RNA–Protein interactions for RNA: ENST00000228251.8

YBX3-201, Transcript of Y-box binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene YBX3, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-201ENST00000228251 TADA3O75528 432 aa21.27■■□□□ 1
YBX3-201ENST00000228251 NDUFA10O95299 355 aa21.27■■□□□ 1
YBX3-201ENST00000228251 PSMC6P62333 389 aa21.27■■□□□ 1
YBX3-201ENST00000228251 ZBED6P86452 979 aa21.27■■□□□ 1
YBX3-201ENST00000228251 SF3B2Q13435 895 aaKnown RBP21.27■■□□□ 1
YBX3-201ENST00000228251 TEPSINQ96N21 525 aa21.27■■□□□ 1
YBX3-201ENST00000228251 POLR3CQ9BUI4 534 aaPredicted RBP21.27■■□□□ 1
YBX3-201ENST00000228251 KCTD10Q9H3F6 313 aa21.27■■□□□ 1
YBX3-201ENST00000228251 NDST4Q9H3R1 872 aa21.27■■□□□ 1
YBX3-201ENST00000228251 MYOZ2Q9NPC6 264 aa21.27■■□□□ 1
YBX3-201ENST00000228251 LZTFL1Q9NQ48 299 aa21.27■■□□□ 1
YBX3-201ENST00000228251 FEM1BQ9UK73 627 aa21.27■■□□□ 1
YBX3-201ENST00000228251 ABL1P00519 1130 aa21.26■□□□□ 0.99
YBX3-201ENST00000228251 ASNSP08243 561 aa21.26■□□□□ 0.99
YBX3-201ENST00000228251 HNRNPH3P31942 346 aaKnown RBP21.26■□□□□ 0.99
YBX3-201ENST00000228251 PTGER2P43116 358 aa21.26■□□□□ 0.99
YBX3-201ENST00000228251 CDK17Q00537 523 aa21.26■□□□□ 0.99
YBX3-201ENST00000228251 NCAPH2Q6IBW4 605 aa21.26■□□□□ 0.99
YBX3-201ENST00000228251 KCTD17Q8N5Z5 321 aa21.26■□□□□ 0.99
YBX3-201ENST00000228251 ERMNQ8TAM6 284 aa21.26■□□□□ 0.99
YBX3-201ENST00000228251 SCFD1Q8WVM8 642 aa21.26■□□□□ 0.99
YBX3-201ENST00000228251 CCDC94Q9BW85 323 aaPredicted RBP21.26■□□□□ 0.99
YBX3-201ENST00000228251 NFKBIEO00221 500 aa21.25■□□□□ 0.99
YBX3-201ENST00000228251 PES1O00541 588 aaKnown RBP21.25■□□□□ 0.99
YBX3-201ENST00000228251 MARSP56192 900 aaKnown RBP21.25■□□□□ 0.99
YBX3-201ENST00000228251 GIT2Q14161 759 aa21.25■□□□□ 0.99
YBX3-201ENST00000228251 ZNF662Q6ZS27 426 aa21.25■□□□□ 0.99
YBX3-201ENST00000228251 SLC5A5Q92911 643 aa21.25■□□□□ 0.99
YBX3-201ENST00000228251 SLF1Q9BQI6 1058 aa21.25■□□□□ 0.99
YBX3-201ENST00000228251 LOXHD1Q8IVV2 1947 aa21.25■□□□□ 0.99
YBX3-201ENST00000228251 GCOM1H8Y6P7 765 aaPredicted RBP21.25■□□□□ 0.99
YBX3-201ENST00000228251 EML1O00423 815 aa21.25■□□□□ 0.99
YBX3-201ENST00000228251 PSMD10O75832 226 aa21.25■□□□□ 0.99
YBX3-201ENST00000228251 SSBP05455 408 aaKnown RBP eCLIP21.25■□□□□ 0.99
YBX3-201ENST00000228251 POLR2MP0CAP2 368 aa21.25■□□□□ 0.99
YBX3-201ENST00000228251 ERCC6LQ2NKX8 1250 aa21.25■□□□□ 0.99
YBX3-201ENST00000228251 CCDC174Q6PII3 467 aa21.25■□□□□ 0.99
YBX3-201ENST00000228251 TSG101Q99816 390 aa21.25■□□□□ 0.99
YBX3-201ENST00000228251 FBXO28Q9NVF7 368 aa21.25■□□□□ 0.99
YBX3-201ENST00000228251 MRPL11Q9Y3B7 192 aaKnown RBP21.25■□□□□ 0.99
YBX3-201ENST00000228251 ZNF536O15090 1300 aa21.24■□□□□ 0.99
YBX3-201ENST00000228251 TRIM21P19474 475 aaKnown RBP21.24■□□□□ 0.99
YBX3-201ENST00000228251 FKBP3Q00688 224 aaKnown RBP21.24■□□□□ 0.99
YBX3-201ENST00000228251 FKBP15Q5T1M5 1219 aa21.24■□□□□ 0.99
YBX3-201ENST00000228251 EPM2AIP1Q7L775 607 aaPredicted RBP21.24■□□□□ 0.99
YBX3-201ENST00000228251 ZNF397Q8NF99 534 aaPredicted RBP21.24■□□□□ 0.99
YBX3-201ENST00000228251 CEP63Q96MT8 703 aa21.24■□□□□ 0.99
YBX3-201ENST00000228251 HSD17B14Q9BPX1 270 aa21.24■□□□□ 0.99
YBX3-201ENST00000228251 CARD6Q9BX69 1037 aa21.24■□□□□ 0.99
YBX3-201ENST00000228251 TAOK3Q9H2K8 898 aa21.24■□□□□ 0.99
YBX3-201ENST00000228251 MYO1AQ9UBC5 1043 aa21.24■□□□□ 0.99
YBX3-201ENST00000228251 KIF5CO60282 957 aa21.23■□□□□ 0.99
YBX3-201ENST00000228251 CFBP00751 764 aa21.23■□□□□ 0.99
YBX3-201ENST00000228251 H2AFXP16104 143 aaPredicted RBP21.23■□□□□ 0.99
YBX3-201ENST00000228251 HERVK_113P62684 666 aa21.23■□□□□ 0.99
YBX3-201ENST00000228251 GHRHRQ02643 423 aa21.23■□□□□ 0.99
YBX3-201ENST00000228251 PPP2R5CQ13362 524 aa21.23■□□□□ 0.99
YBX3-201ENST00000228251 DALRD3Q5D0E6 543 aaKnown RBP21.23■□□□□ 0.99
YBX3-201ENST00000228251 OTOP1Q7RTM1 612 aa21.23■□□□□ 0.99
YBX3-201ENST00000228251 LDHDQ86WU2 507 aa21.23■□□□□ 0.99
YBX3-201ENST00000228251 EIF2AK1Q9BQI3 630 aaKnown RBP21.23■□□□□ 0.99
YBX3-201ENST00000228251 DNM3Q9UQ16 869 aa21.23■□□□□ 0.99
YBX3-201ENST00000228251 DOCK1Q14185 1865 aa21.23■□□□□ 0.99
YBX3-201ENST00000228251 EPHB6O15197 1021 aa21.23■□□□□ 0.99
YBX3-201ENST00000228251 EGFRP00533 1210 aa21.23■□□□□ 0.99
YBX3-201ENST00000228251 CACNB1Q02641 598 aaPredicted RBP21.23■□□□□ 0.99
YBX3-201ENST00000228251 RASA3Q14644 834 aa21.23■□□□□ 0.99
YBX3-201ENST00000228251 HERC4Q5GLZ8 1057 aaPredicted RBP21.23■□□□□ 0.99
YBX3-201ENST00000228251 B3GNT9Q6UX72 402 aa21.23■□□□□ 0.99
YBX3-201ENST00000228251 CCDC84Q86UT8 332 aaPredicted RBP21.23■□□□□ 0.99
YBX3-201ENST00000228251 COL4A3BPQ9Y5P4 624 aa21.23■□□□□ 0.99
YBX3-201ENST00000228251 EFCAB8A8MWE9 144 aa21.22■□□□□ 0.99
YBX3-201ENST00000228251 MEIS1O00470 390 aa21.22■□□□□ 0.99
YBX3-201ENST00000228251 INPP5BP32019 993 aa21.22■□□□□ 0.99
YBX3-201ENST00000228251 HSD17B4P51659 736 aa21.22■□□□□ 0.99
YBX3-201ENST00000228251 PABPC4Q13310 644 aaKnown RBP eCLIP21.22■□□□□ 0.992e-11■■■□□ 14.9
YBX3-201ENST00000228251 ZYXQ15942 572 aaKnown RBP21.22■□□□□ 0.99
YBX3-201ENST00000228251 FBXO38Q6PIJ6 1188 aa21.22■□□□□ 0.99
YBX3-201ENST00000228251 REEP2Q9BRK0 252 aa21.22■□□□□ 0.99
YBX3-201ENST00000228251 EMILIN3Q9NT22 766 aa21.22■□□□□ 0.99
YBX3-201ENST00000228251 RPTORQ8N122 1335 aa21.21■□□□□ 0.99
YBX3-201ENST00000228251 EYA4O95677 639 aa21.21■□□□□ 0.99
YBX3-201ENST00000228251 RPS12P25398 132 aaKnown RBP21.21■□□□□ 0.99
YBX3-201ENST00000228251 HOXD13P35453 343 aa21.21■□□□□ 0.99
YBX3-201ENST00000228251 ZNF76P36508 570 aa21.21■□□□□ 0.99
YBX3-201ENST00000228251 EDRF1Q3B7T1 1238 aa21.21■□□□□ 0.99
YBX3-201ENST00000228251 ARHGAP29Q52LW3 1261 aa21.21■□□□□ 0.99
YBX3-201ENST00000228251 TRIM59Q8IWR1 403 aa21.21■□□□□ 0.99
YBX3-201ENST00000228251 CCDC170Q8IYT3 715 aa21.21■□□□□ 0.99
YBX3-201ENST00000228251 TUFT1Q9NNX1 390 aa21.21■□□□□ 0.99
YBX3-201ENST00000228251 TBC1D7Q9P0N9 293 aa21.21■□□□□ 0.99
YBX3-201ENST00000228251 PLAGL2Q9UPG8 496 aa21.21■□□□□ 0.99
YBX3-201ENST00000228251 EIF3CLB5ME19 914 aaKnown RBP21.2■□□□□ 0.99
YBX3-201ENST00000228251 ICAM1P05362 532 aa21.2■□□□□ 0.99
YBX3-201ENST00000228251 CASP5P51878 434 aa21.2■□□□□ 0.99
YBX3-201ENST00000228251 KCNMA1Q12791 1236 aa21.2■□□□□ 0.99
YBX3-201ENST00000228251 TNIP1Q15025 636 aa21.2■□□□□ 0.99
YBX3-201ENST00000228251 BMT2Q1RMZ1 405 aa21.2■□□□□ 0.99
YBX3-201ENST00000228251 ZNF569Q5MCW4 686 aa21.2■□□□□ 0.99
YBX3-201ENST00000228251 PPP4R3CPQ6ZMV5 832 aa21.2■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms