RNA–Protein interactions for RNA: ENST00000006053.6

CX3CL1-201, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CX3CL1, Length 3,321 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-201ENST00000006053 GDF3Q9NR23 364 aa11.58□□□□□ -0.56
CX3CL1-201ENST00000006053 ADAMTS1Q9UHI8 967 aa11.58□□□□□ -0.56
CX3CL1-201ENST00000006053 TSKSQ9UJT2 592 aa11.58□□□□□ -0.56
CX3CL1-201ENST00000006053 PVALEFA0A1B0GWK0 134 aa11.57□□□□□ -0.56
CX3CL1-201ENST00000006053 SSU72P8A0A1W2PR75 194 aa11.57□□□□□ -0.56
CX3CL1-201ENST00000006053 SLC37A4O43826 429 aa11.57□□□□□ -0.56
CX3CL1-201ENST00000006053 TLR2O60603 784 aa11.57□□□□□ -0.56
CX3CL1-201ENST00000006053 CLSTN1O94985 981 aa11.57□□□□□ -0.56
CX3CL1-201ENST00000006053 NR1D1P20393 614 aa11.57□□□□□ -0.56
CX3CL1-201ENST00000006053 GSCP56915 257 aaPredicted RBP11.57□□□□□ -0.56
CX3CL1-201ENST00000006053 KIAA0753Q2KHM9 967 aa11.57□□□□□ -0.56
CX3CL1-201ENST00000006053 CEP85LQ5SZL2 805 aa11.57□□□□□ -0.56
CX3CL1-201ENST00000006053 KRT79Q5XKE5 535 aa11.57□□□□□ -0.56
CX3CL1-201ENST00000006053 IQCKQ8N0W5 287 aa11.57□□□□□ -0.56
CX3CL1-201ENST00000006053 COA7Q96BR5 231 aa11.57□□□□□ -0.56
CX3CL1-201ENST00000006053 MYO1FO00160 1098 aa11.57□□□□□ -0.56
CX3CL1-201ENST00000006053 RASA1P20936 1047 aa11.57□□□□□ -0.56
CX3CL1-201ENST00000006053 SPTY2D1Q68D10 685 aaPredicted RBP11.57□□□□□ -0.56
CX3CL1-201ENST00000006053 PTF1AQ7RTS3 328 aa11.57□□□□□ -0.56
CX3CL1-201ENST00000006053 MYOCDQ8IZQ8 938 aa11.57□□□□□ -0.56
CX3CL1-201ENST00000006053 FAM133AQ8N9E0 248 aa11.57□□□□□ -0.56
CX3CL1-201ENST00000006053 EYA3Q99504 573 aa11.57□□□□□ -0.56
CX3CL1-201ENST00000006053 LZTS2Q9BRK4 669 aa11.57□□□□□ -0.56
CX3CL1-201ENST00000006053 LUC7LQ9NQ29 371 aaKnown RBP11.57□□□□□ -0.56
CX3CL1-201ENST00000006053 COL4A3BPQ9Y5P4 624 aa11.57□□□□□ -0.56
CX3CL1-201ENST00000006053 CASZ1Q86V15 1759 aa11.57□□□□□ -0.56
CX3CL1-201ENST00000006053 SERPING1P05155 500 aa11.57□□□□□ -0.56
CX3CL1-201ENST00000006053 TNFRSF8P28908 595 aa11.57□□□□□ -0.56
CX3CL1-201ENST00000006053 CACNB1Q02641 598 aaPredicted RBP11.57□□□□□ -0.56
CX3CL1-201ENST00000006053 GRIK5Q16478 980 aa11.57□□□□□ -0.56
CX3CL1-201ENST00000006053 SLC51AQ86UW1 340 aa11.57□□□□□ -0.56
CX3CL1-201ENST00000006053 DNAAF5Q86Y56 855 aa11.57□□□□□ -0.56
CX3CL1-201ENST00000006053 SUGP1Q8IWZ8 645 aaKnown RBP11.57□□□□□ -0.56
CX3CL1-201ENST00000006053 RAD54LQ92698 747 aa11.57□□□□□ -0.56
CX3CL1-201ENST00000006053 TAF4BQ92750 862 aa11.57□□□□□ -0.56
CX3CL1-201ENST00000006053 NLRP3Q96P20 1036 aa11.57□□□□□ -0.56
CX3CL1-201ENST00000006053 GOLPH3Q9H4A6 298 aa11.57□□□□□ -0.56
CX3CL1-201ENST00000006053 STK17AQ9UEE5 414 aa11.57□□□□□ -0.56
CX3CL1-201ENST00000006053 FRMPD2Q68DX3 1309 aaPredicted RBP11.56□□□□□ -0.56
CX3CL1-201ENST00000006053 RAD51CO43502 376 aa11.56□□□□□ -0.56
CX3CL1-201ENST00000006053 SCP2P22307 547 aa11.56□□□□□ -0.56
CX3CL1-201ENST00000006053 EPS15P42566 896 aa11.56□□□□□ -0.56
CX3CL1-201ENST00000006053 TNNI2P48788 182 aa11.56□□□□□ -0.56
CX3CL1-201ENST00000006053 KLHL30Q0D2K2 578 aa11.56□□□□□ -0.56
CX3CL1-201ENST00000006053 COBLL1Q53SF7 1204 aa11.56□□□□□ -0.56
CX3CL1-201ENST00000006053 SPZ1Q9BXG8 430 aa11.56□□□□□ -0.56
CX3CL1-201ENST00000006053 ZHX3Q9H4I2 956 aa11.56□□□□□ -0.56
CX3CL1-201ENST00000006053 PPANQ9NQ55 473 aaKnown RBP11.56□□□□□ -0.56
CX3CL1-201ENST00000006053 CEP72Q9P209 647 aa11.56□□□□□ -0.56
CX3CL1-201ENST00000006053 PLAAQ9Y263 795 aa11.56□□□□□ -0.56
CX3CL1-201ENST00000006053 A0A087X0T9 212 aa11.56□□□□□ -0.56
CX3CL1-201ENST00000006053 A6NNZ2 444 aa11.56□□□□□ -0.56
CX3CL1-201ENST00000006053 KCNK3O14649 394 aa11.56□□□□□ -0.56
CX3CL1-201ENST00000006053 BAG3O95817 575 aa11.56□□□□□ -0.56
CX3CL1-201ENST00000006053 FAM228BP0C875 321 aa11.56□□□□□ -0.56
CX3CL1-201ENST00000006053 FKBP3Q00688 224 aaKnown RBP11.56□□□□□ -0.56
CX3CL1-201ENST00000006053 TUBB8Q3ZCM7 444 aa11.56□□□□□ -0.56
CX3CL1-201ENST00000006053 NAA35Q5VZE5 725 aa11.56□□□□□ -0.56
CX3CL1-201ENST00000006053 KDM7AQ6ZMT4 941 aa11.56□□□□□ -0.56
CX3CL1-201ENST00000006053 PIK3R5Q8WYR1 880 aa11.56□□□□□ -0.56
CX3CL1-201ENST00000006053 RNF14Q9UBS8 474 aa11.56□□□□□ -0.56
CX3CL1-201ENST00000006053 E7EVH7 732 aa11.55□□□□□ -0.56
CX3CL1-201ENST00000006053 NOL4O94818 638 aa11.55□□□□□ -0.56
CX3CL1-201ENST00000006053 NAB2Q15742 525 aa11.55□□□□□ -0.56
CX3CL1-201ENST00000006053 TBC1D9BQ66K14 1250 aa11.55□□□□□ -0.56
CX3CL1-201ENST00000006053 KCNV1Q6PIU1 500 aa11.55□□□□□ -0.56
CX3CL1-201ENST00000006053 OR2W6PQ8NHA6 318 aa11.55□□□□□ -0.56
CX3CL1-201ENST00000006053 RAB34Q9BZG1 259 aa11.55□□□□□ -0.56
CX3CL1-201ENST00000006053 ANKRD2Q9GZV1 360 aa11.55□□□□□ -0.56
CX3CL1-201ENST00000006053 EPN3Q9H201 632 aa11.55□□□□□ -0.56
CX3CL1-201ENST00000006053 ATP6V0A2Q9Y487 856 aa11.55□□□□□ -0.56
CX3CL1-201ENST00000006053 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.55□□□□□ -0.56
CX3CL1-201ENST00000006053 GOLGA6L10A6NI86 522 aa11.55□□□□□ -0.56
CX3CL1-201ENST00000006053 USP17L5A8MUK1 530 aa11.55□□□□□ -0.56
CX3CL1-201ENST00000006053 PPP1R12AO14974 1030 aaPredicted RBP11.55□□□□□ -0.56
CX3CL1-201ENST00000006053 MEFVO15553 781 aaPredicted RBP11.55□□□□□ -0.56
CX3CL1-201ENST00000006053 PPP1R37O75864 691 aa11.55□□□□□ -0.56
CX3CL1-201ENST00000006053 COASYQ13057 564 aa11.55□□□□□ -0.56
CX3CL1-201ENST00000006053 ZNF473Q8WTR7 871 aaKnown RBP11.55□□□□□ -0.56
CX3CL1-201ENST00000006053 GPR101Q96P66 508 aaPredicted RBP11.55□□□□□ -0.56
CX3CL1-201ENST00000006053 MTMR9Q96QG7 549 aa11.55□□□□□ -0.56
CX3CL1-201ENST00000006053 SLC24A3Q9HC58 644 aa11.55□□□□□ -0.56
CX3CL1-201ENST00000006053 RIC8AQ9NPQ8 531 aa11.55□□□□□ -0.56
CX3CL1-201ENST00000006053 ANKIB1Q9P2G1 1089 aa11.55□□□□□ -0.56
CX3CL1-201ENST00000006053 CALRP27797 417 aaKnown RBP11.55□□□□□ -0.56
CX3CL1-201ENST00000006053 CDK8P49336 464 aa11.55□□□□□ -0.56
CX3CL1-201ENST00000006053 TNNC1P63316 161 aa11.55□□□□□ -0.56
CX3CL1-201ENST00000006053 HDLBPQ00341 1268 aaKnown RBP11.55□□□□□ -0.56
CX3CL1-201ENST00000006053 ECM1Q16610 540 aa11.55□□□□□ -0.56
CX3CL1-201ENST00000006053 FAM26FQ5R3K3 315 aa11.55□□□□□ -0.56
CX3CL1-201ENST00000006053 DDX42Q86XP3 938 aaKnown RBP eCLIP11.55□□□□□ -0.56
CX3CL1-201ENST00000006053 ATP6V1G3Q96LB4 118 aa11.55□□□□□ -0.56
CX3CL1-201ENST00000006053 FGFBP2Q9BYJ0 223 aa11.55□□□□□ -0.56
CX3CL1-201ENST00000006053 PANK4Q9NVE7 773 aa11.55□□□□□ -0.56
CX3CL1-201ENST00000006053 ABCB11O95342 1321 aa11.55□□□□□ -0.56
CX3CL1-201ENST00000006053 CEP104O60308 925 aa11.54□□□□□ -0.56
CX3CL1-201ENST00000006053 USP8P40818 1118 aa11.54□□□□□ -0.56
CX3CL1-201ENST00000006053 EIF6P56537 245 aaKnown RBP11.54□□□□□ -0.56
CX3CL1-201ENST00000006053 SARNPP82979 210 aaKnown RBP11.54□□□□□ -0.56
CX3CL1-201ENST00000006053 IFT88Q13099 833 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms