RNA–Protein interactions for RNA: ENST00000217402.2

CHMP4B-201, Transcript of charged multivesicular body protein 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4B, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4B-201ENST00000217402 LAD1O00515 517 aa30.79■■■□□ 2.52
CHMP4B-201ENST00000217402 GAS7O60861 476 aa30.79■■■□□ 2.52
CHMP4B-201ENST00000217402 YEATS4O95619 227 aa30.79■■■□□ 2.52
CHMP4B-201ENST00000217402 GGPS1O95749 300 aa30.79■■■□□ 2.52
CHMP4B-201ENST00000217402 AKR1A1P14550 325 aa30.79■■■□□ 2.52
CHMP4B-201ENST00000217402 SDF4Q9BRK5 362 aa30.79■■■□□ 2.52
CHMP4B-201ENST00000217402 MYCP01106 439 aaPredicted RBP30.78■■■□□ 2.52
CHMP4B-201ENST00000217402 DUSP28Q4G0W2 176 aa30.78■■■□□ 2.52
CHMP4B-201ENST00000217402 CYFIP1Q7L576 1253 aa30.78■■■□□ 2.52
CHMP4B-201ENST00000217402 SENP7Q9BQF6 1050 aa30.78■■■□□ 2.52
CHMP4B-201ENST00000217402 SPTLC2O15270 562 aa30.77■■■□□ 2.52
CHMP4B-201ENST00000217402 SEPT4O43236 478 aa30.77■■■□□ 2.52
CHMP4B-201ENST00000217402 SP4Q02446 784 aa30.77■■■□□ 2.52
CHMP4B-201ENST00000217402 NEDD9Q14511 834 aa30.77■■■□□ 2.52
CHMP4B-201ENST00000217402 SPATA32Q96LK8 384 aa30.77■■■□□ 2.52
CHMP4B-201ENST00000217402 RIT2Q99578 217 aa30.77■■■□□ 2.52
CHMP4B-201ENST00000217402 TEKT3Q9BXF9 490 aa30.77■■■□□ 2.52
CHMP4B-201ENST00000217402 TTC12Q9H892 705 aaPredicted RBP30.77■■■□□ 2.52
CHMP4B-201ENST00000217402 TBC1D22BQ9NU19 505 aa30.77■■■□□ 2.52
CHMP4B-201ENST00000217402 DHX15O43143 795 aaKnown RBP30.76■■■□□ 2.52
CHMP4B-201ENST00000217402 PSMD10O75832 226 aa30.76■■■□□ 2.52
CHMP4B-201ENST00000217402 LEO1Q8WVC0 666 aaPredicted RBP30.76■■■□□ 2.52
CHMP4B-201ENST00000217402 PRPHP41219 470 aa30.76■■■□□ 2.51
CHMP4B-201ENST00000217402 DHX37Q8IY37 1157 aaKnown RBP30.76■■■□□ 2.51
CHMP4B-201ENST00000217402 GIMAP8Q8ND71 665 aaPredicted RBP30.76■■■□□ 2.51
CHMP4B-201ENST00000217402 SCAND2PQ9GZW5 306 aaPredicted RBP30.76■■■□□ 2.51
CHMP4B-201ENST00000217402 MLXIPQ9HAP2 919 aa30.76■■■□□ 2.51
CHMP4B-201ENST00000217402 JPH1Q9HDC5 661 aaPredicted RBP30.76■■■□□ 2.51
CHMP4B-201ENST00000217402 HMX1Q9NP08 348 aaPredicted RBP30.76■■■□□ 2.51
CHMP4B-201ENST00000217402 PCDHA12Q9UN75 941 aa30.76■■■□□ 2.51
CHMP4B-201ENST00000217402 NFASCO94856 1347 aa30.75■■■□□ 2.51
CHMP4B-201ENST00000217402 VWA3AA6NCI4 1184 aa30.75■■■□□ 2.51
CHMP4B-201ENST00000217402 CHMP2AO43633 222 aa30.75■■■□□ 2.51
CHMP4B-201ENST00000217402 IL17AQ16552 155 aa30.75■■■□□ 2.51
CHMP4B-201ENST00000217402 CELF3Q5SZQ8 465 aaKnown RBP30.75■■■□□ 2.51
CHMP4B-201ENST00000217402 ARL6IP4Q66PJ3 421 aaKnown RBP30.75■■■□□ 2.51
CHMP4B-201ENST00000217402 DTHD1Q6ZMT9 781 aa30.75■■■□□ 2.51
CHMP4B-201ENST00000217402 VAV3Q9UKW4 847 aa30.75■■■□□ 2.51
CHMP4B-201ENST00000217402 DOCK5Q9H7D0 1870 aa30.75■■■□□ 2.51
CHMP4B-201ENST00000217402 FARP2O94887 1054 aaPredicted RBP30.74■■■□□ 2.51
CHMP4B-201ENST00000217402 GH1P01241 217 aa30.74■■■□□ 2.51
CHMP4B-201ENST00000217402 TECP42680 631 aa30.74■■■□□ 2.51
CHMP4B-201ENST00000217402 ARHGAP1Q07960 439 aa30.74■■■□□ 2.51
CHMP4B-201ENST00000217402 KCNG4Q8TDN1 519 aa30.74■■■□□ 2.51
CHMP4B-201ENST00000217402 TCEAL9Q9UHQ7 104 aa30.74■■■□□ 2.51
CHMP4B-201ENST00000217402 RCOR1Q9UKL0 485 aa30.74■■■□□ 2.51
CHMP4B-201ENST00000217402 GNEQ9Y223 722 aaKnown RBP30.74■■■□□ 2.51
CHMP4B-201ENST00000217402 TCHHQ07283 1943 aa30.73■■■□□ 2.51
CHMP4B-201ENST00000217402 NKRFO15226 690 aaKnown RBP eCLIP30.73■■■□□ 2.51
CHMP4B-201ENST00000217402 TMEM266Q2M3C6 531 aa30.73■■■□□ 2.51
CHMP4B-201ENST00000217402 METTL7BQ6UX53 244 aa30.73■■■□□ 2.51
CHMP4B-201ENST00000217402 TLK2Q86UE8 772 aa30.73■■■□□ 2.51
CHMP4B-201ENST00000217402 UNC93B1Q9H1C4 597 aa30.73■■■□□ 2.51
CHMP4B-201ENST00000217402 UNC45AQ9H3U1 944 aa30.73■■■□□ 2.51
CHMP4B-201ENST00000217402 SLC9A2Q9UBY0 812 aa30.73■■■□□ 2.51
CHMP4B-201ENST00000217402 FBXO2Q9UK22 296 aaPredicted RBP30.73■■■□□ 2.51
CHMP4B-201ENST00000217402 TELO2Q9Y4R8 837 aa30.73■■■□□ 2.51
CHMP4B-201ENST00000217402 ME1P48163 572 aa30.73■■■□□ 2.51
CHMP4B-201ENST00000217402 GRIN1Q05586 938 aa30.73■■■□□ 2.51
CHMP4B-201ENST00000217402 MTFR1Q15390 333 aa30.73■■■□□ 2.51
CHMP4B-201ENST00000217402 OR6J1Q8NGC5 347 aa30.73■■■□□ 2.51
CHMP4B-201ENST00000217402 POTEMA6NI47 508 aa30.72■■■□□ 2.51
CHMP4B-201ENST00000217402 DYNC1LI2O43237 492 aaPredicted RBP30.72■■■□□ 2.51
CHMP4B-201ENST00000217402 CCNE2O96020 404 aa30.72■■■□□ 2.51
CHMP4B-201ENST00000217402 RARBP10826 455 aa30.72■■■□□ 2.51
CHMP4B-201ENST00000217402 SPATA33Q96N06 139 aa30.72■■■□□ 2.51
CHMP4B-201ENST00000217402 XRN2Q9H0D6 950 aaKnown RBP eCLIP30.72■■■□□ 2.51
CHMP4B-201ENST00000217402 DDX20Q9UHI6 824 aaKnown RBP30.72■■■□□ 2.51
CHMP4B-201ENST00000217402 PPP6R2O75170 966 aa30.71■■■□□ 2.51
CHMP4B-201ENST00000217402 FXR2P51116 673 aaKnown RBP eCLIP30.71■■■□□ 2.518e-8■□□□□ 8.3
CHMP4B-201ENST00000217402 SPIRE1Q08AE8 756 aa30.71■■■□□ 2.51
CHMP4B-201ENST00000217402 NCAPH2Q6IBW4 605 aa30.71■■■□□ 2.51
CHMP4B-201ENST00000217402 KRI1Q8N9T8 703 aaKnown RBP30.71■■■□□ 2.51
CHMP4B-201ENST00000217402 FERMT2Q96AC1 680 aa30.71■■■□□ 2.51
CHMP4B-201ENST00000217402 CLIC6Q96NY7 704 aa30.71■■■□□ 2.51
CHMP4B-201ENST00000217402 MCOLN1Q9GZU1 580 aa30.71■■■□□ 2.51
CHMP4B-201ENST00000217402 SRPRBQ9Y5M8 271 aaKnown RBP30.71■■■□□ 2.51
CHMP4B-201ENST00000217402 DUSP11O75319 330 aaKnown RBP30.7■■■□□ 2.51
CHMP4B-201ENST00000217402 KRT76Q01546 638 aa30.7■■■□□ 2.51
CHMP4B-201ENST00000217402 PPP2R5CQ13362 524 aa30.7■■■□□ 2.51
CHMP4B-201ENST00000217402 LAMC2Q13753 1193 aa30.7■■■□□ 2.51
CHMP4B-201ENST00000217402 HSDL1Q3SXM5 330 aa30.7■■■□□ 2.51
CHMP4B-201ENST00000217402 MORC2Q9Y6X9 1032 aaPredicted RBP30.7■■■□□ 2.51
CHMP4B-201ENST00000217402 NOP56O00567 594 aaKnown RBP30.69■■■□□ 2.5
CHMP4B-201ENST00000217402 CCL5P13501 91 aa30.69■■■□□ 2.5
CHMP4B-201ENST00000217402 AP5M1Q9H0R1 490 aa30.69■■■□□ 2.5
CHMP4B-201ENST00000217402 SAMM50Q9Y512 469 aa30.69■■■□□ 2.5
CHMP4B-201ENST00000217402 POTEFA5A3E0 1075 aa30.69■■■□□ 2.5
CHMP4B-201ENST00000217402 ACTR2P61160 394 aa30.69■■■□□ 2.5
CHMP4B-201ENST00000217402 TPRNQ4KMQ1 711 aa30.69■■■□□ 2.5
CHMP4B-201ENST00000217402 ZNF746Q6NUN9 644 aaPredicted RBP30.69■■■□□ 2.5
CHMP4B-201ENST00000217402 AFG1LQ8WV93 481 aa30.69■■■□□ 2.5
CHMP4B-201ENST00000217402 EMID1Q96A84 441 aaPredicted RBP30.69■■■□□ 2.5
CHMP4B-201ENST00000217402 ZNF333Q96JL9 665 aa30.69■■■□□ 2.5
CHMP4B-201ENST00000217402 CSRNP2Q9H175 543 aa30.69■■■□□ 2.5
CHMP4B-201ENST00000217402 PCDHA7Q9UN72 937 aa30.69■■■□□ 2.5
CHMP4B-201ENST00000217402 ELP1O95163 1332 aa30.68■■■□□ 2.5
CHMP4B-201ENST00000217402 EML1O00423 815 aa30.68■■■□□ 2.5
CHMP4B-201ENST00000217402 IRX5P78411 483 aaPredicted RBP30.68■■■□□ 2.5
CHMP4B-201ENST00000217402 B3GNT9Q6UX72 402 aa30.68■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms