RNA–Protein interactions for RNA: ENST00000227507.2

CCND1-201, Transcript of cyclin D1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCND1, Length 4,307 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-201ENST00000227507 BAZ2BQ9UIF8 2168 aaKnown RBP12.63□□□□□ -0.39
CCND1-201ENST00000227507 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.63□□□□□ -0.39
CCND1-201ENST00000227507 PP2D1A8MPX8 630 aa12.63□□□□□ -0.39
CCND1-201ENST00000227507 PPP1R37O75864 691 aa12.63□□□□□ -0.39
CCND1-201ENST00000227507 CTNNA1P35221 906 aaKnown RBP12.63□□□□□ -0.39
CCND1-201ENST00000227507 EARS2Q5JPH6 523 aaKnown RBP12.63□□□□□ -0.39
CCND1-201ENST00000227507 GPATCH4Q5T3I0 446 aaKnown RBP12.63□□□□□ -0.39
CCND1-201ENST00000227507 KRT79Q5XKE5 535 aa12.63□□□□□ -0.39
CCND1-201ENST00000227507 MICAL1Q8TDZ2 1067 aa12.63□□□□□ -0.39
CCND1-201ENST00000227507 CAPN6Q9Y6Q1 641 aa12.63□□□□□ -0.39
CCND1-201ENST00000227507 TCP1P17987 556 aaKnown RBP12.62□□□□□ -0.39
CCND1-201ENST00000227507 CDK8P49336 464 aa12.62□□□□□ -0.39
CCND1-201ENST00000227507 CASP7P55210 303 aa12.62□□□□□ -0.39
CCND1-201ENST00000227507 ALS2CLQ60I27 953 aa12.62□□□□□ -0.39
CCND1-201ENST00000227507 MIGA2Q7L4E1 593 aa12.62□□□□□ -0.39
CCND1-201ENST00000227507 CCDC13Q8IYE1 715 aa12.62□□□□□ -0.39
CCND1-201ENST00000227507 TSGA10Q9BZW7 698 aa12.62□□□□□ -0.39
CCND1-201ENST00000227507 RBM12Q9NTZ6 932 aaKnown RBP12.62□□□□□ -0.39
CCND1-201ENST00000227507 LIMA1Q9UHB6 759 aaKnown RBP12.62□□□□□ -0.39
CCND1-201ENST00000227507 SNX12Q9UMY4 172 aa12.62□□□□□ -0.39
CCND1-201ENST00000227507 AHDC1Q5TGY3 1603 aaPredicted RBP12.62□□□□□ -0.39
CCND1-201ENST00000227507 TMOD1P28289 359 aa12.62□□□□□ -0.39
CCND1-201ENST00000227507 TTMPQ5BVD1 217 aa12.62□□□□□ -0.39
CCND1-201ENST00000227507 AP1ARQ63HQ0 302 aa12.62□□□□□ -0.39
CCND1-201ENST00000227507 EMBQ6PCB8 327 aa12.62□□□□□ -0.39
CCND1-201ENST00000227507 CCDC174Q6PII3 467 aa12.62□□□□□ -0.39
CCND1-201ENST00000227507 DTHD1Q6ZMT9 781 aa12.62□□□□□ -0.39
CCND1-201ENST00000227507 ZNF579Q8NAF0 562 aaKnown RBP12.62□□□□□ -0.39
CCND1-201ENST00000227507 NSUN4Q96CB9 384 aaKnown RBP12.62□□□□□ -0.39
CCND1-201ENST00000227507 RSRC1Q96IZ7 334 aaKnown RBP12.62□□□□□ -0.39
CCND1-201ENST00000227507 NOX5Q96PH1 765 aa12.62□□□□□ -0.39
CCND1-201ENST00000227507 BEGAINQ9BUH8 593 aa12.62□□□□□ -0.39
CCND1-201ENST00000227507 SLC40A1Q9NP59 571 aa12.62□□□□□ -0.39
CCND1-201ENST00000227507 DCP1AQ9NPI6 582 aaPredicted RBP12.62□□□□□ -0.39
CCND1-201ENST00000227507 FAM217BQ9NTX9 383 aaPredicted RBP12.62□□□□□ -0.39
CCND1-201ENST00000227507 BCL9LQ86UU0 1499 aa12.62□□□□□ -0.39
CCND1-201ENST00000227507 FRMPD2Q68DX3 1309 aaPredicted RBP12.62□□□□□ -0.39
CCND1-201ENST00000227507 IQCA1LA6NCM1 817 aa12.62□□□□□ -0.39
CCND1-201ENST00000227507 LGALS16A8MUM7 142 aa12.62□□□□□ -0.39
CCND1-201ENST00000227507 CPP00450 1065 aa12.62□□□□□ -0.39
CCND1-201ENST00000227507 CFBP00751 764 aa12.62□□□□□ -0.39
CCND1-201ENST00000227507 IREB2P48200 963 aaKnown RBP12.62□□□□□ -0.39
CCND1-201ENST00000227507 ZNF658Q5TYW1 1059 aaPredicted RBP12.62□□□□□ -0.39
CCND1-201ENST00000227507 GADL1Q6ZQY3 521 aa12.62□□□□□ -0.39
CCND1-201ENST00000227507 KRT25Q7Z3Z0 450 aa12.62□□□□□ -0.39
CCND1-201ENST00000227507 CACNA2D3Q8IZS8 1091 aa12.62□□□□□ -0.39
CCND1-201ENST00000227507 PLEKHA8P1O95397 391 aa12.61□□□□□ -0.39
CCND1-201ENST00000227507 GOLGA8HP0CJ92 632 aa12.61□□□□□ -0.39
CCND1-201ENST00000227507 KRT71Q3SY84 523 aa12.61□□□□□ -0.39
CCND1-201ENST00000227507 CNOT6LQ96LI5 555 aaKnown RBP12.61□□□□□ -0.39
CCND1-201ENST00000227507 TRIM6Q9C030 488 aaPredicted RBP12.61□□□□□ -0.39
CCND1-201ENST00000227507 HOMER2Q9NSB8 354 aa12.61□□□□□ -0.39
CCND1-201ENST00000227507 PNMA2Q9UL42 364 aa12.61□□□□□ -0.39
CCND1-201ENST00000227507 PLAAQ9Y263 795 aa12.61□□□□□ -0.39
CCND1-201ENST00000227507 PCDHA13Q9Y5I0 950 aa12.61□□□□□ -0.39
CCND1-201ENST00000227507 A6NNZ2 444 aa12.61□□□□□ -0.39
CCND1-201ENST00000227507 FLOT1O75955 427 aa12.61□□□□□ -0.39
CCND1-201ENST00000227507 ASNSP08243 561 aa12.61□□□□□ -0.39
CCND1-201ENST00000227507 NONOQ15233 471 aaKnown RBP eCLIP12.61□□□□□ -0.39
CCND1-201ENST00000227507 TUBB8Q3ZCM7 444 aa12.61□□□□□ -0.39
CCND1-201ENST00000227507 REXO1Q8N1G1 1221 aaKnown RBP12.61□□□□□ -0.39
CCND1-201ENST00000227507 UHMK1Q8TAS1 419 aaKnown RBP12.61□□□□□ -0.39
CCND1-201ENST00000227507 ZKSCAN4Q969J2 545 aaPredicted RBP12.61□□□□□ -0.39
CCND1-201ENST00000227507 THOC1Q96FV9 657 aaKnown RBP12.61□□□□□ -0.39
CCND1-201ENST00000227507 EPN3Q9H201 632 aa12.61□□□□□ -0.39
