RNA–Protein interactions for RNA: ENST00000229829.6

HLA-DOA-201, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DOA, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-201ENST00000229829 SIK3Q9Y2K2 1263 aa10.38□□□□□ -0.75
HLA-DOA-201ENST00000229829 PCDHA13Q9Y5I0 950 aa10.38□□□□□ -0.75
HLA-DOA-201ENST00000229829 SLC37A4O43826 429 aa10.37□□□□□ -0.75
HLA-DOA-201ENST00000229829 CDK8P49336 464 aa10.37□□□□□ -0.75
HLA-DOA-201ENST00000229829 KIF11P52732 1056 aa10.37□□□□□ -0.75
HLA-DOA-201ENST00000229829 VWA3BQ502W6 1294 aa10.37□□□□□ -0.75
HLA-DOA-201ENST00000229829 CENPPQ6IPU0 288 aa10.37□□□□□ -0.75
HLA-DOA-201ENST00000229829 GALNT17Q6IS24 598 aa10.37□□□□□ -0.75
HLA-DOA-201ENST00000229829 KCNK18Q7Z418 384 aa10.37□□□□□ -0.75
HLA-DOA-201ENST00000229829 EHBP1Q8NDI1 1231 aa10.37□□□□□ -0.75
HLA-DOA-201ENST00000229829 MICAL1Q8TDZ2 1067 aa10.37□□□□□ -0.75
HLA-DOA-201ENST00000229829 COA7Q96BR5 231 aa10.37□□□□□ -0.75
HLA-DOA-201ENST00000229829 PNMA5Q96PV4 448 aa10.37□□□□□ -0.75
HLA-DOA-201ENST00000229829 EYA3Q99504 573 aa10.37□□□□□ -0.75
HLA-DOA-201ENST00000229829 VIPAS39Q9H9C1 493 aa10.37□□□□□ -0.75
HLA-DOA-201ENST00000229829 SNX12Q9UMY4 172 aa10.37□□□□□ -0.75
HLA-DOA-201ENST00000229829 TARSL2A2RTX5 802 aaKnown RBP10.37□□□□□ -0.75
HLA-DOA-201ENST00000229829 LRRC53A6NM62 1247 aa10.37□□□□□ -0.75
HLA-DOA-201ENST00000229829 USP17L5A8MUK1 530 aa10.37□□□□□ -0.75
HLA-DOA-201ENST00000229829 TDP2O95551 362 aa10.37□□□□□ -0.75
HLA-DOA-201ENST00000229829 SEC24CP53992 1094 aa10.37□□□□□ -0.75
HLA-DOA-201ENST00000229829 CKAP4Q07065 602 aaKnown RBP10.37□□□□□ -0.75
HLA-DOA-201ENST00000229829 RRAGAQ7L523 313 aa10.37□□□□□ -0.75
HLA-DOA-201ENST00000229829 KRT25Q7Z3Z0 450 aa10.37□□□□□ -0.75
HLA-DOA-201ENST00000229829 CEP95Q96GE4 821 aa10.37□□□□□ -0.75
HLA-DOA-201ENST00000229829 CUEDC2Q9H467 287 aa10.37□□□□□ -0.75
HLA-DOA-201ENST00000229829 KANSL2Q9H9L4 492 aa10.37□□□□□ -0.75
HLA-DOA-201ENST00000229829 IRAK4Q9NWZ3 460 aa10.37□□□□□ -0.75
HLA-DOA-201ENST00000229829 LOC285556D6RIA3 1793 aa10.37□□□□□ -0.75
HLA-DOA-201ENST00000229829 FRMPD2Q68DX3 1309 aaPredicted RBP10.37□□□□□ -0.75
HLA-DOA-201ENST00000229829 CCDC189A1A4V9 331 aa10.37□□□□□ -0.75
HLA-DOA-201ENST00000229829 RPS6KA5O75582 802 aa10.37□□□□□ -0.75
HLA-DOA-201ENST00000229829 APBA1Q02410 837 aa10.37□□□□□ -0.75
HLA-DOA-201ENST00000229829 GFPT1Q06210 699 aaPredicted RBP10.37□□□□□ -0.75
HLA-DOA-201ENST00000229829 AP1ARQ63HQ0 302 aa10.37□□□□□ -0.75
HLA-DOA-201ENST00000229829 SPTY2D1Q68D10 685 aaPredicted RBP10.37□□□□□ -0.75
HLA-DOA-201ENST00000229829 TMC4Q7Z404 712 aa10.37□□□□□ -0.75
HLA-DOA-201ENST00000229829 CLEC10AQ8IUN9 316 aa10.37□□□□□ -0.75
HLA-DOA-201ENST00000229829 FAM114A1Q8IWE2 563 aa10.37□□□□□ -0.75
HLA-DOA-201ENST00000229829 CCDC47Q96A33 483 aaKnown RBP10.37□□□□□ -0.75
HLA-DOA-201ENST00000229829 SH2D4AQ9H788 454 aa10.37□□□□□ -0.75
HLA-DOA-201ENST00000229829 C6orf50Q9HD87 102 aa10.37□□□□□ -0.75
HLA-DOA-201ENST00000229829 KLC4Q9NSK0 619 aa10.37□□□□□ -0.75
HLA-DOA-201ENST00000229829 CNTNAP4Q9C0A0 1308 aa10.36□□□□□ -0.75
HLA-DOA-201ENST00000229829 ANO9A1A5B4 782 aa10.36□□□□□ -0.75
HLA-DOA-201ENST00000229829 IRF6O14896 467 aa10.36□□□□□ -0.75
HLA-DOA-201ENST00000229829 BUB1O43683 1085 aa10.36□□□□□ -0.75
HLA-DOA-201ENST00000229829 AKR1B10O60218 316 aa10.36□□□□□ -0.75
HLA-DOA-201ENST00000229829 NAP1L1P55209 391 aaKnown RBP10.36□□□□□ -0.75
HLA-DOA-201ENST00000229829 CCDC40Q4G0X9 1142 aa10.36□□□□□ -0.75
HLA-DOA-201ENST00000229829 CNNM4Q6P4Q7 775 aa10.36□□□□□ -0.75
HLA-DOA-201ENST00000229829 FAM196AQ6ZSG2 479 aa10.36□□□□□ -0.75
HLA-DOA-201ENST00000229829 SV2BQ7L1I2 683 aa10.36□□□□□ -0.75
HLA-DOA-201ENST00000229829 FMNL3Q8IVF7 1028 aa10.36□□□□□ -0.75
HLA-DOA-201ENST00000229829 SPZ1Q9BXG8 430 aa10.36□□□□□ -0.75
HLA-DOA-201ENST00000229829 A0A1W2PQJ5 194 aa10.36□□□□□ -0.75
HLA-DOA-201ENST00000229829 E7EVH7 732 aa10.36□□□□□ -0.75
HLA-DOA-201ENST00000229829 ZPR1O75312 459 aa10.36□□□□□ -0.75
HLA-DOA-201ENST00000229829 CPP00450 1065 aa10.36□□□□□ -0.75
HLA-DOA-201ENST00000229829 EIF6P56537 245 aaKnown RBP10.36□□□□□ -0.75
HLA-DOA-201ENST00000229829 GUCY1A3Q02108 690 aa10.36□□□□□ -0.75
HLA-DOA-201ENST00000229829 PPFIA1Q13136 1202 aa10.36□□□□□ -0.75
HLA-DOA-201ENST00000229829 ECM1Q16610 540 aa10.36□□□□□ -0.75
HLA-DOA-201ENST00000229829 FIGNQ5HY92 759 aa10.36□□□□□ -0.75
HLA-DOA-201ENST00000229829 CCDC121Q6ZUS5 278 aa10.36□□□□□ -0.75
HLA-DOA-201ENST00000229829 SPATA4Q8NEY3 305 aa10.36□□□□□ -0.75
HLA-DOA-201ENST00000229829 ZBTB10Q96DT7 871 aa10.36□□□□□ -0.75
HLA-DOA-201ENST00000229829 CALML4Q96GE6 196 aa10.36□□□□□ -0.75
HLA-DOA-201ENST00000229829 MS4A14Q96JA4 679 aa10.36□□□□□ -0.75
HLA-DOA-201ENST00000229829 RPGRIP1Q96KN7 1286 aa10.36□□□□□ -0.75
HLA-DOA-201ENST00000229829 TACO1Q9BSH4 297 aaKnown RBP10.36□□□□□ -0.75
HLA-DOA-201ENST00000229829 NARFQ9UHQ1 456 aa10.36□□□□□ -0.75
HLA-DOA-201ENST00000229829 ROBO3Q96MS0 1386 aa10.36□□□□□ -0.75
HLA-DOA-201ENST00000229829 EP400Q96L91 3159 aa10.36□□□□□ -0.75
HLA-DOA-201ENST00000229829 GNPATO15228 680 aa10.35□□□□□ -0.75
HLA-DOA-201ENST00000229829 BAG3O95817 575 aa10.35□□□□□ -0.75
HLA-DOA-201ENST00000229829 BTDP43251 543 aa10.35□□□□□ -0.75
HLA-DOA-201ENST00000229829 AMPD3Q01432 767 aa10.35□□□□□ -0.75
HLA-DOA-201ENST00000229829 SOGA3Q5TF21 947 aa10.35□□□□□ -0.75
HLA-DOA-201ENST00000229829 TPTE2Q6XPS3 522 aa10.35□□□□□ -0.75
HLA-DOA-201ENST00000229829 B4GALNT4Q76KP1 1039 aa10.35□□□□□ -0.75
HLA-DOA-201ENST00000229829 AMOTL1Q8IY63 956 aa10.35□□□□□ -0.75
HLA-DOA-201ENST00000229829 REXO1Q8N1G1 1221 aaKnown RBP10.35□□□□□ -0.75
HLA-DOA-201ENST00000229829 TRIM58Q8NG06 486 aa10.35□□□□□ -0.75
HLA-DOA-201ENST00000229829 SPDL1Q96EA4 605 aa10.35□□□□□ -0.75
HLA-DOA-201ENST00000229829 MTMR8Q96EF0 704 aa10.35□□□□□ -0.75
HLA-DOA-201ENST00000229829 THOC1Q96FV9 657 aaKnown RBP10.35□□□□□ -0.75
HLA-DOA-201ENST00000229829 MTMR9Q96QG7 549 aa10.35□□□□□ -0.75
HLA-DOA-201ENST00000229829 RTFDC1Q9BY42 306 aaPredicted RBP10.35□□□□□ -0.75
HLA-DOA-201ENST00000229829 KIF9Q9HAQ2 790 aa10.35□□□□□ -0.75
HLA-DOA-201ENST00000229829 NLRC4Q9NPP4 1024 aa10.35□□□□□ -0.75
HLA-DOA-201ENST00000229829 SSC5DA1L4H1 1573 aa10.35□□□□□ -0.75
HLA-DOA-201ENST00000229829 GNA11P29992 359 aa10.35□□□□□ -0.75
HLA-DOA-201ENST00000229829 CDK17Q00537 523 aa10.35□□□□□ -0.75
HLA-DOA-201ENST00000229829 RASSF7Q02833 373 aa10.35□□□□□ -0.75
HLA-DOA-201ENST00000229829 ODF2Q5BJF6 829 aa10.35□□□□□ -0.75
HLA-DOA-201ENST00000229829 FAM182BQ5T319 152 aa10.35□□□□□ -0.75
HLA-DOA-201ENST00000229829 TEX11Q8IYF3 940 aa10.35□□□□□ -0.75
HLA-DOA-201ENST00000229829 WDR66Q8TBY9 1149 aa10.35□□□□□ -0.75
HLA-DOA-201ENST00000229829 AENQ8WTP8 325 aaKnown RBP10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms