RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 ALG1Q9BT22 464 aa14.47□□□□□ -0.09
LSM5-201ENST00000223084 PCDHA4Q9UN74 947 aa14.47□□□□□ -0.09
LSM5-201ENST00000223084 FAM86B1E9PN63 330 aa14.46□□□□□ -0.09
LSM5-201ENST00000223084 EDIL3O43854 480 aa14.46□□□□□ -0.09
LSM5-201ENST00000223084 CD2BP2O95400 341 aaKnown RBP14.46□□□□□ -0.09
LSM5-201ENST00000223084 FAM86B2P0C5J1 330 aa14.46□□□□□ -0.09
LSM5-201ENST00000223084 ATXN8OSP0DMR3 200 aa14.46□□□□□ -0.09
LSM5-201ENST00000223084 MAGEA10P43363 369 aaPredicted RBP14.46□□□□□ -0.09
LSM5-201ENST00000223084 MDM2Q00987 491 aaPredicted RBP14.46□□□□□ -0.09
LSM5-201ENST00000223084 CEP55Q53EZ4 464 aa14.46□□□□□ -0.09
LSM5-201ENST00000223084 METTL7BQ6UX53 244 aa14.46□□□□□ -0.09
LSM5-201ENST00000223084 CRYGNQ8WXF5 182 aa14.46□□□□□ -0.09
LSM5-201ENST00000223084 ZSCAN31Q96LW9 406 aaPredicted RBP14.46□□□□□ -0.09
LSM5-201ENST00000223084 TOX2Q96NM4 488 aa14.46□□□□□ -0.09
LSM5-201ENST00000223084 SENP7Q9BQF6 1050 aa14.46□□□□□ -0.09
LSM5-201ENST00000223084 PHF20Q9BVI0 1012 aa14.46□□□□□ -0.09
LSM5-201ENST00000223084 TRPV6Q9H1D0 765 aa14.46□□□□□ -0.09
LSM5-201ENST00000223084 KCNH7Q9NS40 1196 aa14.46□□□□□ -0.09
LSM5-201ENST00000223084 TMEM39AQ9NV64 488 aa14.46□□□□□ -0.09
LSM5-201ENST00000223084 PRKAG2Q9UGJ0 569 aa14.46□□□□□ -0.09
LSM5-201ENST00000223084 COLQQ9Y215 455 aaPredicted RBP14.46□□□□□ -0.09
LSM5-201ENST00000223084 M0R2N6 131 aa14.45□□□□□ -0.1
LSM5-201ENST00000223084 MEIS1O00470 390 aa14.45□□□□□ -0.1
LSM5-201ENST00000223084 NOP56O00567 594 aaKnown RBP14.45□□□□□ -0.1
LSM5-201ENST00000223084 B4GALT4O60513 344 aa14.45□□□□□ -0.1
LSM5-201ENST00000223084 CD4P01730 458 aa14.45□□□□□ -0.1
LSM5-201ENST00000223084 CYP3A4P08684 503 aa14.45□□□□□ -0.1
LSM5-201ENST00000223084 HOXD8P13378 290 aaPredicted RBP14.45□□□□□ -0.1
LSM5-201ENST00000223084 ITGB8P26012 769 aa14.45□□□□□ -0.1
LSM5-201ENST00000223084 FAM47CQ5HY64 1035 aa14.45□□□□□ -0.1
LSM5-201ENST00000223084 MCTP2Q6DN12 878 aa14.45□□□□□ -0.1
LSM5-201ENST00000223084 PLA2G4DQ86XP0 818 aa14.45□□□□□ -0.1
LSM5-201ENST00000223084 DAGLBQ8NCG7 672 aa14.45□□□□□ -0.1
LSM5-201ENST00000223084 OXER1Q8TDS5 423 aa14.45□□□□□ -0.1
LSM5-201ENST00000223084 WASF1Q92558 559 aa14.45□□□□□ -0.1
LSM5-201ENST00000223084 CDHR1Q96JP9 859 aa14.45□□□□□ -0.1
LSM5-201ENST00000223084 GPR20Q99678 358 aa14.45□□□□□ -0.1
LSM5-201ENST00000223084 MROH7Q68CQ1 1323 aa14.44□□□□□ -0.1
LSM5-201ENST00000223084 TRIOBPQ9H2D6 2365 aa14.44□□□□□ -0.1
LSM5-201ENST00000223084 ST18O60284 1047 aa14.44□□□□□ -0.1
LSM5-201ENST00000223084 PPFIA4O75335 1185 aa14.44□□□□□ -0.1
LSM5-201ENST00000223084 XBP1P17861 261 aa14.44□□□□□ -0.1
LSM5-201ENST00000223084 PSEN2P49810 448 aa14.44□□□□□ -0.1
LSM5-201ENST00000223084 UTP14CQ5TAP6 766 aaKnown RBP14.44□□□□□ -0.1
LSM5-201ENST00000223084 GALNT17Q6IS24 598 aa14.44□□□□□ -0.1
LSM5-201ENST00000223084 TBCKQ8TEA7 893 aa14.44□□□□□ -0.1
LSM5-201ENST00000223084 BADQ92934 168 aa14.44□□□□□ -0.1
LSM5-201ENST00000223084 GDF15Q99988 308 aa14.44□□□□□ -0.1
LSM5-201ENST00000223084 AGO4Q9HCK5 861 aaKnown RBP14.44□□□□□ -0.1
LSM5-201ENST00000223084 SH2B1Q9NRF2 756 aaPredicted RBP14.44□□□□□ -0.1
LSM5-201ENST00000223084 TRMT13Q9NUP7 481 aaKnown RBP14.44□□□□□ -0.1
LSM5-201ENST00000223084 IGLV3-22A0A075B6J6 115 aa14.43□□□□□ -0.1
LSM5-201ENST00000223084 KIAA0355O15063 1070 aa14.43□□□□□ -0.1
LSM5-201ENST00000223084 TLR3O15455 904 aaKnown RBP14.43□□□□□ -0.1
LSM5-201ENST00000223084 MAFGO15525 162 aa14.43□□□□□ -0.1
LSM5-201ENST00000223084 LGALS2P05162 132 aa14.43□□□□□ -0.1
LSM5-201ENST00000223084 ITGB3BPQ13352 177 aaPredicted RBP14.43□□□□□ -0.1
LSM5-201ENST00000223084 MFSD10Q14728 455 aa14.43□□□□□ -0.1
LSM5-201ENST00000223084 KIAA0753Q2KHM9 967 aa14.43□□□□□ -0.1
LSM5-201ENST00000223084 PRR16Q569H4 304 aa14.43□□□□□ -0.1
LSM5-201ENST00000223084 NFRKBQ6P4R8 1299 aa14.43□□□□□ -0.1
LSM5-201ENST00000223084 TRIM50Q86XT4 487 aa14.43□□□□□ -0.1
LSM5-201ENST00000223084 FAM177A1Q8N128 213 aaPredicted RBP14.43□□□□□ -0.1
LSM5-201ENST00000223084 GIMAP8Q8ND71 665 aaPredicted RBP14.43□□□□□ -0.1
LSM5-201ENST00000223084 LBHD1Q9BQE6 289 aaPredicted RBP14.43□□□□□ -0.1
LSM5-201ENST00000223084 C16orf70Q9BSU1 422 aa14.43□□□□□ -0.1
LSM5-201ENST00000223084 PRO3102Q9H379 93 aa14.43□□□□□ -0.1
LSM5-201ENST00000223084 TBX21Q9UL17 535 aa14.43□□□□□ -0.1
LSM5-201ENST00000223084 LTBP2Q14767 1821 aa14.43□□□□□ -0.1
LSM5-201ENST00000223084 TRIP12Q14669 1992 aaPredicted RBP14.42□□□□□ -0.1
LSM5-201ENST00000223084 GSTTP1A0A1W2PQM5 241 aa14.42□□□□□ -0.1
LSM5-201ENST00000223084 DDX39AO00148 427 aaKnown RBP14.42□□□□□ -0.1
LSM5-201ENST00000223084 HAS3O00219 553 aa14.42□□□□□ -0.1
LSM5-201ENST00000223084 F2P00734 622 aa14.42□□□□□ -0.1
LSM5-201ENST00000223084 CYP2C9P11712 490 aa14.42□□□□□ -0.1
LSM5-201ENST00000223084 RAG1P15918 1043 aa14.42□□□□□ -0.1
LSM5-201ENST00000223084 CIITAP33076 1130 aa14.42□□□□□ -0.1
LSM5-201ENST00000223084 GUCY1B3Q02153 619 aa14.42□□□□□ -0.1
LSM5-201ENST00000223084 INF2Q27J81 1249 aa14.42□□□□□ -0.1
LSM5-201ENST00000223084 EARS2Q5JPH6 523 aaKnown RBP14.42□□□□□ -0.1
LSM5-201ENST00000223084 NIPA1Q7RTP0 329 aa14.42□□□□□ -0.1
LSM5-201ENST00000223084 LLPHQ9BRT6 129 aaKnown RBP14.42□□□□□ -0.1
LSM5-201ENST00000223084 SEZ6LQ9BYH1 1024 aa14.42□□□□□ -0.1
LSM5-201ENST00000223084 PPP1R12CQ9BZL4 782 aa14.42□□□□□ -0.1
LSM5-201ENST00000223084 JPH1Q9HDC5 661 aaPredicted RBP14.42□□□□□ -0.1
LSM5-201ENST00000223084 HDAC6Q9UBN7 1215 aa14.42□□□□□ -0.1
LSM5-201ENST00000223084 SLC9A2Q9UBY0 812 aa14.42□□□□□ -0.1
LSM5-201ENST00000223084 UMODL1Q5DID0 1318 aa14.41□□□□□ -0.1
LSM5-201ENST00000223084 FAM205CA6NFA0 338 aa14.41□□□□□ -0.1
LSM5-201ENST00000223084 TDP2O95551 362 aa14.41□□□□□ -0.1
LSM5-201ENST00000223084 TCF7P36402 384 aaPredicted RBP14.41□□□□□ -0.1
LSM5-201ENST00000223084 USP11P51784 963 aa14.41□□□□□ -0.1
LSM5-201ENST00000223084 ZNF200P98182 395 aaPredicted RBP14.41□□□□□ -0.1
LSM5-201ENST00000223084 NR5A1Q13285 461 aa14.41□□□□□ -0.1
LSM5-201ENST00000223084 NONOQ15233 471 aaKnown RBP eCLIP14.41□□□□□ -0.1
LSM5-201ENST00000223084 KRT40Q6A162 431 aa14.41□□□□□ -0.1
LSM5-201ENST00000223084 GDF6Q6KF10 455 aaPredicted RBP14.41□□□□□ -0.1
LSM5-201ENST00000223084 PIK3AP1Q6ZUJ8 805 aa14.41□□□□□ -0.1
LSM5-201ENST00000223084 KRT25Q7Z3Z0 450 aa14.41□□□□□ -0.1
LSM5-201ENST00000223084 SEPT1Q8WYJ6 367 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms