2□□□□□ -0.14
MSH2-201ENST00000233146 PRMT1Q99873 361 aaKnown RBP14.2□□□□□ -0.14
MSH2-201ENST00000233146 OXCT2Q9BYC2 517 aaPredicted RBP14.2□□□□□ -0.14
MSH2-201ENST00000233146 PPP1R12CQ9BZL4 782 aa14.2□□□□□ -0.14
MSH2-201ENST00000233146 CSRNP2Q9H175 543 aa14.2□□□□□ -0.14
MSH2-201ENST00000233146 C9orf78Q9NZ63 289 aaPredicted RBP14.2□□□□□ -0.14
MSH2-201ENST00000233146 ABCF2Q9UG63 623 aa14.2□□□□□ -0.14
MSH2-201ENST00000233146 SALL4Q9UJQ4 1053 aa14.2□□□□□ -0.14
MSH2-201ENST00000233146 PDS5AQ29RF7 1337 aaKnown RBP14.2□□□□□ -0.14
MSH2-201ENST00000233146 RIMS1Q86UR5 1692 aaKnown RBP14.19□□□□□ -0.14
MSH2-201ENST00000233146 LCA5LO95447 670 aa14.19□□□□□ -0.14
MSH2-201ENST00000233146 GJB6O95452 261 aa14.19□□□□□ -0.14
MSH2-201ENST00000233146 CYP1A1P04798 512 aaPredicted RBP14.19□□□□□ -0.14
MSH2-201ENST00000233146 SULT2A1Q06520 285 aa14.19□□□□□ -0.14
MSH2-201ENST00000233146 NOSTRINQ8IVI9 506 aa14.19□□□□□ -0.14
MSH2-201ENST00000233146 FERMT2Q96AC1 680 aa14.19□□□□□ -0.14
MSH2-201ENST00000233146 HIC2Q96JB3 615 aa14.19□□□□□ -0.14
MSH2-201ENST00000233146 FAM81BQ96LP2 452 aa14.19□□□□□ -0.14
MSH2-201ENST00000233146 VPS54Q9P1Q0 977 aa14.19□□□□□ -0.14
MSH2-201ENST00000233146 DBNLQ9UJU6 430 aaKnown RBP14.19□□□□□ -0.14
MSH2-201ENST00000233146 TMEM59LQ9UK28 342 aa14.19□□□□□ -0.14
MSH2-201ENST00000233146 MROH7Q68CQ1 1323 aa14.19□□□□□ -0.14
MSH2-201ENST00000233146 O00370 1275 aa14.19□□□□□ -0.14
MSH2-201ENST00000233146 NVLO15381 856 aaKnown RBP14.19□□□□□ -0.14
MSH2-201ENST00000233146 PRPF3O43395 683 aaKnown RBP14.19□□□□□ -0.14
MSH2-201ENST00000233146 SUN1O94901 812 aa14.19□□□□□ -0.14
MSH2-201ENST00000233146 TNNC1P63316 161 aa14.19□□□□□ -0.14
MSH2-201ENST00000233146 RCN2Q14257 317 aa14.19□□□□□ -0.14
MSH2-201ENST00000233146 RRAGBQ5VZM2 374 aa14.19□□□□□ -0.14
MSH2-201ENST00000233146 SEPT14Q6ZU15 432 aa14.19□□□□□ -0.14
MSH2-201ENST00000233146 SLF2Q8IX21 1173 aa14.19□□□□□ -0.14
MSH2-201ENST00000233146 SH3TC2Q8TF17 1288 aa14.19□□□□□ -0.14
MSH2-201ENST00000233146 NMRK1Q9NWW6 199 aa14.19□□□□□ -0.14
MSH2-201ENST00000233146 NUB1Q9Y5A7 615 aa14.19□□□□□ -0.14
MSH2-201ENST00000233146 CD2APQ9Y5K6 639 aa14.19□□□□□ -0.14
MSH2-201ENST00000233146 MAP3K19Q56UN5 1328 aa14.19□□□□□ -0.14
MSH2-201ENST00000233146 PJA2O43164 708 aa14.18□□□□□ -0.14
MSH2-201ENST00000233146 NELFBQ8WX92 580 aa14.18□□□□□ -0.14
MSH2-201ENST00000233146 HAUS7Q99871 368 aa14.18□□□□□ -0.14
MSH2-201ENST00000233146 DDX23Q9BUQ8 820 aaKnown RBP14.18□□□□□ -0.14
MSH2-201ENST00000233146 STRN4Q9NRL3 753 aa14.18□□□□□ -0.14
MSH2-201ENST00000233146 FAM114A2Q9NRY5 505 aa14.18□□□□□ -0.14
MSH2-201ENST00000233146 INTS9Q9NV88 658 aaKnown RBP14.18□□□□□ -0.14
MSH2-201ENST00000233146 SH3GLB1Q9Y371 365 aa14.18□□□□□ -0.14
MSH2-201ENST00000233146 PCDH11XQ9BZA7 1347 aa14.18□□□□□ -0.14
MSH2-201ENST00000233146 ECM29Q5VYK3 1845 aa14.18□□□□□ -0.14
MSH2-201ENST00000233146 PLEKP08567 350 aaPredicted RBP14.18□□□□□ -0.14
MSH2-201ENST00000233146 SRGNP10124 158 aa14.18□□□□□ -0.14
MSH2-201ENST00000233146 IDO1P14902 403 aa14.18□□□□□ -0.14
MSH2-201ENST00000233146 ZFXP17010 805 aaPredicted RBP14.18□□□□□ -0.14
MSH2-201ENST00000233146 NAT1P18440 290 aa14.18□□□□□ -0.14
MSH2-201ENST00000233146 SH3BGRP55822 239 aaPredicted RBP14.18□□□□□ -0.14
MSH2-201ENST00000233146 EIF3BP55884 814 aaKnown RBP14.18□□□□□ -0.14
MSH2-201ENST00000233146 RASSF7Q02833 373 aa14.18□□□□□ -0.14
MSH2-201ENST00000233146 GGT6Q6P531 493 aa14.18□□□□□ -0.14
MSH2-201ENST00000233146 TMC3Q7Z5M5 1100 aa14.18□□□□□ -0.14
MSH2-201ENST00000233146 KBTBD3Q8NAB2 608 aa14.18□□□□□ -0.14
MSH2-201ENST00000233146 SUPT20HQ8NEM7 779 aa14.18□□□□□ -0.14
MSH2-201ENST00000233146 TBC1D16Q8TBP0 767 aa14.18□□□□□ -0.14
MSH2-201ENST00000233146 KAZALD1Q96I82 304 aa14.18□□□□□ -0.14
MSH2-201ENST00000233146 INPP4AQ96PE3 977 aaPredicted RBP14.18□□□□□ -0.14
MSH2-201ENST00000233146 ARPC5LQ9BPX5 153 aa14.18□□□□□ -0.14
MSH2-201ENST00000233146 BABAM1Q9NWV8 329 aa14.18□□□□□ -0.14
MSH2-201ENST00000233146 SPATA31D1Q6ZQQ2 1576 aa14.18□□□□□ -0.14
MSH2-201ENST00000233146 H7C1D1 291 aa14.18□□□□□ -0.14
MSH2-201ENST00000233146 ATP9AO75110 1047 aa14.18□□□□□ -0.14
MSH2-201ENST00000233146 UNC5CO95185 931 aa14.18□□□□□ -0.14
MSH2-201ENST00000233146 ASLP04424 464 aa14.18□□□□□ -0.14
MSH2-201ENST00000233146 DDX42Q86XP3 938 aaKnown RBP eCLIP14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms