RNA–Protein interactions for RNA: ENSMUST00000053317.11

Bdnf-201, Transcript of Brain-derived neurotrophic factor, mousemouse

TSL 1 (best) BASIC

Gene Bdnf, Length 4,266 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-201ENSMUST00000053317 Chd5A2A8L1 1946 aa7.67□□□□□ -1.18
Bdnf-201ENSMUST00000053317 Gm43951A0A0N4SUT6 962 aa7.67□□□□□ -1.18
Bdnf-201ENSMUST00000053317 Akap17bA2A3V1 959 aa7.67□□□□□ -1.18
Bdnf-201ENSMUST00000053317 Apol7aB2RT54 418 aa7.67□□□□□ -1.18
Bdnf-201ENSMUST00000053317 Otud7bB2RUR8 840 aa7.67□□□□□ -1.18
Bdnf-201ENSMUST00000053317 Pate3B3GLJ3 98 aa7.67□□□□□ -1.18
Bdnf-201ENSMUST00000053317 Zfp213E9QAW0 468 aa7.67□□□□□ -1.18
Bdnf-201ENSMUST00000053317 Gm10436L7N1Y3 520 aa7.67□□□□□ -1.18
Bdnf-201ENSMUST00000053317 Rgs9O54828 675 aa7.67□□□□□ -1.18
Bdnf-201ENSMUST00000053317 LtkP08923 888 aa7.67□□□□□ -1.18
Bdnf-201ENSMUST00000053317 Tal1P22091 329 aa7.67□□□□□ -1.18
Bdnf-201ENSMUST00000053317 Hvcn1Q3U2S8 269 aa7.67□□□□□ -1.18
Bdnf-201ENSMUST00000053317 Fscn1Q61553 493 aa7.67□□□□□ -1.18
Bdnf-201ENSMUST00000053317 Cep120Q7TSG1 988 aa7.67□□□□□ -1.18
Bdnf-201ENSMUST00000053317 Calhm6Q8C9E8 313 aa7.67□□□□□ -1.18
Bdnf-201ENSMUST00000053317 Crlf2Q8CII9 359 aa7.67□□□□□ -1.18
Bdnf-201ENSMUST00000053317 Tmem60Q8K174 133 aa7.67□□□□□ -1.18
Bdnf-201ENSMUST00000053317 Xrn2Q9DBR1 951 aaKnown RBP7.67□□□□□ -1.18
Bdnf-201ENSMUST00000053317 Scn11aQ9R053 1765 aa7.67□□□□□ -1.18
Bdnf-201ENSMUST00000053317 Ecm29Q6PDI5 1840 aa7.67□□□□□ -1.18
Bdnf-201ENSMUST00000053317 Rexo5D3YW29 759 aa7.66□□□□□ -1.18
Bdnf-201ENSMUST00000053317 Map2k1P31938 393 aa7.66□□□□□ -1.18
Bdnf-201ENSMUST00000053317 GabpaQ00422 454 aa7.66□□□□□ -1.18
Bdnf-201ENSMUST00000053317 Siah1bQ06985 282 aa7.66□□□□□ -1.18
Bdnf-201ENSMUST00000053317 Srd5a1Q68FF9 255 aa7.66□□□□□ -1.18
Bdnf-201ENSMUST00000053317 NostrinQ6WKZ7 506 aa7.66□□□□□ -1.18
Bdnf-201ENSMUST00000053317 Lrp2bpQ9D4C6 346 aa7.66□□□□□ -1.18
Bdnf-201ENSMUST00000053317 Ccdc7Q9D541 371 aa7.66□□□□□ -1.18
Bdnf-201ENSMUST00000053317 PfasQ5SUR0 1337 aa7.66□□□□□ -1.18
Bdnf-201ENSMUST00000053317 Gadd45bP22339 160 aa7.66□□□□□ -1.18
Bdnf-201ENSMUST00000053317 Cep63Q3UPP8 700 aa7.66□□□□□ -1.18
Bdnf-201ENSMUST00000053317 RragbQ6NTA4 374 aa7.66□□□□□ -1.18
Bdnf-201ENSMUST00000053317 BcrQ6PAJ1 1270 aa7.66□□□□□ -1.18
Bdnf-201ENSMUST00000053317 GancQ8BVW0 898 aa7.66□□□□□ -1.18
Bdnf-201ENSMUST00000053317 RadxQ8C779 850 aa7.66□□□□□ -1.18
Bdnf-201ENSMUST00000053317 Mrpl58Q8R035 206 aa7.66□□□□□ -1.18
Bdnf-201ENSMUST00000053317 Gys2Q8VCB3 704 aa7.66□□□□□ -1.18
Bdnf-201ENSMUST00000053317 Washc1Q8VDD8 475 aa7.66□□□□□ -1.18
Bdnf-201ENSMUST00000053317 Six6os1Q9CTN5 574 aa7.66□□□□□ -1.18
Bdnf-201ENSMUST00000053317 Rgs12Q8CGE9 1381 aa7.66□□□□□ -1.18
Bdnf-201ENSMUST00000053317 Myh14Q6URW6 2000 aa7.66□□□□□ -1.18
Bdnf-201ENSMUST00000053317 EporP14753 507 aa7.66□□□□□ -1.18
Bdnf-201ENSMUST00000053317 Mcm3P25206 812 aaKnown RBP7.66□□□□□ -1.18
Bdnf-201ENSMUST00000053317 Psmc2P46471 433 aa7.66□□□□□ -1.18
Bdnf-201ENSMUST00000053317 Sh3bp1P55194 680 aa7.66□□□□□ -1.18
Bdnf-201ENSMUST00000053317 Col19a1Q0VF58 1136 aa7.66□□□□□ -1.18
Bdnf-201ENSMUST00000053317 Olfr832Q7TRG9 312 aa7.66□□□□□ -1.18
Bdnf-201ENSMUST00000053317 Spata7Q80VP2 582 aa7.66□□□□□ -1.18
Bdnf-201ENSMUST00000053317 Slitrk3Q810B9 980 aa7.66□□□□□ -1.18
Bdnf-201ENSMUST00000053317 Zdhhc15Q8BGJ0 337 aa7.66□□□□□ -1.18
Bdnf-201ENSMUST00000053317 LRWD1Q8BUI3 648 aaKnown RBP7.66□□□□□ -1.18
Bdnf-201ENSMUST00000053317 Tmx1Q8VBT0 278 aa7.66□□□□□ -1.18
Bdnf-201ENSMUST00000053317 Ubxn4Q8VCH8 506 aa7.66□□□□□ -1.18
Bdnf-201ENSMUST00000053317 GhdcQ99J23 532 aa7.66□□□□□ -1.18
Bdnf-201ENSMUST00000053317 FibpQ9JI19 357 aa7.66□□□□□ -1.18
Bdnf-201ENSMUST00000053317 Sucla2Q9Z2I9 463 aa7.66□□□□□ -1.18
Bdnf-201ENSMUST00000053317 Adgra2Q91ZV8 1336 aa7.66□□□□□ -1.18
Bdnf-201ENSMUST00000053317 Arhgap4B1AUY3 965 aa7.66□□□□□ -1.18
Bdnf-201ENSMUST00000053317 Esr2O08537 530 aa7.66□□□□□ -1.18
Bdnf-201ENSMUST00000053317 A1cfQ5YD48 595 aa7.66□□□□□ -1.18
Bdnf-201ENSMUST00000053317 Myo1hQ9D6A1 958 aa7.66□□□□□ -1.18
Bdnf-201ENSMUST00000053317 Ipo7Q9EPL8 1038 aaKnown RBP7.66□□□□□ -1.18
Bdnf-201ENSMUST00000053317 Ulk4Q3V129 1303 aa7.65□□□□□ -1.18
Bdnf-201ENSMUST00000053317 RptorQ8K4Q0 1335 aa7.65□□□□□ -1.18
Bdnf-201ENSMUST00000053317 Gm8909G3UXE9 396 aa7.65□□□□□ -1.18
Bdnf-201ENSMUST00000053317 Dapk3O54784 448 aa7.65□□□□□ -1.18
Bdnf-201ENSMUST00000053317 Mov10P23249 1004 aaKnown RBP7.65□□□□□ -1.18
Bdnf-201ENSMUST00000053317 Irf5P56477 497 aa7.65□□□□□ -1.18
Bdnf-201ENSMUST00000053317 Morf4l1P60762 362 aa7.65□□□□□ -1.18
Bdnf-201ENSMUST00000053317 HmgcrQ01237 887 aa7.65□□□□□ -1.18
Bdnf-201ENSMUST00000053317 Hdgfl1Q2VPR5 283 aa7.65□□□□□ -1.18
Bdnf-201ENSMUST00000053317 Gm3414Q3TNU4 584 aa7.65□□□□□ -1.18
Bdnf-201ENSMUST00000053317 Leo1Q5XJE5 667 aa7.65□□□□□ -1.18
Bdnf-201ENSMUST00000053317 Ccdc181Q80ZU5 509 aa7.65□□□□□ -1.18
Bdnf-201ENSMUST00000053317 Iws1Q8C1D8 766 aa7.65□□□□□ -1.18
Bdnf-201ENSMUST00000053317 Ppp2r5dQ91V89 594 aa7.65□□□□□ -1.18
Bdnf-201ENSMUST00000053317 LpxnQ99N69 386 aa7.65□□□□□ -1.18
Bdnf-201ENSMUST00000053317 4931400O07RikQ9D4M5 137 aa7.65□□□□□ -1.18
Bdnf-201ENSMUST00000053317 Plcb1Q9Z1B3 1216 aa7.65□□□□□ -1.18
Bdnf-201ENSMUST00000053317 Zscan4-ps1A0A1C7CYV3 506 aa7.65□□□□□ -1.18
Bdnf-201ENSMUST00000053317 Tbkbp1A2A9T0 611 aa7.65□□□□□ -1.18
Bdnf-201ENSMUST00000053317 Mroh8E9PYI4 1049 aa7.65□□□□□ -1.18
Bdnf-201ENSMUST00000053317 2610008E11RikG3X964 669 aa7.65□□□□□ -1.18
Bdnf-201ENSMUST00000053317 Idh1O88844 414 aaKnown RBP7.65□□□□□ -1.18
Bdnf-201ENSMUST00000053317 Ranbp1P34022 203 aaKnown RBP7.65□□□□□ -1.18
Bdnf-201ENSMUST00000053317 Dnm2P39054 870 aaKnown RBP7.65□□□□□ -1.18
Bdnf-201ENSMUST00000053317 Entpd7Q3TCT4 606 aa7.65□□□□□ -1.18
Bdnf-201ENSMUST00000053317 Esyt1Q3U7R1 1092 aaKnown RBP7.65□□□□□ -1.18
Bdnf-201ENSMUST00000053317 Zfp251Q6PCX8 632 aa7.65□□□□□ -1.18
Bdnf-201ENSMUST00000053317 Ankrd24Q80VM7 985 aa7.65□□□□□ -1.18
Bdnf-201ENSMUST00000053317 Ctdspl2Q8BG15 465 aa7.65□□□□□ -1.18
Bdnf-201ENSMUST00000053317 Serpina3bQ8BYY9 420 aa7.65□□□□□ -1.18
Bdnf-201ENSMUST00000053317 Ddx19bQ8BZY3 494 aa7.65□□□□□ -1.18
Bdnf-201ENSMUST00000053317 Zfp317Q8C0Q5 607 aa7.65□□□□□ -1.18
Bdnf-201ENSMUST00000053317 NcaphQ8C156 731 aa7.65□□□□□ -1.18
Bdnf-201ENSMUST00000053317 Agbl2Q8CDK2 862 aa7.65□□□□□ -1.18
Bdnf-201ENSMUST00000053317 Kbtbd4Q8R179 534 aa7.65□□□□□ -1.18
Bdnf-201ENSMUST00000053317 Pabpc6Q9D4E6 643 aaKnown RBP7.65□□□□□ -1.18
Bdnf-201ENSMUST00000053317 Polr2dQ9D7M8 142 aaKnown RBP7.65□□□□□ -1.18
Bdnf-201ENSMUST00000053317 Ndufa8Q9DCJ5 172 aa7.65□□□□□ -1.18
Retrieved 100 of 22,080 RNA–protein pairs in 15.6 ms