RNA–Protein interactions for RNA: ENST00000221922.10

CCDC9-201, Transcript of coiled-coil domain containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC9, Length 2,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-201ENST00000221922 USP17L18D6R9N7 530 aa24.61■■□□□ 1.53
CCDC9-201ENST00000221922 USP17L22D6RA61 530 aa24.61■■□□□ 1.53
CCDC9-201ENST00000221922 USP17L17D6RBQ6 530 aa24.61■■□□□ 1.53
CCDC9-201ENST00000221922 USP17L19D6RCP7 530 aa24.61■■□□□ 1.53
CCDC9-201ENST00000221922 USP17L20D6RJB6 530 aa24.61■■□□□ 1.53
CCDC9-201ENST00000221922 IDEP14735 1019 aa24.61■■□□□ 1.53
CCDC9-201ENST00000221922 CYP3A7P24462 503 aa24.61■■□□□ 1.53
CCDC9-201ENST00000221922 EHHADHQ08426 723 aa24.61■■□□□ 1.53
CCDC9-201ENST00000221922 USP17L24Q0WX57 530 aa24.61■■□□□ 1.53
CCDC9-201ENST00000221922 SF3B2Q13435 895 aaKnown RBP24.61■■□□□ 1.53
CCDC9-201ENST00000221922 SPDYE2Q495Y8 402 aa24.61■■□□□ 1.53
CCDC9-201ENST00000221922 FKBP1CQ5VVH2 108 aa24.61■■□□□ 1.53
CCDC9-201ENST00000221922 USP17L6PQ6QN14 398 aa24.61■■□□□ 1.53
CCDC9-201ENST00000221922 SAR1BQ9Y6B6 198 aa24.61■■□□□ 1.53
CCDC9-201ENST00000221922 KRT86O43790 486 aa24.6■■□□□ 1.53
CCDC9-201ENST00000221922 SLFN12Q8IYM2 578 aa24.6■■□□□ 1.53
CCDC9-201ENST00000221922 MBOAT7Q96N66 472 aa24.6■■□□□ 1.53
CCDC9-201ENST00000221922 TSG101Q99816 390 aa24.6■■□□□ 1.53
CCDC9-201ENST00000221922 NHEJ1Q9H9Q4 299 aaPredicted RBP24.6■■□□□ 1.53
CCDC9-201ENST00000221922 SUGCTQ9HAC7 445 aa24.6■■□□□ 1.53
CCDC9-201ENST00000221922 CNTNAP1P78357 1384 aa24.6■■□□□ 1.53
CCDC9-201ENST00000221922 MEIS2O14770 477 aa24.6■■□□□ 1.53
CCDC9-201ENST00000221922 ATP1A1P05023 1023 aaKnown RBP24.6■■□□□ 1.53
CCDC9-201ENST00000221922 CASP8Q14790 479 aa24.6■■□□□ 1.53
CCDC9-201ENST00000221922 KCNK18Q7Z418 384 aa24.6■■□□□ 1.53
CCDC9-201ENST00000221922 FBXO11Q86XK2 927 aa24.6■■□□□ 1.53
CCDC9-201ENST00000221922 MTMR14Q8NCE2 650 aa24.6■■□□□ 1.53
CCDC9-201ENST00000221922 JAKMIP2Q96AA8 810 aa24.6■■□□□ 1.53
CCDC9-201ENST00000221922 PCMTD1Q96MG8 357 aaPredicted RBP24.6■■□□□ 1.53
CCDC9-201ENST00000221922 CLRN2A0PK11 232 aa24.59■■□□□ 1.53
CCDC9-201ENST00000221922 ENC1O14682 589 aa24.59■■□□□ 1.53
CCDC9-201ENST00000221922 MMP14P50281 582 aa24.59■■□□□ 1.53
CCDC9-201ENST00000221922 USP14P54578 494 aa24.59■■□□□ 1.53
CCDC9-201ENST00000221922 KIAA1328Q86T90 577 aa24.59■■□□□ 1.53
CCDC9-201ENST00000221922 RPGRIP1Q96KN7 1286 aa24.59■■□□□ 1.53
CCDC9-201ENST00000221922 PURBQ96QR8 312 aaKnown RBP24.59■■□□□ 1.53
CCDC9-201ENST00000221922 KCNMB3Q9NPA1 279 aa24.59■■□□□ 1.53
CCDC9-201ENST00000221922 HDAC6Q9UBN7 1215 aa24.59■■□□□ 1.53
CCDC9-201ENST00000221922 A0A1W2PRG0 241 aa24.58■■□□□ 1.53
CCDC9-201ENST00000221922 KLK7P49862 253 aa24.58■■□□□ 1.53
CCDC9-201ENST00000221922 MUM1L1Q5H9M0 696 aa24.58■■□□□ 1.53
CCDC9-201ENST00000221922 AGBL3Q8NEM8 1001 aa24.58■■□□□ 1.53
CCDC9-201ENST00000221922 CRYGNQ8WXF5 182 aa24.58■■□□□ 1.53
CCDC9-201ENST00000221922 ARHGEF10LQ9HCE6 1279 aa24.58■■□□□ 1.53
CCDC9-201ENST00000221922 ZNRF3Q9ULT6 936 aa24.58■■□□□ 1.53
CCDC9-201ENST00000221922 TFR2Q9UP52 801 aa24.58■■□□□ 1.53
CCDC9-201ENST00000221922 GYS2P54840 703 aa24.58■■□□□ 1.53
CCDC9-201ENST00000221922 ECM1Q16610 540 aa24.58■■□□□ 1.53
CCDC9-201ENST00000221922 MAN2A1Q16706 1144 aa24.58■■□□□ 1.53
CCDC9-201ENST00000221922 VWA3BQ502W6 1294 aa24.58■■□□□ 1.53
CCDC9-201ENST00000221922 EEF2KMTQ96G04 330 aa24.58■■□□□ 1.53
CCDC9-201ENST00000221922 LACRTQ9GZZ8 138 aa24.58■■□□□ 1.53
CCDC9-201ENST00000221922 ANO9A1A5B4 782 aa24.57■■□□□ 1.52
CCDC9-201ENST00000221922 RCCD1A6NED2 376 aa24.57■■□□□ 1.52
CCDC9-201ENST00000221922 IKQ13123 557 aaPredicted RBP24.57■■□□□ 1.52
CCDC9-201ENST00000221922 DEFB132Q7Z7B7 95 aa24.57■■□□□ 1.52
CCDC9-201ENST00000221922 DNAJC19Q96DA6 116 aa24.57■■□□□ 1.52
CCDC9-201ENST00000221922 MMS19Q96T76 1030 aa24.57■■□□□ 1.52
CCDC9-201ENST00000221922 FOSP01100 380 aaPredicted RBP24.57■■□□□ 1.52
CCDC9-201ENST00000221922 HNRNPH3P31942 346 aaKnown RBP24.57■■□□□ 1.52
CCDC9-201ENST00000221922 COASYQ13057 564 aa24.57■■□□□ 1.52
CCDC9-201ENST00000221922 TEX2Q8IWB9 1127 aa24.57■■□□□ 1.52
CCDC9-201ENST00000221922 NIM1KQ8IY84 436 aa24.57■■□□□ 1.52
CCDC9-201ENST00000221922 MYOCDQ8IZQ8 938 aa24.57■■□□□ 1.52
CCDC9-201ENST00000221922 TMX2Q9Y320 296 aa24.57■■□□□ 1.52
CCDC9-201ENST00000221922 IPO7O95373 1038 aaKnown RBP24.56■■□□□ 1.52
CCDC9-201ENST00000221922 MCM3P25205 808 aa24.56■■□□□ 1.52
CCDC9-201ENST00000221922 CKAP4Q07065 602 aaKnown RBP24.56■■□□□ 1.52
CCDC9-201ENST00000221922 CCDC84Q86UT8 332 aaPredicted RBP24.56■■□□□ 1.52
CCDC9-201ENST00000221922 PANK4Q9NVE7 773 aa24.56■■□□□ 1.52
CCDC9-201ENST00000221922 ZBTB12Q9Y330 459 aaPredicted RBP24.56■■□□□ 1.52
CCDC9-201ENST00000221922 TARSL2A2RTX5 802 aaKnown RBP24.55■■□□□ 1.52
CCDC9-201ENST00000221922 TBX3O15119 743 aa24.55■■□□□ 1.52
CCDC9-201ENST00000221922 TBC1D12O60347 775 aa24.55■■□□□ 1.52
CCDC9-201ENST00000221922 HAUS3Q68CZ6 603 aa24.55■■□□□ 1.52
CCDC9-201ENST00000221922 FAM83AQ86UY5 434 aa24.55■■□□□ 1.52
CCDC9-201ENST00000221922 CCDC65Q8IXS2 484 aa24.55■■□□□ 1.52
CCDC9-201ENST00000221922 NDST4Q9H3R1 872 aa24.55■■□□□ 1.52
CCDC9-201ENST00000221922 VIPAS39Q9H9C1 493 aa24.55■■□□□ 1.52
CCDC9-201ENST00000221922 ZBTB21Q9ULJ3 1066 aa24.55■■□□□ 1.52
CCDC9-201ENST00000221922 STK24Q9Y6E0 443 aa24.55■■□□□ 1.52
CCDC9-201ENST00000221922 ARHGAP4P98171 946 aa24.55■■□□□ 1.52
CCDC9-201ENST00000221922 FAM26FQ5R3K3 315 aa24.55■■□□□ 1.52
CCDC9-201ENST00000221922 VPS18Q9P253 973 aa24.55■■□□□ 1.52
CCDC9-201ENST00000221922 N4BP1O75113 896 aaKnown RBP24.54■■□□□ 1.52
CCDC9-201ENST00000221922 TRAF1Q13077 416 aa24.54■■□□□ 1.52
CCDC9-201ENST00000221922 LRRC55Q6ZSA7 311 aa24.54■■□□□ 1.52
CCDC9-201ENST00000221922 GJA10Q969M2 543 aa24.54■■□□□ 1.52
CCDC9-201ENST00000221922 GOPCQ9HD26 462 aa24.54■■□□□ 1.52
CCDC9-201ENST00000221922 PRR12Q9ULL5 1215 aa24.54■■□□□ 1.52
CCDC9-201ENST00000221922 KIAA1024Q9UPX6 916 aa24.54■■□□□ 1.52
CCDC9-201ENST00000221922 SPDYE3A6NKU9 549 aa24.54■■□□□ 1.52
CCDC9-201ENST00000221922 LRRIQ3A6PVS8 624 aaPredicted RBP24.54■■□□□ 1.52
CCDC9-201ENST00000221922 SRGAP2O75044 1071 aa24.54■■□□□ 1.52
CCDC9-201ENST00000221922 PLA2G4BP0C869 781 aa24.54■■□□□ 1.52
CCDC9-201ENST00000221922 SREBF1P36956 1147 aa24.54■■□□□ 1.52
CCDC9-201ENST00000221922 STAT2P52630 851 aa24.54■■□□□ 1.52
CCDC9-201ENST00000221922 VAV2P52735 878 aa24.54■■□□□ 1.52
CCDC9-201ENST00000221922 SNAP25P60880 206 aa24.54■■□□□ 1.52
CCDC9-201ENST00000221922 Q4G0T1 1027 aa24.54■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms