RNA–Protein interactions for RNA: ENSMUST00000115659.5

Pcdha9-201, Transcript of Protocadherin alpha-9, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdha9, Length 5,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9-201ENSMUST00000115659 Arid5bQ8BM75 1188 aaKnown RBP16.77■□□□□ 0.28
Pcdha9-201ENSMUST00000115659 Syngap1F6SEU4 1340 aa16.77■□□□□ 0.28
Pcdha9-201ENSMUST00000115659 Aoc3O70423 765 aa16.77■□□□□ 0.28
Pcdha9-201ENSMUST00000115659 Gucy2cQ3UWA6 1072 aa16.77■□□□□ 0.28
Pcdha9-201ENSMUST00000115659 HdlbpQ8VDJ3 1268 aaKnown RBP16.77■□□□□ 0.28
Pcdha9-201ENSMUST00000115659 Pfkfb3A7UAK5 555 aa16.77■□□□□ 0.28
Pcdha9-201ENSMUST00000115659 Trim5E9PV98 497 aa16.77■□□□□ 0.28
Pcdha9-201ENSMUST00000115659 GssP51855 474 aa16.77■□□□□ 0.28
Pcdha9-201ENSMUST00000115659 Slc9a1Q61165 820 aa16.77■□□□□ 0.28
Pcdha9-201ENSMUST00000115659 Dhx58Q99J87 678 aa16.77■□□□□ 0.28
Pcdha9-201ENSMUST00000115659 Kdm8Q9CXT6 414 aa16.77■□□□□ 0.28
Pcdha9-201ENSMUST00000115659 Exoc4O35382 975 aa16.77■□□□□ 0.27
Pcdha9-201ENSMUST00000115659 Vti1aO89116 217 aa16.77■□□□□ 0.27
Pcdha9-201ENSMUST00000115659 Slc3a2P10852 526 aaKnown RBP16.77■□□□□ 0.27
Pcdha9-201ENSMUST00000115659 Casp2P29594 452 aa16.77■□□□□ 0.27
Pcdha9-201ENSMUST00000115659 Slc7a1Q09143 622 aa16.77■□□□□ 0.27
Pcdha9-201ENSMUST00000115659 Ankrd13aQ80UP5 588 aa16.77■□□□□ 0.27
Pcdha9-201ENSMUST00000115659 Tmtc4Q8BG19 741 aa16.77■□□□□ 0.27
Pcdha9-201ENSMUST00000115659 MlxiplQ99MZ3 864 aa16.77■□□□□ 0.27
Pcdha9-201ENSMUST00000115659 Nsmce1Q9D720 266 aa16.77■□□□□ 0.27
Pcdha9-201ENSMUST00000115659 4933406M09RikG3XA12 479 aa16.77■□□□□ 0.27
Pcdha9-201ENSMUST00000115659 Per2O54943 1257 aa16.77■□□□□ 0.27
Pcdha9-201ENSMUST00000115659 Arid3aQ62431 601 aa16.77■□□□□ 0.27
Pcdha9-201ENSMUST00000115659 Dtnbp1Q91WZ8 352 aa16.77■□□□□ 0.27
Pcdha9-201ENSMUST00000115659 Simc1E9Q6E9 1354 aa16.77■□□□□ 0.27
Pcdha9-201ENSMUST00000115659 Cep152A2AUM9 1736 aaKnown RBP16.76■□□□□ 0.27
Pcdha9-201ENSMUST00000115659 Gimd1E9PW74 217 aa16.76■□□□□ 0.27
Pcdha9-201ENSMUST00000115659 Vmn2r79E9Q067 851 aa16.76■□□□□ 0.27
Pcdha9-201ENSMUST00000115659 Wfs1P56695 890 aa16.76■□□□□ 0.27
Pcdha9-201ENSMUST00000115659 Hspa8P63017 646 aaKnown RBP16.76■□□□□ 0.27
Pcdha9-201ENSMUST00000115659 Palb2Q3U0P1 1104 aa16.76■□□□□ 0.27
Pcdha9-201ENSMUST00000115659 Cog7Q3UM29 770 aa16.76■□□□□ 0.27
Pcdha9-201ENSMUST00000115659 Krt40Q6IFX3 439 aa16.76■□□□□ 0.27
Pcdha9-201ENSMUST00000115659 Cacnb1Q8R3Z5 597 aa16.76■□□□□ 0.27
Pcdha9-201ENSMUST00000115659 Styxl1Q9DAR2 321 aa16.76■□□□□ 0.27
Pcdha9-201ENSMUST00000115659 Eddm13E9Q7F5 164 aa16.76■□□□□ 0.27
Pcdha9-201ENSMUST00000115659 Clcn6O35454 870 aa16.76■□□□□ 0.27
Pcdha9-201ENSMUST00000115659 Sesn2P58043 480 aa16.76■□□□□ 0.27
Pcdha9-201ENSMUST00000115659 Stx1bP61264 288 aa16.76■□□□□ 0.27
Pcdha9-201ENSMUST00000115659 Gm3414Q3TNU4 584 aa16.76■□□□□ 0.27
Pcdha9-201ENSMUST00000115659 Ddx39aQ8VDW0 427 aaKnown RBP16.76■□□□□ 0.27
Pcdha9-201ENSMUST00000115659 Apol7bB1AQP7 369 aa16.76■□□□□ 0.27
Pcdha9-201ENSMUST00000115659 Agap2Q3UHD9 1186 aa16.76■□□□□ 0.27
Pcdha9-201ENSMUST00000115659 Mapk6Q61532 720 aa16.76■□□□□ 0.27
Pcdha9-201ENSMUST00000115659 Atp5c1Q91VR2 298 aaKnown RBP16.76■□□□□ 0.27
Pcdha9-201ENSMUST00000115659 Dbndd2Q9CRD4 158 aa16.76■□□□□ 0.27
Pcdha9-201ENSMUST00000115659 Cyth1Q9QX11 398 aa16.76■□□□□ 0.27
Pcdha9-201ENSMUST00000115659 Ccnyl1D3YUJ3 367 aa16.76■□□□□ 0.27
Pcdha9-201ENSMUST00000115659 Zfp408H7BX78 710 aa16.76■□□□□ 0.27
Pcdha9-201ENSMUST00000115659 Pcdhb14Q6PB90 796 aa16.76■□□□□ 0.27
Pcdha9-201ENSMUST00000115659 Lsm14bQ8CGC4 385 aaKnown RBP16.76■□□□□ 0.27
Pcdha9-201ENSMUST00000115659 Sytl1Q99N80 567 aa16.76■□□□□ 0.27
Pcdha9-201ENSMUST00000115659 Cfap65Q3V0B4 1847 aa16.75■□□□□ 0.27
Pcdha9-201ENSMUST00000115659 Prss51A0A286YDY8 319 aa16.75■□□□□ 0.27
Pcdha9-201ENSMUST00000115659 Nr1i3O35627 358 aa16.75■□□□□ 0.27
Pcdha9-201ENSMUST00000115659 Nlrp4cQ3TKR3 982 aa16.75■□□□□ 0.27
Pcdha9-201ENSMUST00000115659 Sfi1Q3UZY0 1216 aaKnown RBP16.75■□□□□ 0.27
Pcdha9-201ENSMUST00000115659 Pdik1lQ8QZR7 341 aa16.75■□□□□ 0.27
Pcdha9-201ENSMUST00000115659 EpgnQ924X1 152 aa16.75■□□□□ 0.27
Pcdha9-201ENSMUST00000115659 Mtmr2Q9Z2D1 643 aa16.75■□□□□ 0.27
Pcdha9-201ENSMUST00000115659 Stmn1P54227 149 aaKnown RBP16.75■□□□□ 0.27
Pcdha9-201ENSMUST00000115659 Mettl17Q3U2U7 461 aa16.75■□□□□ 0.27
Pcdha9-201ENSMUST00000115659 Spata32Q8C5V0 334 aa16.75■□□□□ 0.27
Pcdha9-201ENSMUST00000115659 Rrp1bQ91YK2 724 aaKnown RBP16.75■□□□□ 0.27
Pcdha9-201ENSMUST00000115659 Rbm6S4R1W5 1118 aaKnown RBP16.75■□□□□ 0.27
Pcdha9-201ENSMUST00000115659 Gm11985A0A1B0GS61 206 aa16.75■□□□□ 0.27
Pcdha9-201ENSMUST00000115659 Akap5D3YVF0 745 aa16.75■□□□□ 0.27
Pcdha9-201ENSMUST00000115659 Taf1bP97358 586 aa16.75■□□□□ 0.27
Pcdha9-201ENSMUST00000115659 PapolaQ61183 739 aa16.75■□□□□ 0.27
Pcdha9-201ENSMUST00000115659 Fxr1Q61584 677 aaKnown RBP16.75■□□□□ 0.27
Pcdha9-201ENSMUST00000115659 Eif4enif1Q9EST3 983 aaKnown RBP16.75■□□□□ 0.27
Pcdha9-201ENSMUST00000115659 Cog1Q9Z160 980 aa16.75■□□□□ 0.27
Pcdha9-201ENSMUST00000115659 Gm6588E9Q3K0 461 aa16.75■□□□□ 0.27
Pcdha9-201ENSMUST00000115659 Zdhhc9P59268 364 aa16.75■□□□□ 0.27
Pcdha9-201ENSMUST00000115659 Mphosph8Q3TYA6 858 aaKnown RBP16.75■□□□□ 0.27
Pcdha9-201ENSMUST00000115659 Miga1Q4QQM5 600 aa16.75■□□□□ 0.27
Pcdha9-201ENSMUST00000115659 Pak4Q8BTW9 593 aa16.75■□□□□ 0.27
Pcdha9-201ENSMUST00000115659 Atg16l1Q8C0J2 607 aa16.75■□□□□ 0.27
Pcdha9-201ENSMUST00000115659 Q8CEZ4 452 aa16.75■□□□□ 0.27
Pcdha9-201ENSMUST00000115659 Cdc26Q99JP4 85 aa16.75■□□□□ 0.27
Pcdha9-201ENSMUST00000115659 Snx1Q9WV80 522 aa16.75■□□□□ 0.27
Pcdha9-201ENSMUST00000115659 Ap1m1P35585 423 aa16.74■□□□□ 0.27
Pcdha9-201ENSMUST00000115659 Jade1Q6ZPI0 834 aaKnown RBP16.74■□□□□ 0.27
Pcdha9-201ENSMUST00000115659 Catsper1Q91ZR5 686 aa16.74■□□□□ 0.27
Pcdha9-201ENSMUST00000115659 Cyth3O08967 399 aa16.74■□□□□ 0.27
Pcdha9-201ENSMUST00000115659 Arl4aP61213 200 aa16.74■□□□□ 0.27
Pcdha9-201ENSMUST00000115659 Meis1Q60954 390 aa16.74■□□□□ 0.27
Pcdha9-201ENSMUST00000115659 Cdk8Q8R3L8 464 aa16.74■□□□□ 0.27
Pcdha9-201ENSMUST00000115659 Myo1cQ9WTI7 1063 aa16.74■□□□□ 0.27
Pcdha9-201ENSMUST00000115659 Bnip3lQ9Z2F7 218 aa16.74■□□□□ 0.27
Pcdha9-201ENSMUST00000115659 Cep85lA0A1W2P884 806 aa16.74■□□□□ 0.27
Pcdha9-201ENSMUST00000115659 Prmt9Q3U3W5 846 aa16.74■□□□□ 0.27
Pcdha9-201ENSMUST00000115659 Serpinb3dQ6UKZ0 387 aa16.74■□□□□ 0.27
Pcdha9-201ENSMUST00000115659 Znf467Q8JZL0 594 aa16.74■□□□□ 0.27
Pcdha9-201ENSMUST00000115659 Magi2Q9WVQ1 1275 aa16.74■□□□□ 0.27
Pcdha9-201ENSMUST00000115659 CemipQ8BI06 1361 aa16.74■□□□□ 0.27
Pcdha9-201ENSMUST00000115659 Prkg1P0C605 671 aa16.74■□□□□ 0.27
Pcdha9-201ENSMUST00000115659 Nrbf2Q8VCQ3 287 aa16.74■□□□□ 0.27
Pcdha9-201ENSMUST00000115659 Tmco4Q91WU4 631 aa16.74■□□□□ 0.27
Pcdha9-201ENSMUST00000115659 BaatQ91X34 420 aa16.74■□□□□ 0.27
Retrieved 100 of 22,080 RNA–protein pairs in 26 ms