RNA–Protein interactions for RNA: ENSMUST00000113706.9

Trim39-203, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-203ENSMUST00000113706 Tnfaip8l3Q3TBL6 204 aa17.6■□□□□ 0.41
Trim39-203ENSMUST00000113706 Q3UJP5 209 aa17.6■□□□□ 0.41
Trim39-203ENSMUST00000113706 Krt14Q61781 484 aa17.6■□□□□ 0.41
Trim39-203ENSMUST00000113706 Tmc3Q7TQ69 1130 aa17.6■□□□□ 0.41
Trim39-203ENSMUST00000113706 Glis2Q8VDL9 521 aa17.6■□□□□ 0.41
Trim39-203ENSMUST00000113706 Tnip1Q9WUU8 647 aa17.6■□□□□ 0.41
Trim39-203ENSMUST00000113706 Arhgap6O54834 987 aa17.59■□□□□ 0.41
Trim39-203ENSMUST00000113706 AurkbO70126 345 aa17.59■□□□□ 0.41
Trim39-203ENSMUST00000113706 Prl2c2P04095 224 aa17.59■□□□□ 0.41
Trim39-203ENSMUST00000113706 Akr1b1P45376 316 aa17.59■□□□□ 0.41
Trim39-203ENSMUST00000113706 Uri1Q3TLD5 531 aa17.59■□□□□ 0.41
Trim39-203ENSMUST00000113706 Wdr70Q3TWF6 657 aa17.59■□□□□ 0.41
Trim39-203ENSMUST00000113706 PccaQ91ZA3 724 aa17.59■□□□□ 0.41
Trim39-203ENSMUST00000113706 Apol10bG3X9K7 334 aa17.59■□□□□ 0.41
Trim39-203ENSMUST00000113706 YdjcQ14BV6 310 aa17.59■□□□□ 0.41
Trim39-203ENSMUST00000113706 Ppp2r5cQ60996 524 aa17.59■□□□□ 0.41
Trim39-203ENSMUST00000113706 Znf532Q6NXK2 1036 aa17.59■□□□□ 0.41
Trim39-203ENSMUST00000113706 Herc4Q6PAV2 1057 aa17.59■□□□□ 0.41
Trim39-203ENSMUST00000113706 Ddx41Q91VN6 622 aaKnown RBP17.59■□□□□ 0.41
Trim39-203ENSMUST00000113706 Uap1Q91YN5 522 aa17.59■□□□□ 0.41
Trim39-203ENSMUST00000113706 2310002L09RikQ9D7L5 217 aa17.59■□□□□ 0.41
Trim39-203ENSMUST00000113706 Usp14Q9JMA1 493 aaKnown RBP17.59■□□□□ 0.41
Trim39-203ENSMUST00000113706 Fem1bQ9Z2G0 627 aa17.59■□□□□ 0.41
Trim39-203ENSMUST00000113706 Kmt2eQ3UG20 1868 aa17.59■□□□□ 0.41
Trim39-203ENSMUST00000113706 Gm4985A2ALC6 410 aa17.59■□□□□ 0.41
Trim39-203ENSMUST00000113706 Spocd1B1ASB6 936 aa17.59■□□□□ 0.41
Trim39-203ENSMUST00000113706 Barx2O08686 283 aa17.59■□□□□ 0.41
Trim39-203ENSMUST00000113706 PtpraP18052 829 aa17.59■□□□□ 0.41
Trim39-203ENSMUST00000113706 Gas7Q60780 421 aa17.59■□□□□ 0.41
Trim39-203ENSMUST00000113706 BcrQ6PAJ1 1270 aa17.59■□□□□ 0.41
Trim39-203ENSMUST00000113706 Tmem132dQ76HP3 1097 aa17.59■□□□□ 0.41
Trim39-203ENSMUST00000113706 Iqcb1Q8BP00 598 aa17.59■□□□□ 0.41
Trim39-203ENSMUST00000113706 Csgalnact2Q8C1F4 542 aa17.59■□□□□ 0.41
Trim39-203ENSMUST00000113706 Ccdc14Q8K2J4 934 aa17.59■□□□□ 0.41
Trim39-203ENSMUST00000113706 Apopt1Q9CQW7 192 aa17.59■□□□□ 0.41
Trim39-203ENSMUST00000113706 Gm10378F6XQQ1 160 aa17.58■□□□□ 0.41
Trim39-203ENSMUST00000113706 Chrna9G3X8Z7 479 aa17.58■□□□□ 0.41
Trim39-203ENSMUST00000113706 Hmgb1P63158 215 aaKnown RBP17.58■□□□□ 0.41
Trim39-203ENSMUST00000113706 Rasip1Q3U0S6 961 aa17.58■□□□□ 0.41
Trim39-203ENSMUST00000113706 Gprin1Q3UNH4 932 aa17.58■□□□□ 0.41
Trim39-203ENSMUST00000113706 Sv2cQ69ZS6 727 aa17.58■□□□□ 0.41
Trim39-203ENSMUST00000113706 Ncoa7Q6DFV7 943 aa17.58■□□□□ 0.41
Trim39-203ENSMUST00000113706 Sez6lQ6P1D5 963 aa17.58■□□□□ 0.41
Trim39-203ENSMUST00000113706 Slc25a38Q91XD8 326 aa17.58■□□□□ 0.41
Trim39-203ENSMUST00000113706 Rnaseh2aQ9CWY8 301 aa17.58■□□□□ 0.41
Trim39-203ENSMUST00000113706 Cntnap5cQ0V8T7 1305 aa17.58■□□□□ 0.4
Trim39-203ENSMUST00000113706 Mmp10O55123 476 aa17.58■□□□□ 0.4
Trim39-203ENSMUST00000113706 Map4k1P70218 827 aa17.58■□□□□ 0.4
Trim39-203ENSMUST00000113706 Krt86P97861 486 aa17.58■□□□□ 0.4
Trim39-203ENSMUST00000113706 Spata21Q8BHW6 681 aa17.58■□□□□ 0.4
Trim39-203ENSMUST00000113706 Ccdc12Q8R344 166 aaKnown RBP17.58■□□□□ 0.4
Trim39-203ENSMUST00000113706 SetQ9EQU5 289 aaKnown RBP17.58■□□□□ 0.4
Trim39-203ENSMUST00000113706 Tex21Q9R0U9 575 aa17.58■□□□□ 0.4
Trim39-203ENSMUST00000113706 Oip5A2AQ14 241 aa17.57■□□□□ 0.4
Trim39-203ENSMUST00000113706 Vmn2r79E9Q067 851 aa17.57■□□□□ 0.4
Trim39-203ENSMUST00000113706 Cc2d1bQ8BRN9 848 aa17.57■□□□□ 0.4
Trim39-203ENSMUST00000113706 Trim47Q8C0E3 641 aa17.57■□□□□ 0.4
Trim39-203ENSMUST00000113706 Ears2Q9CXJ1 523 aa17.57■□□□□ 0.4
Trim39-203ENSMUST00000113706 Serpinb3bQ9D1Q5 387 aa17.57■□□□□ 0.4
Trim39-203ENSMUST00000113706 Dnajc7Q9QYI3 494 aa17.57■□□□□ 0.4
Trim39-203ENSMUST00000113706 Samd1D3YXK1 519 aa17.57■□□□□ 0.4
Trim39-203ENSMUST00000113706 Pip4k2aO70172 405 aa17.57■□□□□ 0.4
Trim39-203ENSMUST00000113706 Dnm2P39054 870 aaKnown RBP17.57■□□□□ 0.4
Trim39-203ENSMUST00000113706 Tmem35bQ3U0Y2 150 aa17.57■□□□□ 0.4
Trim39-203ENSMUST00000113706 PicalmQ7M6Y3 660 aaKnown RBP17.57■□□□□ 0.4
Trim39-203ENSMUST00000113706 Cracr2bQ80ZJ8 394 aa17.57■□□□□ 0.4
Trim39-203ENSMUST00000113706 CutaQ9CQ89 177 aa17.57■□□□□ 0.4
Trim39-203ENSMUST00000113706 Megf6Q80V70 1572 aa17.57■□□□□ 0.4
Trim39-203ENSMUST00000113706 Cnbd1B1AWM0 430 aa17.57■□□□□ 0.4
Trim39-203ENSMUST00000113706 Ccdc78D3Z5T1 437 aa17.57■□□□□ 0.4
Trim39-203ENSMUST00000113706 Itgb5O70309 798 aa17.57■□□□□ 0.4
Trim39-203ENSMUST00000113706 Naa35Q6PHQ8 725 aa17.57■□□□□ 0.4
Trim39-203ENSMUST00000113706 Mindy1Q76LS9 468 aa17.57■□□□□ 0.4
Trim39-203ENSMUST00000113706 Epn1Q80VP1 575 aa17.57■□□□□ 0.4
Trim39-203ENSMUST00000113706 Siglec10Q80ZE3 688 aa17.57■□□□□ 0.4
Trim39-203ENSMUST00000113706 Slc9b1Q8C0X2 565 aa17.57■□□□□ 0.4
Trim39-203ENSMUST00000113706 Nemp2Q8CB65 421 aa17.57■□□□□ 0.4
Trim39-203ENSMUST00000113706 Ddx20Q9JJY4 825 aaKnown RBP17.57■□□□□ 0.4
Trim39-203ENSMUST00000113706 Prkg1P0C605 671 aa17.56■□□□□ 0.4
Trim39-203ENSMUST00000113706 Rps6P62754 249 aaKnown RBP17.56■□□□□ 0.4
Trim39-203ENSMUST00000113706 Ubxn2bQ0KL01 331 aa17.56■□□□□ 0.4
Trim39-203ENSMUST00000113706 Zfp781Q0P5U5 243 aa17.56■□□□□ 0.4
Trim39-203ENSMUST00000113706 Tsg101Q61187 391 aa17.56■□□□□ 0.4
Trim39-203ENSMUST00000113706 Tfe3Q64092 572 aaKnown RBP17.56■□□□□ 0.4
Trim39-203ENSMUST00000113706 Trak2Q6P9N8 913 aa17.56■□□□□ 0.4
Trim39-203ENSMUST00000113706 D130040H23RikQ8BII3 405 aa17.56■□□□□ 0.4
Trim39-203ENSMUST00000113706 MtrrQ8C1A3 696 aa17.56■□□□□ 0.4
Trim39-203ENSMUST00000113706 Grin3bQ91ZU9 1003 aa17.56■□□□□ 0.4
Trim39-203ENSMUST00000113706 Fam217aQ9D9W6 419 aa17.56■□□□□ 0.4
Trim39-203ENSMUST00000113706 Phtf1Q9QZ09 761 aa17.56■□□□□ 0.4
Trim39-203ENSMUST00000113706 Eya4Q9Z191 616 aa17.56■□□□□ 0.4
Trim39-203ENSMUST00000113706 Zkscan5Q9Z1D8 819 aa17.56■□□□□ 0.4
Trim39-203ENSMUST00000113706 AgtP11859 477 aa17.56■□□□□ 0.4
Trim39-203ENSMUST00000113706 Pbxip1Q3TVI8 727 aa17.56■□□□□ 0.4
Trim39-203ENSMUST00000113706 Drd5Q8BLD9 478 aa17.56■□□□□ 0.4
Trim39-203ENSMUST00000113706 Tbc1d10cQ8C9V1 444 aa17.56■□□□□ 0.4
Trim39-203ENSMUST00000113706 DaglbQ91WC9 669 aa17.56■□□□□ 0.4
Trim39-203ENSMUST00000113706 Tmem39aQ9CYC3 486 aa17.56■□□□□ 0.4
Trim39-203ENSMUST00000113706 Trappc11B2RXC1 1133 aa17.55■□□□□ 0.4
Trim39-203ENSMUST00000113706 Znf618Q80YY7 953 aaKnown RBP17.55■□□□□ 0.4
Retrieved 100 of 22,080 RNA–protein pairs in 38.6 ms