CCND1-201ENST00000227507 LUC7LQ9NQ29 371 aaKnown RBP12.61□□□□□ -0.39
CCND1-201ENST00000227507 CEP104O60308 925 aa12.61□□□□□ -0.39
CCND1-201ENST00000227507 FAM153BP0C7A2 387 aa12.61□□□□□ -0.39
CCND1-201ENST00000227507 FAM153CQ494X1 144 aa12.61□□□□□ -0.39
CCND1-201ENST00000227507 NT5DC1Q5TFE4 455 aa12.61□□□□□ -0.39
CCND1-201ENST00000227507 APOBEC3FQ8IUX4 373 aaKnown RBP12.61□□□□□ -0.39
CCND1-201ENST00000227507 MIEF2Q96C03 454 aa12.61□□□□□ -0.39
CCND1-201ENST00000227507 TSG101Q99816 390 aa12.61□□□□□ -0.39
CCND1-201ENST00000227507 IRAK4Q9NWZ3 460 aa12.61□□□□□ -0.39
CCND1-201ENST00000227507 FAM153AQ9UHL3 310 aa12.61□□□□□ -0.39
CCND1-201ENST00000227507 FOXP2O15409 715 aa12.61□□□□□ -0.39
CCND1-201ENST00000227507 PAPD7Q5XG87 772 aaKnown RBP12.61□□□□□ -0.39
CCND1-201ENST00000227507 APTXQ7Z2E3 356 aaKnown RBP12.61□□□□□ -0.39
CCND1-201ENST00000227507 DYDC1Q8WWB3 177 aa12.61□□□□□ -0.39
CCND1-201ENST00000227507 TBCAO75347 108 aaKnown RBP12.6□□□□□ -0.39
CCND1-201ENST00000227507 LIFRP42702 1097 aa12.6□□□□□ -0.39
CCND1-201ENST00000227507 KIF11P52732 1056 aa12.6□□□□□ -0.39
CCND1-201ENST00000227507 ASPRV1Q53RT3 343 aa12.6□□□□□ -0.39
CCND1-201ENST00000227507 STXBP4Q6ZWJ1 553 aa12.6□□□□□ -0.39
CCND1-201ENST00000227507 HPS3Q969F9 1004 aa12.6□□□□□ -0.39
CCND1-201ENST00000227507 VIMP08670 466 aaKnown RBP12.6□□□□□ -0.39
CCND1-201ENST00000227507 ZBED6P86452 979 aa12.6□□□□□ -0.39
CCND1-201ENST00000227507 FAM114A1Q8IWE2 563 aa12.6□□□□□ -0.39
CCND1-201ENST00000227507 PARP9Q8IXQ6 854 aa12.6□□□□□ -0.39
CCND1-201ENST00000227507 MSL3Q8N5Y2 521 aaKnown RBP12.6□□□□□ -0.39
CCND1-201ENST00000227507 UIMC1Q96RL1 719 aa12.6□□□□□ -0.39
CCND1-201ENST00000227507 PAGR1Q9BTK6 254 aa12.6□□□□□ -0.39
CCND1-201ENST00000227507 SLC39A2Q9NP94 309 aa12.6□□□□□ -0.39
CCND1-201ENST00000227507 NOVA2Q9UNW9 492 aaKnown RBP12.6□□□□□ -0.39
CCND1-201ENST00000227507 KIF4AO95239 1232 aa12.6□□□□□ -0.39
CCND1-201ENST00000227507 PMS1P54277 932 aaKnown RBP12.6□□□□□ -0.39
CCND1-201ENST00000227507 ALX1Q15699 326 aa12.6□□□□□ -0.39
CCND1-201ENST00000227507 TMEM179Q6ZVK1 233 aa12.6□□□□□ -0.39
CCND1-201ENST00000227507 DYMQ7RTS9 669 aa12.6□□□□□ -0.39
CCND1-201ENST00000227507 SPICE1Q8N0Z3 855 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms