RNA–Protein interactions for RNA: ENST00000225983.10

HDAC5-201, Transcript of histone deacetylase 5, humanhuman

APPRIS P3 TSL 5 BASIC

Gene HDAC5, Length 5,326 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-201ENST00000225983 TMEM47Q9BQJ4 181 aa17.57■□□□□ 0.4
HDAC5-201ENST00000225983 ABCA6Q8N139 1617 aa17.57■□□□□ 0.4
HDAC5-201ENST00000225983 RNF8O76064 485 aa17.57■□□□□ 0.4
HDAC5-201ENST00000225983 SLC12A2P55011 1212 aa17.57■□□□□ 0.4
HDAC5-201ENST00000225983 TMC4Q7Z404 712 aa17.57■□□□□ 0.4
HDAC5-201ENST00000225983 NSMCE1Q8WV22 266 aa17.57■□□□□ 0.4
HDAC5-201ENST00000225983 AP1M1Q9BXS5 423 aa17.57■□□□□ 0.4
HDAC5-201ENST00000225983 BHMT2Q9H2M3 363 aa17.57■□□□□ 0.4
HDAC5-201ENST00000225983 SH3GLB2Q9NR46 395 aa17.57■□□□□ 0.4
HDAC5-201ENST00000225983 ADAMTS1Q9UHI8 967 aa17.57■□□□□ 0.4
HDAC5-201ENST00000225983 ADGRL3Q9HAR2 1447 aa17.56■□□□□ 0.4
HDAC5-201ENST00000225983 ZNF335Q9H4Z2 1342 aaPredicted RBP17.56■□□□□ 0.4
HDAC5-201ENST00000225983 FAM47CQ5HY64 1035 aa17.56■□□□□ 0.4
HDAC5-201ENST00000225983 AFAP1L2Q8N4X5 818 aa17.56■□□□□ 0.4
HDAC5-201ENST00000225983 CELF1Q92879 486 aaKnown RBP17.56■□□□□ 0.4
HDAC5-201ENST00000225983 USP27XA6NNY8 438 aa17.56■□□□□ 0.4
HDAC5-201ENST00000225983 GIPC1O14908 333 aa17.56■□□□□ 0.4
HDAC5-201ENST00000225983 IFRD2Q12894 506 aaPredicted RBP17.56■□□□□ 0.4
HDAC5-201ENST00000225983 FAM160B1Q5W0V3 765 aa17.56■□□□□ 0.4
HDAC5-201ENST00000225983 TRPC5Q9UL62 973 aaPredicted RBP17.56■□□□□ 0.4
HDAC5-201ENST00000225983 BPIFB4P59827 614 aa17.56■□□□□ 0.4
HDAC5-201ENST00000225983 RNF10Q8N5U6 811 aaKnown RBP17.56■□□□□ 0.4
HDAC5-201ENST00000225983 SGK1O00141 431 aa17.56■□□□□ 0.4
HDAC5-201ENST00000225983 CHGBP05060 677 aa17.56■□□□□ 0.4
HDAC5-201ENST00000225983 LRRC63Q05C16 580 aa17.56■□□□□ 0.4
HDAC5-201ENST00000225983 SLC7A3Q8WY07 619 aa17.56■□□□□ 0.4
HDAC5-201ENST00000225983 H7C0C1 242 aa17.55■□□□□ 0.4
HDAC5-201ENST00000225983 TXNDC9O14530 226 aa17.55■□□□□ 0.4
HDAC5-201ENST00000225983 SH3BP5O60239 455 aa17.55■□□□□ 0.4
HDAC5-201ENST00000225983 ATP5OP48047 213 aa17.55■□□□□ 0.4
HDAC5-201ENST00000225983 RASSF2P50749 326 aa17.55■□□□□ 0.4
HDAC5-201ENST00000225983 SARNPP82979 210 aaKnown RBP17.55■□□□□ 0.4
HDAC5-201ENST00000225983 SGO2Q562F6 1265 aa17.55■□□□□ 0.4
HDAC5-201ENST00000225983 INTS9Q9NV88 658 aaKnown RBP17.55■□□□□ 0.4
HDAC5-201ENST00000225983 MAD1L1Q9Y6D9 718 aa17.55■□□□□ 0.4
HDAC5-201ENST00000225983 SETD1BQ9UPS6 1966 aaKnown RBP17.55■□□□□ 0.4
HDAC5-201ENST00000225983 YWHAGP61981 247 aaKnown RBP eCLIP17.55■□□□□ 0.4
HDAC5-201ENST00000225983 DHX9Q08211 1270 aaKnown RBP17.55■□□□□ 0.4
HDAC5-201ENST00000225983 ZNF579Q8NAF0 562 aaKnown RBP17.55■□□□□ 0.4
HDAC5-201ENST00000225983 APOL6Q9BWW8 343 aa17.55■□□□□ 0.4
HDAC5-201ENST00000225983 TMEM206Q9H813 350 aa17.55■□□□□ 0.4
HDAC5-201ENST00000225983 FOXN1O15353 648 aa17.55■□□□□ 0.4
HDAC5-201ENST00000225983 SRGAP2O75044 1071 aa17.55■□□□□ 0.4
HDAC5-201ENST00000225983 DMTNQ08495 405 aa17.55■□□□□ 0.4
HDAC5-201ENST00000225983 IFT88Q13099 833 aa17.55■□□□□ 0.4
HDAC5-201ENST00000225983 CASP8Q14790 479 aa17.55■□□□□ 0.4
HDAC5-201ENST00000225983 CLEC4GQ6UXB4 293 aa17.55■□□□□ 0.4
HDAC5-201ENST00000225983 DHX40Q8IX18 779 aaKnown RBP17.55■□□□□ 0.4
HDAC5-201ENST00000225983 NME8Q8N427 588 aa17.55■□□□□ 0.4
HDAC5-201ENST00000225983 BBOF1Q8ND07 529 aa17.55■□□□□ 0.4
HDAC5-201ENST00000225983 VCX3BQ9H321 246 aa17.55■□□□□ 0.4
HDAC5-201ENST00000225983 GOLGA8IPA6NC78 632 aa17.55■□□□□ 0.4
HDAC5-201ENST00000225983 GOLGA8JA6NMD2 632 aa17.55■□□□□ 0.4
HDAC5-201ENST00000225983 SEPT2Q15019 361 aa17.55■□□□□ 0.4
HDAC5-201ENST00000225983 RFX6Q8HWS3 928 aa17.55■□□□□ 0.4
HDAC5-201ENST00000225983 DCP1AQ9NPI6 582 aaPredicted RBP17.55■□□□□ 0.4
HDAC5-201ENST00000225983 PNMA2Q9UL42 364 aa17.55■□□□□ 0.4
HDAC5-201ENST00000225983 PRCPP42785 496 aa17.54■□□□□ 0.4
HDAC5-201ENST00000225983 ABHD10Q9NUJ1 306 aa17.54■□□□□ 0.4
HDAC5-201ENST00000225983 NBPF26B4DH59 902 aa17.54■□□□□ 0.4
HDAC5-201ENST00000225983 NBPF10Q6P3W6 841 aaKnown RBP17.54■□□□□ 0.4
HDAC5-201ENST00000225983 NBPF15Q8N660 670 aa17.54■□□□□ 0.4
HDAC5-201ENST00000225983 RIPOR2Q9Y4F9 1068 aa17.54■□□□□ 0.4
HDAC5-201ENST00000225983 CPDO75976 1380 aa17.54■□□□□ 0.4
HDAC5-201ENST00000225983 GSG1L2A8MUP6 293 aa17.54■□□□□ 0.4
HDAC5-201ENST00000225983 VGLL3A8MV65 326 aa17.54■□□□□ 0.4
HDAC5-201ENST00000225983 GOLGA8SH3BPF8 625 aa17.54■□□□□ 0.4
HDAC5-201ENST00000225983 INO80B-WBP1J3KQ70 363 aa17.54■□□□□ 0.4
HDAC5-201ENST00000225983 CLTAP09496 248 aa17.54■□□□□ 0.4
HDAC5-201ENST00000225983 SLCO1A2P46721 670 aa17.54■□□□□ 0.4
HDAC5-201ENST00000225983 PIGOQ8TEQ8 1089 aa17.54■□□□□ 0.4
HDAC5-201ENST00000225983 INO80BQ9C086 356 aaPredicted RBP17.54■□□□□ 0.4
HDAC5-201ENST00000225983 CYP4F22Q6NT55 531 aa17.54■□□□□ 0.4
HDAC5-201ENST00000225983 ISCA1Q9BUE6 129 aa17.54■□□□□ 0.4
HDAC5-201ENST00000225983 CDHR2Q9BYE9 1310 aa17.54■□□□□ 0.4
HDAC5-201ENST00000225983 RFX7Q2KHR2 1363 aa17.54■□□□□ 0.4
HDAC5-201ENST00000225983 MXI1P50539 228 aa17.53■□□□□ 0.4
HDAC5-201ENST00000225983 TRIP13Q15645 432 aaPredicted RBP17.53■□□□□ 0.4
HDAC5-201ENST00000225983 SPATS2Q86XZ4 545 aaKnown RBP17.53■□□□□ 0.4
HDAC5-201ENST00000225983 HAUS1Q96CS2 278 aa17.53■□□□□ 0.4
HDAC5-201ENST00000225983 WDR19Q8NEZ3 1342 aa17.53■□□□□ 0.4
HDAC5-201ENST00000225983 ARHGAP42A6NI28 874 aa17.53■□□□□ 0.4
HDAC5-201ENST00000225983 CYP19A1P11511 503 aaPredicted RBP17.53■□□□□ 0.4
HDAC5-201ENST00000225983 NNTQ13423 1086 aa17.53■□□□□ 0.4
HDAC5-201ENST00000225983 PPP2R5AQ15172 486 aa17.53■□□□□ 0.4
HDAC5-201ENST00000225983 MTERF2Q49AM1 385 aa17.53■□□□□ 0.4
HDAC5-201ENST00000225983 CLEC17AQ6ZS10 378 aa17.53■□□□□ 0.4
HDAC5-201ENST00000225983 ARHGAP27Q6ZUM4 889 aa17.53■□□□□ 0.4
HDAC5-201ENST00000225983 SLC17A8Q8NDX2 589 aa17.53■□□□□ 0.4
HDAC5-201ENST00000225983 POLD4Q9HCU8 107 aa17.53■□□□□ 0.4
HDAC5-201ENST00000225983 TMEM260Q9NX78 707 aa17.53■□□□□ 0.4
HDAC5-201ENST00000225983 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.53■□□□□ 0.4
HDAC5-201ENST00000225983 PNMA6AP0CW24 399 aaPredicted RBP17.53■□□□□ 0.4
HDAC5-201ENST00000225983 SAT1P21673 171 aa17.53■□□□□ 0.4
HDAC5-201ENST00000225983 GYS2P54840 703 aa17.53■□□□□ 0.4
HDAC5-201ENST00000225983 SHC4Q6S5L8 630 aa17.53■□□□□ 0.4
HDAC5-201ENST00000225983 RUNDC3BQ96NL0 473 aa17.53■□□□□ 0.4
HDAC5-201ENST00000225983 FAM196BA6NMK8 535 aa17.53■□□□□ 0.4
HDAC5-201ENST00000225983 ECEL1O95672 775 aa17.53■□□□□ 0.4
HDAC5-201ENST00000225983 EIF2AK2P19525 551 aaKnown RBP17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms