RNA–Protein interactions for RNA: ENST00000218348.7

USP11-201, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USP11, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-201ENST00000218348 RLFQ13129 1914 aa11.08□□□□□ -0.64
USP11-201ENST00000218348 TTC26A0AVF1 554 aa11.08□□□□□ -0.64
USP11-201ENST00000218348 SFI1A8K8P3 1242 aa11.08□□□□□ -0.64
USP11-201ENST00000218348 MFAP3LO75121 409 aa11.08□□□□□ -0.64
USP11-201ENST00000218348 TRIM21P19474 475 aaKnown RBP11.08□□□□□ -0.64
USP11-201ENST00000218348 PABPC4Q13310 644 aaKnown RBP eCLIP11.08□□□□□ -0.642e-11■■■■□ 21.4
USP11-201ENST00000218348 GIMAP8Q8ND71 665 aaPredicted RBP11.08□□□□□ -0.64
USP11-201ENST00000218348 BORCS6Q96GS4 357 aa11.08□□□□□ -0.64
USP11-201ENST00000218348 CNOT6LQ96LI5 555 aaKnown RBP11.08□□□□□ -0.64
USP11-201ENST00000218348 CTAGE1Q96RT6 745 aa11.08□□□□□ -0.64
USP11-201ENST00000218348 DUSP9Q99956 384 aaKnown RBP11.08□□□□□ -0.64
USP11-201ENST00000218348 PYM1Q9BRP8 204 aaKnown RBP11.08□□□□□ -0.64
USP11-201ENST00000218348 FAM207AQ9NSI2 230 aaPredicted RBP11.08□□□□□ -0.64
USP11-201ENST00000218348 PLIN4Q96Q06 1357 aa11.08□□□□□ -0.64
USP11-201ENST00000218348 SPDYE3A6NKU9 549 aa11.08□□□□□ -0.64
USP11-201ENST00000218348 DDX39AO00148 427 aaKnown RBP11.08□□□□□ -0.64
USP11-201ENST00000218348 ZSCAN12O43309 604 aa11.08□□□□□ -0.64
USP11-201ENST00000218348 ENTPD3O75355 529 aa11.08□□□□□ -0.64
USP11-201ENST00000218348 PRPHP41219 470 aa11.08□□□□□ -0.64
USP11-201ENST00000218348 PSMC6P62333 389 aa11.08□□□□□ -0.64
USP11-201ENST00000218348 SYCP1Q15431 976 aa11.08□□□□□ -0.64
USP11-201ENST00000218348 TBC1D10BQ4KMP7 808 aaPredicted RBP11.08□□□□□ -0.64
USP11-201ENST00000218348 SYDE2Q5VT97 1194 aa11.08□□□□□ -0.64
USP11-201ENST00000218348 TRIM65Q6PJ69 517 aa11.08□□□□□ -0.64
USP11-201ENST00000218348 MNS1Q8NEH6 495 aa11.08□□□□□ -0.64
USP11-201ENST00000218348 P2RX5Q93086 422 aa11.08□□□□□ -0.64
USP11-201ENST00000218348 FEZ1Q99689 392 aa11.08□□□□□ -0.64
USP11-201ENST00000218348 NOC4LQ9BVI4 516 aaKnown RBP11.08□□□□□ -0.64
USP11-201ENST00000218348 THSD7BQ9C0I4 1608 aa11.08□□□□□ -0.64
USP11-201ENST00000218348 LAD1O00515 517 aa11.07□□□□□ -0.64
USP11-201ENST00000218348 STX10O60499 249 aa11.07□□□□□ -0.64
USP11-201ENST00000218348 RHOBTB3O94955 611 aa11.07□□□□□ -0.64
USP11-201ENST00000218348 SLU7O95391 586 aaKnown RBP11.07□□□□□ -0.64
USP11-201ENST00000218348 ERVK-24P63145 666 aa11.07□□□□□ -0.64
USP11-201ENST00000218348 GABPB1Q06547 395 aaPredicted RBP11.07□□□□□ -0.64
USP11-201ENST00000218348 CRACR2AQ9BSW2 395 aa11.07□□□□□ -0.64
USP11-201ENST00000218348 EHD4Q9H223 541 aa11.07□□□□□ -0.64
USP11-201ENST00000218348 SEMA6BQ9H3T3 888 aa11.07□□□□□ -0.64
USP11-201ENST00000218348 BMP2KQ9NSY1 1161 aaPredicted RBP11.07□□□□□ -0.64
USP11-201ENST00000218348 OGFRQ9NZT2 677 aa11.07□□□□□ -0.64
USP11-201ENST00000218348 HACL1Q9UJ83 578 aa11.07□□□□□ -0.64
USP11-201ENST00000218348 KIF3CO14782 793 aa11.07□□□□□ -0.64
USP11-201ENST00000218348 ZBTB39O15060 712 aa11.07□□□□□ -0.64
USP11-201ENST00000218348 CASQ1P31415 396 aa11.07□□□□□ -0.64
USP11-201ENST00000218348 EPHX2P34913 555 aa11.07□□□□□ -0.64
USP11-201ENST00000218348 GTF2F1P35269 517 aaKnown RBP eCLIP11.07□□□□□ -0.64
USP11-201ENST00000218348 ARHGAP4P98171 946 aa11.07□□□□□ -0.64
USP11-201ENST00000218348 APBA1Q02410 837 aa11.07□□□□□ -0.64
USP11-201ENST00000218348 ZNF569Q5MCW4 686 aa11.07□□□□□ -0.64
USP11-201ENST00000218348 TTI2Q6NXR4 508 aa11.07□□□□□ -0.64
USP11-201ENST00000218348 AK8Q96MA6 479 aa11.07□□□□□ -0.64
USP11-201ENST00000218348 SH2D3AQ9BRG2 576 aa11.07□□□□□ -0.64
USP11-201ENST00000218348 AMNQ9BXJ7 453 aa11.07□□□□□ -0.64
USP11-201ENST00000218348 RAB34Q9BZG1 259 aa11.07□□□□□ -0.64
USP11-201ENST00000218348 RGL1Q9NZL6 768 aa11.07□□□□□ -0.64
USP11-201ENST00000218348 PUF60Q9UHX1 559 aaKnown RBP11.07□□□□□ -0.64
USP11-201ENST00000218348 PRR12Q9ULL5 1215 aa11.07□□□□□ -0.64
USP11-201ENST00000218348 SUFUQ9UMX1 484 aa11.07□□□□□ -0.64
USP11-201ENST00000218348 MYH4Q9Y623 1939 aa11.07□□□□□ -0.64
USP11-201ENST00000218348 PHF20L1A8MW92 1017 aa11.07□□□□□ -0.64
USP11-201ENST00000218348 H7C1D1 291 aa11.07□□□□□ -0.64
USP11-201ENST00000218348 MEIS2O14770 477 aa11.07□□□□□ -0.64
USP11-201ENST00000218348 AMPD3Q01432 767 aa11.07□□□□□ -0.64
USP11-201ENST00000218348 PRKG1Q13976 671 aa11.07□□□□□ -0.64
USP11-201ENST00000218348 ARHGAP29Q52LW3 1261 aa11.07□□□□□ -0.64
USP11-201ENST00000218348 HERC4Q5GLZ8 1057 aaPredicted RBP11.07□□□□□ -0.64
USP11-201ENST00000218348 PIGOQ8TEQ8 1089 aa11.07□□□□□ -0.64
USP11-201ENST00000218348 ZC3H15Q8WU90 426 aaKnown RBP11.07□□□□□ -0.64
USP11-201ENST00000218348 MMRN2Q9H8L6 949 aa11.07□□□□□ -0.64
USP11-201ENST00000218348 ESYT2A0FGR8 921 aa11.06□□□□□ -0.64
USP11-201ENST00000218348 FAM86B1E9PN63 330 aa11.06□□□□□ -0.64
USP11-201ENST00000218348 CCDC175P0C221 793 aa11.06□□□□□ -0.64
USP11-201ENST00000218348 FAM86B2P0C5J1 330 aa11.06□□□□□ -0.64
USP11-201ENST00000218348 TEX35Q5T0J7 233 aa11.06□□□□□ -0.64
USP11-201ENST00000218348 TATDN1Q6P1N9 297 aa11.06□□□□□ -0.64
USP11-201ENST00000218348 MAEAQ7L5Y9 396 aa11.06□□□□□ -0.64
USP11-201ENST00000218348 GPBP1Q86WP2 473 aa11.06□□□□□ -0.64
USP11-201ENST00000218348 SMCR8Q8TEV9 937 aaPredicted RBP11.06□□□□□ -0.64
USP11-201ENST00000218348 RAD54LQ92698 747 aa11.06□□□□□ -0.64
USP11-201ENST00000218348 RASSF4Q9H2L5 321 aa11.06□□□□□ -0.64
USP11-201ENST00000218348 IKZF4Q9H2S9 585 aa11.06□□□□□ -0.64
USP11-201ENST00000218348 ST7Q9NRC1 585 aa11.06□□□□□ -0.64
USP11-201ENST00000218348 NYAP2Q9P242 653 aa11.06□□□□□ -0.64
USP11-201ENST00000218348 GUCA1BQ9UMX6 200 aa11.06□□□□□ -0.64
USP11-201ENST00000218348 MED24O75448 989 aa11.06□□□□□ -0.64
USP11-201ENST00000218348 CYP27A1Q02318 531 aa11.06□□□□□ -0.64
USP11-201ENST00000218348 PPP2R5AQ15172 486 aa11.06□□□□□ -0.64
USP11-201ENST00000218348 DLK2Q6UY11 383 aa11.06□□□□□ -0.64
USP11-201ENST00000218348 MB21D1Q8N884 522 aa11.06□□□□□ -0.64
USP11-201ENST00000218348 FAM151AQ8WW52 585 aa11.06□□□□□ -0.64
USP11-201ENST00000218348 NMRK2Q9NPI5 230 aa11.06□□□□□ -0.64
USP11-201ENST00000218348 ABHD10Q9NUJ1 306 aa11.06□□□□□ -0.64
USP11-201ENST00000218348 LIMA1Q9UHB6 759 aaKnown RBP11.06□□□□□ -0.64
USP11-201ENST00000218348 TRAF5O00463 557 aa11.06□□□□□ -0.64
USP11-201ENST00000218348 CTIFO43310 598 aaKnown RBP11.06□□□□□ -0.64
USP11-201ENST00000218348 ARID5AQ03989 594 aa11.06□□□□□ -0.64
USP11-201ENST00000218348 CEP120Q8N960 986 aa11.06□□□□□ -0.64
USP11-201ENST00000218348 NOC3LQ8WTT2 800 aaKnown RBP11.06□□□□□ -0.64
USP11-201ENST00000218348 HDAC9Q9UKV0 1011 aa11.06□□□□□ -0.64
USP11-201ENST00000218348 LUC7L2Q9Y383 392 aaKnown RBP11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms