RNA–Protein interactions for RNA: ENST00000013807.9

ERCC1-201, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 1,278 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-201ENST00000013807 MTCH2Q9Y6C9 303 aa18.32■□□□□ 0.52
ERCC1-201ENST00000013807 TCF20Q9UGU0 1960 aaKnown RBP18.31■□□□□ 0.52
ERCC1-201ENST00000013807 SLC27A2O14975 620 aa18.31■□□□□ 0.52
ERCC1-201ENST00000013807 CAND2O75155 1236 aa18.31■□□□□ 0.52
ERCC1-201ENST00000013807 LGALS2P05162 132 aa18.31■□□□□ 0.52
ERCC1-201ENST00000013807 MRPS5P82675 430 aaKnown RBP18.31■□□□□ 0.52
ERCC1-201ENST00000013807 ZNF200P98182 395 aaPredicted RBP18.31■□□□□ 0.52
ERCC1-201ENST00000013807 SGMS1Q86VZ5 419 aa18.31■□□□□ 0.52
ERCC1-201ENST00000013807 PPM1EQ8WY54 764 aa18.31■□□□□ 0.52
ERCC1-201ENST00000013807 ZFP91Q96JP5 570 aaPredicted RBP18.31■□□□□ 0.52
ERCC1-201ENST00000013807 TLL1O43897 1013 aa18.3■□□□□ 0.52
ERCC1-201ENST00000013807 ARHGEF15O94989 841 aa18.3■□□□□ 0.52
ERCC1-201ENST00000013807 GJB5O95377 273 aa18.3■□□□□ 0.52
ERCC1-201ENST00000013807 ADAM17P78536 824 aa18.3■□□□□ 0.52
ERCC1-201ENST00000013807 COL9A3Q14050 684 aaPredicted RBP18.3■□□□□ 0.52
ERCC1-201ENST00000013807 IKBKEQ14164 716 aa18.3■□□□□ 0.52
ERCC1-201ENST00000013807 CCDC85BQ15834 202 aaPredicted RBP18.3■□□□□ 0.52
ERCC1-201ENST00000013807 TCTN1Q2MV58 587 aa18.3■□□□□ 0.52
ERCC1-201ENST00000013807 USP17L6PQ6QN14 398 aa18.3■□□□□ 0.52
ERCC1-201ENST00000013807 TEX2Q8IWB9 1127 aa18.3■□□□□ 0.52
ERCC1-201ENST00000013807 GPR20Q99678 358 aa18.3■□□□□ 0.52
ERCC1-201ENST00000013807 MYL10Q9BUA6 226 aa18.3■□□□□ 0.52
ERCC1-201ENST00000013807 TSPYL2Q9H2G4 693 aaPredicted RBP18.3■□□□□ 0.52
ERCC1-201ENST00000013807 RNPEPQ9H4A4 650 aa18.3■□□□□ 0.52
ERCC1-201ENST00000013807 SEC63Q9UGP8 760 aaKnown RBP18.3■□□□□ 0.52
ERCC1-201ENST00000013807 COL4A4P53420 1690 aaPredicted RBP18.29■□□□□ 0.52
ERCC1-201ENST00000013807 C17orf102A2RUQ5 167 aa18.29■□□□□ 0.52
ERCC1-201ENST00000013807 EPOPA6NHQ4 379 aa18.29■□□□□ 0.52
ERCC1-201ENST00000013807 LGR5O75473 907 aa18.29■□□□□ 0.52
ERCC1-201ENST00000013807 BMP2KLQ5H9B9 411 aa18.29■□□□□ 0.52
ERCC1-201ENST00000013807 CREB3L3Q68CJ9 461 aa18.29■□□□□ 0.52
ERCC1-201ENST00000013807 CYFIP1Q7L576 1253 aa18.29■□□□□ 0.52
ERCC1-201ENST00000013807 FANCBQ8NB91 859 aa18.29■□□□□ 0.52
ERCC1-201ENST00000013807 GIMAP8Q8ND71 665 aaPredicted RBP18.29■□□□□ 0.52
ERCC1-201ENST00000013807 SMARCC2Q8TAQ2 1214 aa18.29■□□□□ 0.52
ERCC1-201ENST00000013807 CUL5Q93034 780 aa18.29■□□□□ 0.52
ERCC1-201ENST00000013807 RAD9AQ99638 391 aa18.29■□□□□ 0.52
ERCC1-201ENST00000013807 LMCD1Q9NZU5 365 aa18.29■□□□□ 0.52
ERCC1-201ENST00000013807 CCDC69A6NI79 296 aa18.28■□□□□ 0.52
ERCC1-201ENST00000013807 RSPH10B2B2RC85 870 aa18.28■□□□□ 0.52
ERCC1-201ENST00000013807 NOP56O00567 594 aaKnown RBP18.28■□□□□ 0.52
ERCC1-201ENST00000013807 LPXNO60711 386 aa18.28■□□□□ 0.52
ERCC1-201ENST00000013807 PLEKHA8P1O95397 391 aa18.28■□□□□ 0.52
ERCC1-201ENST00000013807 RSPH10BP0C881 870 aa18.28■□□□□ 0.52
ERCC1-201ENST00000013807 SMIM10L2AP0DMW4 78 aa18.28■□□□□ 0.52
ERCC1-201ENST00000013807 SMIM10L2BP0DMW5 78 aa18.28■□□□□ 0.52
ERCC1-201ENST00000013807 DEFB103AP81534 67 aa18.28■□□□□ 0.52
ERCC1-201ENST00000013807 TSGA10IPQ3SY00 556 aa18.28■□□□□ 0.52
ERCC1-201ENST00000013807 PLEKHG4Q58EX7 1191 aa18.28■□□□□ 0.52
ERCC1-201ENST00000013807 ATP6V0A1Q93050 837 aa18.28■□□□□ 0.52
ERCC1-201ENST00000013807 GPRASP2Q96D09 838 aa18.28■□□□□ 0.52
ERCC1-201ENST00000013807 PSTPIP2Q9H939 334 aa18.28■□□□□ 0.52
ERCC1-201ENST00000013807 RTEL1Q9NZ71 1219 aa18.28■□□□□ 0.52
ERCC1-201ENST00000013807 RFXAPO00287 272 aa18.27■□□□□ 0.52
ERCC1-201ENST00000013807 MAFGO15525 162 aa18.27■□□□□ 0.52
ERCC1-201ENST00000013807 TREHO43280 583 aa18.27■□□□□ 0.52
ERCC1-201ENST00000013807 GTPBP6O43824 516 aaPredicted RBP18.27■□□□□ 0.52
ERCC1-201ENST00000013807 GNAT1P11488 350 aa18.27■□□□□ 0.52
ERCC1-201ENST00000013807 NFXL1Q6ZNB6 911 aa18.27■□□□□ 0.52
ERCC1-201ENST00000013807 NLRX1Q86UT6 975 aa18.27■□□□□ 0.52
ERCC1-201ENST00000013807 PIBF1Q8WXW3 757 aa18.27■□□□□ 0.52
ERCC1-201ENST00000013807 CDHR1Q96JP9 859 aa18.27■□□□□ 0.52
ERCC1-201ENST00000013807 TNFRSF10AO00220 468 aa18.26■□□□□ 0.51
ERCC1-201ENST00000013807 SORBS3O60504 671 aa18.26■□□□□ 0.51
ERCC1-201ENST00000013807 BMP1P13497 986 aa18.26■□□□□ 0.51
ERCC1-201ENST00000013807 KCNA2P16389 499 aa18.26■□□□□ 0.51
ERCC1-201ENST00000013807 THPOP40225 353 aa18.26■□□□□ 0.51
ERCC1-201ENST00000013807 ERVK-21P61565 698 aa18.26■□□□□ 0.51
ERCC1-201ENST00000013807 TMTC3Q6ZXV5 915 aa18.26■□□□□ 0.51
ERCC1-201ENST00000013807 RPAINQ86UA6 219 aa18.26■□□□□ 0.51
ERCC1-201ENST00000013807 DBF4BQ8NFT6 615 aa18.26■□□□□ 0.51
ERCC1-201ENST00000013807 ARNTL2Q8WYA1 636 aa18.26■□□□□ 0.51
ERCC1-201ENST00000013807 CERS4Q9HA82 394 aa18.26■□□□□ 0.51
ERCC1-201ENST00000013807 SLC12A7Q9Y666 1083 aa18.26■□□□□ 0.51
ERCC1-201ENST00000013807 NLRC5Q86WI3 1866 aa18.26■□□□□ 0.51
ERCC1-201ENST00000013807 COL4A6Q14031 1691 aa18.25■□□□□ 0.51
ERCC1-201ENST00000013807 LCHNA4D1U4 455 aa18.25■□□□□ 0.51
ERCC1-201ENST00000013807 ITGB5P18084 799 aa18.25■□□□□ 0.51
ERCC1-201ENST00000013807 HTRA4P83105 476 aaPredicted RBP18.25■□□□□ 0.51
ERCC1-201ENST00000013807 EXOSC10Q01780 885 aaKnown RBP18.25■□□□□ 0.51
ERCC1-201ENST00000013807 GRB10Q13322 594 aa18.25■□□□□ 0.51
ERCC1-201ENST00000013807 AAK1Q2M2I8 961 aa18.25■□□□□ 0.51
ERCC1-201ENST00000013807 FAM26DQ5JW98 314 aa18.25■□□□□ 0.51
ERCC1-201ENST00000013807 CMTR1Q8N1G2 835 aaKnown RBP18.25■□□□□ 0.51
ERCC1-201ENST00000013807 ZBED2Q9BTP6 218 aa18.25■□□□□ 0.51
ERCC1-201ENST00000013807 ZNF215Q9UL58 517 aaPredicted RBP18.25■□□□□ 0.51
ERCC1-201ENST00000013807 COG5Q9UP83 839 aa18.25■□□□□ 0.51
ERCC1-201ENST00000013807 INSL6Q9Y581 213 aa18.25■□□□□ 0.51
ERCC1-201ENST00000013807 UBIAD1Q9Y5Z9 338 aa18.25■□□□□ 0.51
ERCC1-201ENST00000013807 LOXHD1Q8IVV2 1947 aa18.25■□□□□ 0.51
ERCC1-201ENST00000013807 NRCAMQ92823 1304 aa18.24■□□□□ 0.51
ERCC1-201ENST00000013807 RALGAPA2Q2PPJ7 1873 aa18.24■□□□□ 0.51
ERCC1-201ENST00000013807 TTC3P53804 2025 aa18.24■□□□□ 0.51
ERCC1-201ENST00000013807 LINC01553A4QN01 128 aa18.24■□□□□ 0.51
ERCC1-201ENST00000013807 ATP9AO75110 1047 aa18.24■□□□□ 0.51
ERCC1-201ENST00000013807 RNF20Q5VTR2 975 aa18.24■□□□□ 0.51
ERCC1-201ENST00000013807 TMCO2Q7Z6W1 182 aaPredicted RBP18.24■□□□□ 0.51
ERCC1-201ENST00000013807 SP7Q8TDD2 431 aaPredicted RBP18.24■□□□□ 0.51
ERCC1-201ENST00000013807 ANO2Q9NQ90 1003 aa18.24■□□□□ 0.51
ERCC1-201ENST00000013807 SETD4Q9NVD3 440 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms