RNA–Protein interactions for RNA: ENST00000229384.5

GATC-201, Transcript of glutamyl-tRNA amidotransferase subunit C, humanhuman

TSL 2

Gene GATC, Length 372 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GATC-201ENST00000229384 UBE2SQ16763 222 aa17.14■□□□□ 0.33
GATC-201ENST00000229384 XRRA1Q6P2D8 792 aa17.14■□□□□ 0.33
GATC-201ENST00000229384 LRRC8DQ7L1W4 858 aa17.14■□□□□ 0.33
GATC-201ENST00000229384 SENP7Q9BQF6 1050 aa17.14■□□□□ 0.33
GATC-201ENST00000229384 PRDM12Q9H4Q4 367 aa17.14■□□□□ 0.33
GATC-201ENST00000229384 SIP14410 1827 aa17.14■□□□□ 0.33
GATC-201ENST00000229384 ZBBXA8MT70 800 aa17.13■□□□□ 0.33
GATC-201ENST00000229384 H3BRB1 525 aa17.13■□□□□ 0.33
GATC-201ENST00000229384 ATP9AO75110 1047 aa17.13■□□□□ 0.33
GATC-201ENST00000229384 KCNA2P16389 499 aa17.13■□□□□ 0.33
GATC-201ENST00000229384 ITGB5P18084 799 aa17.13■□□□□ 0.33
GATC-201ENST00000229384 CDC27P30260 824 aa17.13■□□□□ 0.33
GATC-201ENST00000229384 MBTPS1Q14703 1052 aa17.13■□□□□ 0.33
GATC-201ENST00000229384 ZNF618Q5T7W0 954 aa17.13■□□□□ 0.33
GATC-201ENST00000229384 WWC2Q6AWC2 1192 aa17.13■□□□□ 0.33
GATC-201ENST00000229384 CCDC155Q8N6L0 562 aa17.13■□□□□ 0.33
GATC-201ENST00000229384 CCDC136Q96JN2 1154 aa17.13■□□□□ 0.33
GATC-201ENST00000229384 TUT1Q9H6E5 874 aaKnown RBP17.13■□□□□ 0.33
GATC-201ENST00000229384 RBM28Q9NW13 759 aaKnown RBP17.13■□□□□ 0.33
GATC-201ENST00000229384 UBIAD1Q9Y5Z9 338 aa17.13■□□□□ 0.33
GATC-201ENST00000229384 ZBTB43O43298 467 aa17.12■□□□□ 0.33
GATC-201ENST00000229384 ARHGEF15O94989 841 aa17.12■□□□□ 0.33
GATC-201ENST00000229384 SMIM10L2AP0DMW4 78 aa17.12■□□□□ 0.33
GATC-201ENST00000229384 SMIM10L2BP0DMW5 78 aa17.12■□□□□ 0.33
GATC-201ENST00000229384 ACTN1P12814 892 aa17.12■□□□□ 0.33
GATC-201ENST00000229384 HSPA4P34932 840 aa17.12■□□□□ 0.33
GATC-201ENST00000229384 KRT32Q14532 448 aa17.12■□□□□ 0.33
GATC-201ENST00000229384 RTN1Q16799 776 aa17.12■□□□□ 0.33
GATC-201ENST00000229384 HEATR3Q7Z4Q2 680 aa17.12■□□□□ 0.33
GATC-201ENST00000229384 SERINC5Q86VE9 423 aa17.12■□□□□ 0.33
GATC-201ENST00000229384 PHOSPHO2Q8TCD6 241 aa17.12■□□□□ 0.33
GATC-201ENST00000229384 GPRASP2Q96D09 838 aa17.12■□□□□ 0.33
GATC-201ENST00000229384 FTOQ9C0B1 505 aaKnown RBP eCLIP17.12■□□□□ 0.33
GATC-201ENST00000229384 RNPEPQ9H4A4 650 aa17.12■□□□□ 0.33
GATC-201ENST00000229384 PCDHA6Q9UN73 950 aa17.12■□□□□ 0.33
GATC-201ENST00000229384 PCDHA8Q9Y5H6 950 aa17.12■□□□□ 0.33
GATC-201ENST00000229384 SNX14Q9Y5W7 946 aa17.12■□□□□ 0.33
GATC-201ENST00000229384 STXBP3O00186 592 aa17.11■□□□□ 0.33
GATC-201ENST00000229384 ADAM17P78536 824 aa17.11■□□□□ 0.33
GATC-201ENST00000229384 SYNE3Q6ZMZ3 975 aa17.11■□□□□ 0.33
GATC-201ENST00000229384 TRIM50Q86XT4 487 aa17.11■□□□□ 0.33
GATC-201ENST00000229384 SLC9A7Q96T83 725 aa17.11■□□□□ 0.33
GATC-201ENST00000229384 USP26Q9BXU7 913 aa17.11■□□□□ 0.33
GATC-201ENST00000229384 SLC28A3Q9HAS3 691 aa17.11■□□□□ 0.33
GATC-201ENST00000229384 V9GY48 417 aaPredicted RBP17.11■□□□□ 0.33
GATC-201ENST00000229384 WDR81Q562E7 1941 aa17.1■□□□□ 0.33
GATC-201ENST00000229384 LOXHD1Q8IVV2 1947 aa17.1■□□□□ 0.33
GATC-201ENST00000229384 KLF18A0A0U1RQI7 1052 aa17.1■□□□□ 0.33
GATC-201ENST00000229384 TREHO43280 583 aa17.1■□□□□ 0.33
GATC-201ENST00000229384 BAIAP3O94812 1187 aa17.1■□□□□ 0.33
GATC-201ENST00000229384 PARNO95453 639 aaKnown RBP17.1■□□□□ 0.33
GATC-201ENST00000229384 RCAN1P53805 252 aa17.1■□□□□ 0.33
GATC-201ENST00000229384 WDR5P61964 334 aaKnown RBP17.1■□□□□ 0.33
GATC-201ENST00000229384 MKRN4PQ13434 485 aaPredicted RBP17.1■□□□□ 0.33
GATC-201ENST00000229384 NLRX1Q86UT6 975 aa17.1■□□□□ 0.33
GATC-201ENST00000229384 HERC6Q8IVU3 1022 aa17.1■□□□□ 0.33
GATC-201ENST00000229384 FBXL16Q8N461 479 aa17.1■□□□□ 0.33
GATC-201ENST00000229384 COL25A1Q9BXS0 654 aaPredicted RBP17.1■□□□□ 0.33
GATC-201ENST00000229384 AGXT2Q9BYV1 514 aa17.1■□□□□ 0.33
GATC-201ENST00000229384 OSBPL7Q9BZF2 842 aa17.1■□□□□ 0.33
GATC-201ENST00000229384 RIC8AQ9NPQ8 531 aa17.1■□□□□ 0.33
GATC-201ENST00000229384 JADE2Q9NQC1 790 aa17.1■□□□□ 0.33
GATC-201ENST00000229384 A0A0C4DFX4 3053 aa17.1■□□□□ 0.33
GATC-201ENST00000229384 GSTTP1A0A1W2PQM5 241 aa17.09■□□□□ 0.33
GATC-201ENST00000229384 C17orf102A2RUQ5 167 aa17.09■□□□□ 0.33
GATC-201ENST00000229384 GOLGA8AA7E2F4 631 aa17.09■□□□□ 0.33
GATC-201ENST00000229384 GOLGA8BA8MQT2 603 aa17.09■□□□□ 0.33
GATC-201ENST00000229384 NOP56O00567 594 aaKnown RBP17.09■□□□□ 0.33
GATC-201ENST00000229384 HMGB1P09429 215 aaKnown RBP17.09■□□□□ 0.33
GATC-201ENST00000229384 ADD1P35611 737 aaKnown RBP17.09■□□□□ 0.33
GATC-201ENST00000229384 CNKSR3Q6P9H4 555 aa17.09■□□□□ 0.33
GATC-201ENST00000229384 Q6ZUG5 572 aa17.09■□□□□ 0.33
GATC-201ENST00000229384 CYP2W1Q8TAV3 490 aa17.09■□□□□ 0.33
GATC-201ENST00000229384 ATP6V0A1Q93050 837 aa17.09■□□□□ 0.33
GATC-201ENST00000229384 NID2Q14112 1375 aa17.09■□□□□ 0.33
GATC-201ENST00000229384 REV3LO60673 3130 aa17.08■□□□□ 0.33
GATC-201ENST00000229384 EPOPA6NHQ4 379 aa17.08■□□□□ 0.32
GATC-201ENST00000229384 ADAMTS3O15072 1205 aa17.08■□□□□ 0.32
GATC-201ENST00000229384 CA3P07451 260 aa17.08■□□□□ 0.32
GATC-201ENST00000229384 CLK2P49760 499 aaKnown RBP17.08■□□□□ 0.32
GATC-201ENST00000229384 DEFB103AP81534 67 aa17.08■□□□□ 0.32
GATC-201ENST00000229384 TAP1Q03518 808 aa17.08■□□□□ 0.32
GATC-201ENST00000229384 APOBRQ0VD83 1088 aa17.08■□□□□ 0.32
GATC-201ENST00000229384 UTP14CQ5TAP6 766 aaKnown RBP17.08■□□□□ 0.32
GATC-201ENST00000229384 PPP2R2DQ66LE6 453 aa17.08■□□□□ 0.32
GATC-201ENST00000229384 PPP1R18Q6NYC8 613 aa17.08■□□□□ 0.32
GATC-201ENST00000229384 TMCO2Q7Z6W1 182 aaPredicted RBP17.08■□□□□ 0.32
GATC-201ENST00000229384 GIMAP8Q8ND71 665 aaPredicted RBP17.08■□□□□ 0.32
GATC-201ENST00000229384 PGBD1Q96JS3 809 aa17.08■□□□□ 0.32
GATC-201ENST00000229384 JAKMIP1Q96N16 626 aaKnown RBP17.08■□□□□ 0.32
GATC-201ENST00000229384 GAS2L1Q99501 681 aaPredicted RBP17.08■□□□□ 0.32
GATC-201ENST00000229384 SETD4Q9NVD3 440 aa17.08■□□□□ 0.32
GATC-201ENST00000229384 BARHL2Q9NY43 387 aa17.08■□□□□ 0.32
GATC-201ENST00000229384 COL4A4P53420 1690 aaPredicted RBP17.07■□□□□ 0.32
GATC-201ENST00000229384 ABHD14A-ACY1A0A1B0GW23 586 aa17.07■□□□□ 0.32
GATC-201ENST00000229384 SPDYE3A6NKU9 549 aa17.07■□□□□ 0.32
GATC-201ENST00000229384 THPOP40225 353 aa17.07■□□□□ 0.32
GATC-201ENST00000229384 NAPAP54920 295 aa17.07■□□□□ 0.32
GATC-201ENST00000229384 SP4Q02446 784 aa17.07■□□□□ 0.32
GATC-201ENST00000229384 SPRED2Q7Z698 418 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms