RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 NLRC4Q9NPP4 1024 aa14.55□□□□□ -0.08
CTNS-201ENST00000046640 CWC15Q9P013 229 aaKnown RBP14.55□□□□□ -0.08
CTNS-201ENST00000046640 BRWD3Q6RI45 1802 aa14.54□□□□□ -0.08
CTNS-201ENST00000046640 A0A1W2PRG0 241 aa14.54□□□□□ -0.08
CTNS-201ENST00000046640 SLC20A2Q08357 652 aa14.54□□□□□ -0.08
CTNS-201ENST00000046640 TMEM119Q4V9L6 283 aa14.54□□□□□ -0.08
CTNS-201ENST00000046640 RRAGAQ7L523 313 aa14.54□□□□□ -0.08
CTNS-201ENST00000046640 ANKRD13CQ8N6S4 541 aa14.54□□□□□ -0.08
CTNS-201ENST00000046640 JAKMIP2Q96AA8 810 aa14.54□□□□□ -0.08
CTNS-201ENST00000046640 DNAJC19Q96DA6 116 aa14.54□□□□□ -0.08
CTNS-201ENST00000046640 ATF5Q9Y2D1 282 aaPredicted RBP14.54□□□□□ -0.08
CTNS-201ENST00000046640 PVALEFA0A1B0GWK0 134 aa14.54□□□□□ -0.08
CTNS-201ENST00000046640 PLA2G4BP0C869 781 aa14.54□□□□□ -0.08
CTNS-201ENST00000046640 ZBED6P86452 979 aa14.54□□□□□ -0.08
CTNS-201ENST00000046640 AMPD2Q01433 879 aa14.54□□□□□ -0.08
CTNS-201ENST00000046640 C2orf54Q08AI8 447 aa14.54□□□□□ -0.08
CTNS-201ENST00000046640 PABPC4Q13310 644 aaKnown RBP eCLIP14.54□□□□□ -0.08
CTNS-201ENST00000046640 CCDC42Q96M95 316 aa14.54□□□□□ -0.08
CTNS-201ENST00000046640 PDGFDQ9GZP0 370 aaPredicted RBP14.54□□□□□ -0.08
CTNS-201ENST00000046640 RRP15Q9Y3B9 282 aaKnown RBP14.54□□□□□ -0.08
CTNS-201ENST00000046640 SAR1BQ9Y6B6 198 aa14.54□□□□□ -0.08
CTNS-201ENST00000046640 LTBP1Q14766 1721 aa14.53□□□□□ -0.08
CTNS-201ENST00000046640 RAD17O75943 681 aa14.53□□□□□ -0.08
CTNS-201ENST00000046640 IPO7O95373 1038 aaKnown RBP14.53□□□□□ -0.08
CTNS-201ENST00000046640 ARHGAP4P98171 946 aa14.53□□□□□ -0.08
CTNS-201ENST00000046640 CCDC40Q4G0X9 1142 aa14.53□□□□□ -0.08
CTNS-201ENST00000046640 FAM26FQ5R3K3 315 aa14.53□□□□□ -0.08
CTNS-201ENST00000046640 MYOCDQ8IZQ8 938 aa14.53□□□□□ -0.08
CTNS-201ENST00000046640 TBC1D5Q92609 795 aa14.53□□□□□ -0.08
CTNS-201ENST00000046640 DHX36Q9H2U1 1008 aaKnown RBP14.53□□□□□ -0.08
CTNS-201ENST00000046640 ZNF263O14978 683 aa14.53□□□□□ -0.08
CTNS-201ENST00000046640 PPIP5K2O43314 1243 aa14.53□□□□□ -0.08
CTNS-201ENST00000046640 RNF40O75150 1001 aa14.53□□□□□ -0.08
CTNS-201ENST00000046640 ARID5AQ03989 594 aa14.53□□□□□ -0.08
CTNS-201ENST00000046640 GUF1Q8N442 669 aaKnown RBP14.53□□□□□ -0.08
CTNS-201ENST00000046640 MTMR8Q96EF0 704 aa14.53□□□□□ -0.08
CTNS-201ENST00000046640 EHD4Q9H223 541 aa14.53□□□□□ -0.08
CTNS-201ENST00000046640 BMP2KQ9NSY1 1161 aaPredicted RBP14.53□□□□□ -0.08
CTNS-201ENST00000046640 MYH7BA7E2Y1 1941 aa14.53□□□□□ -0.08
CTNS-201ENST00000046640 FAM86B1E9PN63 330 aa14.52□□□□□ -0.08
CTNS-201ENST00000046640 FAM86B2P0C5J1 330 aa14.52□□□□□ -0.08
CTNS-201ENST00000046640 MYBL2P10244 700 aa14.52□□□□□ -0.08
CTNS-201ENST00000046640 DNA2P51530 1060 aa14.52□□□□□ -0.08
CTNS-201ENST00000046640 MUM1L1Q5H9M0 696 aa14.52□□□□□ -0.08
CTNS-201ENST00000046640 PPP1R18Q6NYC8 613 aa14.52□□□□□ -0.08
CTNS-201ENST00000046640 CCDC84Q86UT8 332 aaPredicted RBP14.52□□□□□ -0.08
CTNS-201ENST00000046640 CDAN1Q8IWY9 1227 aa14.52□□□□□ -0.08
CTNS-201ENST00000046640 DEF6Q9H4E7 631 aa14.52□□□□□ -0.08
CTNS-201ENST00000046640 SMARCAL1Q9NZC9 954 aa14.52□□□□□ -0.08
CTNS-201ENST00000046640 ZBTB12Q9Y330 459 aaPredicted RBP14.52□□□□□ -0.08
CTNS-201ENST00000046640 LRRC53A6NM62 1247 aa14.52□□□□□ -0.09
CTNS-201ENST00000046640 CYLC1P35663 651 aaPredicted RBP14.52□□□□□ -0.09
CTNS-201ENST00000046640 ORC2Q13416 577 aaPredicted RBP14.52□□□□□ -0.09
CTNS-201ENST00000046640 LRRC55Q6ZSA7 311 aa14.52□□□□□ -0.09
CTNS-201ENST00000046640 MIGA2Q7L4E1 593 aa14.52□□□□□ -0.09
CTNS-201ENST00000046640 FBXO11Q86XK2 927 aa14.52□□□□□ -0.09
CTNS-201ENST00000046640 GOLGA6L1Q8N7Z2 621 aa14.52□□□□□ -0.09
CTNS-201ENST00000046640 NUP58Q9BVL2 599 aa14.52□□□□□ -0.09
CTNS-201ENST00000046640 AMNQ9BXJ7 453 aa14.52□□□□□ -0.09
CTNS-201ENST00000046640 GBP3Q9H0R5 595 aa14.52□□□□□ -0.09
CTNS-201ENST00000046640 HAUS4Q9H6D7 363 aa14.52□□□□□ -0.09
CTNS-201ENST00000046640 NYAP2Q9P242 653 aa14.52□□□□□ -0.09
CTNS-201ENST00000046640 ARHGAP20Q9P2F6 1191 aa14.52□□□□□ -0.09
CTNS-201ENST00000046640 MYH4Q9Y623 1939 aa14.52□□□□□ -0.09
CTNS-201ENST00000046640 FAM170AA1A519 330 aa14.52□□□□□ -0.09
CTNS-201ENST00000046640 SPDYE3A6NKU9 549 aa14.52□□□□□ -0.09
CTNS-201ENST00000046640 YDJCA8MPS7 323 aa14.52□□□□□ -0.09
CTNS-201ENST00000046640 CXCR5P32302 372 aa14.52□□□□□ -0.09
CTNS-201ENST00000046640 RBM26Q5T8P6 1007 aaKnown RBP14.52□□□□□ -0.09
CTNS-201ENST00000046640 CCDC174Q6PII3 467 aa14.52□□□□□ -0.09
CTNS-201ENST00000046640 TRAPPC11Q7Z392 1133 aa14.52□□□□□ -0.09
CTNS-201ENST00000046640 CATSPER3Q86XQ3 398 aa14.52□□□□□ -0.09
CTNS-201ENST00000046640 ACER1Q8TDN7 264 aa14.52□□□□□ -0.09
CTNS-201ENST00000046640 ERGIC2Q96RQ1 377 aa14.52□□□□□ -0.09
CTNS-201ENST00000046640 RASSF4Q9H2L5 321 aa14.52□□□□□ -0.09
CTNS-201ENST00000046640 SCN9AQ15858 1988 aa14.51□□□□□ -0.09
CTNS-201ENST00000046640 SFI1A8K8P3 1242 aa14.51□□□□□ -0.09
CTNS-201ENST00000046640 PDE2AO00408 941 aaPredicted RBP14.51□□□□□ -0.09
CTNS-201ENST00000046640 CHMP2AO43633 222 aa14.51□□□□□ -0.09
CTNS-201ENST00000046640 EIF4A3P38919 411 aaKnown RBP14.51□□□□□ -0.09
CTNS-201ENST00000046640 CASP5P51878 434 aa14.51□□□□□ -0.09
CTNS-201ENST00000046640 USP14P54578 494 aa14.51□□□□□ -0.09
CTNS-201ENST00000046640 KRT83P78385 493 aa14.51□□□□□ -0.09
CTNS-201ENST00000046640 MEA1Q16626 185 aa14.51□□□□□ -0.09
CTNS-201ENST00000046640 MAN2A1Q16706 1144 aa14.51□□□□□ -0.09
CTNS-201ENST00000046640 KIAA1755Q5JYT7 1200 aa14.51□□□□□ -0.09
CTNS-201ENST00000046640 TMEM179Q6ZVK1 233 aa14.51□□□□□ -0.09
CTNS-201ENST00000046640 CACNA2D4Q7Z3S7 1137 aa14.51□□□□□ -0.09
CTNS-201ENST00000046640 TSG101Q99816 390 aa14.51□□□□□ -0.09
CTNS-201ENST00000046640 IDI2Q9BXS1 227 aa14.51□□□□□ -0.09
CTNS-201ENST00000046640 MLXIPQ9HAP2 919 aa14.51□□□□□ -0.09
CTNS-201ENST00000046640 SIK3Q9Y2K2 1263 aa14.51□□□□□ -0.09
CTNS-201ENST00000046640 LRRC37AA6NMS7 1700 aa14.51□□□□□ -0.09
CTNS-201ENST00000046640 AKR1B10O60218 316 aa14.51□□□□□ -0.09
CTNS-201ENST00000046640 CFBP00751 764 aa14.51□□□□□ -0.09
CTNS-201ENST00000046640 BMP3P12645 472 aa14.51□□□□□ -0.09
CTNS-201ENST00000046640 ZNF76P36508 570 aa14.51□□□□□ -0.09
CTNS-201ENST00000046640 EZH2Q15910 746 aaKnown RBP14.51□□□□□ -0.09
CTNS-201ENST00000046640 TTC19Q6DKK2 380 aaPredicted RBP14.51□□□□□ -0.09
CTNS-201ENST00000046640 SRLQ86TD4 932 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms