RNA–Protein interactions for RNA: ENST00000220959.8

UBR5-201, Transcript of ubiquitin protein ligase E3 component n-recognin 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBR5, Length 9,418 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR5-201ENST00000220959 KRT80Q6KB66 452 aa16.05■□□□□ 0.16
UBR5-201ENST00000220959 TRMT10CQ7L0Y3 403 aaKnown RBP16.05■□□□□ 0.16
UBR5-201ENST00000220959 NR1H4Q96RI1 486 aaPredicted RBP16.05■□□□□ 0.16
UBR5-201ENST00000220959 TRIM15Q9C019 465 aa16.05■□□□□ 0.16
UBR5-201ENST00000220959 BTBD18B2RXH4 712 aa16.05■□□□□ 0.16
UBR5-201ENST00000220959 KIF19Q2TAC6 998 aa16.05■□□□□ 0.16
UBR5-201ENST00000220959 ZNF496Q96IT1 587 aaPredicted RBP16.05■□□□□ 0.16
UBR5-201ENST00000220959 USP28Q96RU2 1077 aa16.05■□□□□ 0.16
UBR5-201ENST00000220959 ESRRBO95718 433 aa16.05■□□□□ 0.16
UBR5-201ENST00000220959 LRRC8AQ8IWT6 810 aa16.05■□□□□ 0.16
UBR5-201ENST00000220959 AK8Q96MA6 479 aa16.05■□□□□ 0.16
UBR5-201ENST00000220959 STAT2P52630 851 aa16.05■□□□□ 0.16
UBR5-201ENST00000220959 TTC19Q6DKK2 380 aaPredicted RBP16.05■□□□□ 0.16
UBR5-201ENST00000220959 ZNF827Q17R98 1081 aa16.04■□□□□ 0.16
UBR5-201ENST00000220959 MTERF2Q49AM1 385 aa16.04■□□□□ 0.16
UBR5-201ENST00000220959 HINFPQ9BQA5 517 aa16.04■□□□□ 0.16
UBR5-201ENST00000220959 SUGT1Q9Y2Z0 365 aa16.04■□□□□ 0.16
UBR5-201ENST00000220959 ZBBXA8MT70 800 aa16.04■□□□□ 0.16
UBR5-201ENST00000220959 FGAP02671 866 aa16.04■□□□□ 0.16
UBR5-201ENST00000220959 RECQLP46063 649 aaPredicted RBP16.04■□□□□ 0.16
UBR5-201ENST00000220959 ANKRD13CQ8N6S4 541 aa16.04■□□□□ 0.16
UBR5-201ENST00000220959 TBX22Q9Y458 520 aa16.04■□□□□ 0.16
UBR5-201ENST00000220959 THEM5Q8N1Q8 247 aa16.04■□□□□ 0.16
UBR5-201ENST00000220959 HEXIM2Q96MH2 286 aaKnown RBP16.04■□□□□ 0.16
UBR5-201ENST00000220959 ABCA10Q8WWZ4 1543 aa16.04■□□□□ 0.16
UBR5-201ENST00000220959 HSPD1P10809 573 aaKnown RBP16.04■□□□□ 0.16
UBR5-201ENST00000220959 OSTNP61366 133 aa16.04■□□□□ 0.16
UBR5-201ENST00000220959 CLIC2O15247 247 aa16.04■□□□□ 0.16
UBR5-201ENST00000220959 KCTD16Q68DU8 428 aa16.04■□□□□ 0.16
UBR5-201ENST00000220959 ELMOD1Q8N336 334 aa16.04■□□□□ 0.16
UBR5-201ENST00000220959 RPSAP08865 295 aaKnown RBP16.04■□□□□ 0.16
UBR5-201ENST00000220959 IL13P35225 146 aa16.04■□□□□ 0.16
UBR5-201ENST00000220959 NLGN1Q8N2Q7 840 aa16.04■□□□□ 0.16
UBR5-201ENST00000220959 LEMD3Q9Y2U8 911 aa16.04■□□□□ 0.16
UBR5-201ENST00000220959 GNL1P36915 607 aaPredicted RBP16.04■□□□□ 0.16
UBR5-201ENST00000220959 NDUFA8P51970 172 aa16.04■□□□□ 0.16
UBR5-201ENST00000220959 PACSIN2Q9UNF0 486 aaPredicted RBP16.04■□□□□ 0.16
UBR5-201ENST00000220959 EDC4Q6P2E9 1401 aaKnown RBP16.04■□□□□ 0.16
UBR5-201ENST00000220959 ECEL1O95672 775 aa16.03■□□□□ 0.16
UBR5-201ENST00000220959 ZC3H15Q8WU90 426 aaKnown RBP16.03■□□□□ 0.16
UBR5-201ENST00000220959 TEX12Q9BXU0 123 aa16.03■□□□□ 0.16
UBR5-201ENST00000220959 FBXO41Q8TF61 875 aa16.03■□□□□ 0.16
UBR5-201ENST00000220959 UPF3AQ9H1J1 476 aaKnown RBP16.03■□□□□ 0.16
UBR5-201ENST00000220959 EEF2KMTQ96G04 330 aa16.03■□□□□ 0.16
UBR5-201ENST00000220959 UBE2TQ9NPD8 197 aaPredicted RBP16.03■□□□□ 0.16
UBR5-201ENST00000220959 PCDHA4Q9UN74 947 aa16.03■□□□□ 0.16
UBR5-201ENST00000220959 CHL1O00533 1208 aa16.03■□□□□ 0.16
UBR5-201ENST00000220959 PTK2BQ14289 1009 aa16.03■□□□□ 0.16
UBR5-201ENST00000220959 RWDD4Q6NW29 188 aaKnown RBP16.03■□□□□ 0.16
UBR5-201ENST00000220959 ZBTB18Q99592 522 aa16.03■□□□□ 0.16
UBR5-201ENST00000220959 SLC7A5P2Q9GIP4 190 aa16.03■□□□□ 0.16
UBR5-201ENST00000220959 PIK3C2GO75747 1445 aa16.03■□□□□ 0.16
UBR5-201ENST00000220959 SRGAP2CP0DJJ0 459 aa16.03■□□□□ 0.16
UBR5-201ENST00000220959 PEX19P40855 299 aa16.03■□□□□ 0.16
UBR5-201ENST00000220959 LIG3P49916 1009 aa16.03■□□□□ 0.16
UBR5-201ENST00000220959 ADCY1Q08828 1119 aa16.03■□□□□ 0.16
UBR5-201ENST00000220959 LMBRD1Q9NUN5 540 aa16.03■□□□□ 0.16
UBR5-201ENST00000220959 ATP8A1Q9Y2Q0 1164 aa16.03■□□□□ 0.16
UBR5-201ENST00000220959 EPB41L5Q9HCM4 733 aa16.03■□□□□ 0.16
UBR5-201ENST00000220959 PFKFB2O60825 505 aa16.02■□□□□ 0.16
UBR5-201ENST00000220959 PIP4K2CQ8TBX8 421 aa16.02■□□□□ 0.16
UBR5-201ENST00000220959 PRAG1Q86YV5 1406 aa16.02■□□□□ 0.16
UBR5-201ENST00000220959 EIF4A1P60842 406 aaKnown RBP16.02■□□□□ 0.16
UBR5-201ENST00000220959 CAPRIN1Q14444 709 aaKnown RBP16.02■□□□□ 0.16
UBR5-201ENST00000220959 TAF11Q15544 211 aa16.02■□□□□ 0.16
UBR5-201ENST00000220959 PDXDC2PQ6P474 469 aa16.02■□□□□ 0.16
UBR5-201ENST00000220959 XDHP47989 1333 aa16.02■□□□□ 0.16
UBR5-201ENST00000220959 ZKSCAN8Q15776 578 aaPredicted RBP16.02■□□□□ 0.16
UBR5-201ENST00000220959 FASTKD5Q7L8L6 764 aaKnown RBP16.02■□□□□ 0.16
UBR5-201ENST00000220959 EEPD1Q7L9B9 569 aa16.02■□□□□ 0.16
UBR5-201ENST00000220959 CLIC4Q9Y696 253 aa16.02■□□□□ 0.16
UBR5-201ENST00000220959 PARD3Q8TEW0 1356 aa16.02■□□□□ 0.16
UBR5-201ENST00000220959 DDX17Q92841 729 aaKnown RBP16.02■□□□□ 0.16
UBR5-201ENST00000220959 ZNF212Q9UDV6 495 aa16.02■□□□□ 0.16
UBR5-201ENST00000220959 TBK1Q9UHD2 729 aa16.02■□□□□ 0.16
UBR5-201ENST00000220959 UHRF1BP1Q6BDS2 1440 aa16.02■□□□□ 0.16
UBR5-201ENST00000220959 PLTPP55058 493 aa16.02■□□□□ 0.15
UBR5-201ENST00000220959 HPCAL4Q9UM19 191 aa16.02■□□□□ 0.15
UBR5-201ENST00000220959 ZMYM3Q14202 1370 aa16.02■□□□□ 0.15
UBR5-201ENST00000220959 TAC1P20366 129 aa16.02■□□□□ 0.15
UBR5-201ENST00000220959 KRT27Q7Z3Y8 459 aa16.02■□□□□ 0.15
UBR5-201ENST00000220959 EXT2Q93063 718 aa16.02■□□□□ 0.15
UBR5-201ENST00000220959 DHTKD1Q96HY7 919 aaPredicted RBP16.02■□□□□ 0.15
UBR5-201ENST00000220959 GCFC2P16383 781 aaKnown RBP16.02■□□□□ 0.15
UBR5-201ENST00000220959 IFT88Q13099 833 aa16.02■□□□□ 0.15
UBR5-201ENST00000220959 NLRP4Q96MN2 994 aa16.02■□□□□ 0.15
UBR5-201ENST00000220959 INPP5FQ9Y2H2 1132 aa16.02■□□□□ 0.15
UBR5-201ENST00000220959 CFLARO15519 480 aa16.01■□□□□ 0.15
UBR5-201ENST00000220959 BMP3P12645 472 aa16.01■□□□□ 0.15
UBR5-201ENST00000220959 PPP1R16BQ96T49 567 aa16.01■□□□□ 0.15
UBR5-201ENST00000220959 G3BP2Q9UN86 482 aaKnown RBP16.01■□□□□ 0.15
UBR5-201ENST00000220959 HMGXB3Q12766 1538 aa16.01■□□□□ 0.15
UBR5-201ENST00000220959 THOC2Q8NI27 1593 aaKnown RBP16.01■□□□□ 0.15
UBR5-201ENST00000220959 MARK3P27448 753 aa16.01■□□□□ 0.15
UBR5-201ENST00000220959 ZC3H12BQ5HYM0 836 aaKnown RBP16.01■□□□□ 0.15
UBR5-201ENST00000220959 CD58P19256 250 aa16.01■□□□□ 0.15
UBR5-201ENST00000220959 HSPH1Q92598 858 aa16.01■□□□□ 0.15
UBR5-201ENST00000220959 SCINQ9Y6U3 715 aa16.01■□□□□ 0.15
UBR5-201ENST00000220959 RBM46Q8TBY0 533 aaKnown RBP16.01■□□□□ 0.15
UBR5-201ENST00000220959 PBKQ96KB5 322 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms