RNA–Protein interactions for RNA: ENSMUST00000023352.8

Prkdc-201, Transcript of DNA-dependent protein kinase catalytic subunit, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Prkdc, Length 12,647 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prkdc-201ENSMUST00000023352 Bst2Q8R2Q8 172 aa4.92□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Pspc1Q8R326 523 aaKnown RBP4.92□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Tmem191cQ9JJB1 302 aa4.92□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Pitpnm2Q6ZPQ6 1335 aa4.92□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Zmym1Q3TJB1 983 aa4.92□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Ifit1bl2Q3U687 466 aa4.92□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Satb1Q60611 764 aa4.92□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Glg1Q61543 1175 aaKnown RBP4.92□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Stx3Q64704 289 aa4.92□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Ddx55Q6ZPL9 600 aaKnown RBP4.92□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Fnbp1Q80TY0 616 aa4.92□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Tbc1d10bQ8BHL3 798 aa4.92□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Snx30Q8CE50 437 aa4.92□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Rbm17Q8JZX4 405 aaKnown RBP4.92□□□□□ -1.62
Prkdc-201ENSMUST00000023352 MyripQ8K3I4 856 aa4.92□□□□□ -1.62
Prkdc-201ENSMUST00000023352 BlmhQ8R016 455 aa4.92□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Prkag2Q91WG5 566 aa4.92□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Snx1Q9WV80 522 aa4.92□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Rgs2O08849 211 aa4.92□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Birc5O70201 140 aa4.92□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Hnrnph2P70333 449 aaKnown RBP4.92□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Ddr1Q03146 911 aa4.92□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Zbtb16Q3UQ17 673 aa4.92□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Adamts18Q4VC17 1219 aa4.92□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Ptpn14Q62130 1189 aa4.92□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Sval3Q76I99 144 aa4.92□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Tmem179Q8BHH9 233 aa4.92□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Ipo11Q8K2V6 975 aa4.92□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Slc26a7Q8R2Z3 656 aa4.92□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Slc13a1Q9JHI4 594 aa4.92□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Wdr46Q9Z0H1 622 aaKnown RBP4.92□□□□□ -1.62
Prkdc-201ENSMUST00000023352 SelenovD3YXG1 328 aa4.92□□□□□ -1.62
Prkdc-201ENSMUST00000023352 CaluO35887 315 aa4.92□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Vti1aO89116 217 aa4.92□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Exosc10P56960 887 aaKnown RBP4.92□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Jdp2P97875 163 aa4.92□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Serpinb6dQ3UWK8 375 aa4.92□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Mei4Q8BRM6 389 aa4.92□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Cdk17Q8K0D0 523 aa4.92□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Ccdc65Q8VHI7 493 aa4.92□□□□□ -1.62
Prkdc-201ENSMUST00000023352 IkbipQ9DBZ1 373 aa4.92□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Cnpy2Q9QXT0 182 aa4.92□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Als2Q920R0 1651 aa4.92□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Ano3A2AHL1 981 aa4.92□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Gm4297D3YWB7 211 aa4.92□□□□□ -1.62
Prkdc-201ENSMUST00000023352 InhbeO08717 350 aa4.92□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Zfp781Q0P5U5 243 aa4.92□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Trim43aQ3TL54 445 aa4.92□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Agap2Q3UHD9 1186 aa4.92□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Birc2Q62210 612 aa4.92□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Ift122Q6NWV3 1182 aa4.92□□□□□ -1.62
Prkdc-201ENSMUST00000023352 LRWD1Q8BUI3 648 aaKnown RBP4.92□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Usp15Q8R5H1 981 aa4.92□□□□□ -1.62
Prkdc-201ENSMUST00000023352 KynuQ9CXF0 464 aa4.92□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Tmed10Q9D1D4 219 aaKnown RBP4.92□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Stk39Q9Z1W9 556 aa4.92□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Apba1B2RUJ5 842 aa4.92□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Pdrg1P59048 133 aa4.92□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Pde1bQ01065 535 aa4.92□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Atp1a3Q6PIC6 1013 aa4.92□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Ivns1abpQ920Q8 642 aa4.92□□□□□ -1.62
Prkdc-201ENSMUST00000023352 PdclQ9DBX2 301 aa4.92□□□□□ -1.62
Prkdc-201ENSMUST00000023352 ThegQ9JMB1 375 aa4.92□□□□□ -1.62
Prkdc-201ENSMUST00000023352 C1qtnf1Q9QXP7 281 aa4.92□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Pck1Q9Z2V4 622 aa4.92□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Rnaseh1O70338 285 aa4.92□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Pla2g4fQ50L41 855 aa4.92□□□□□ -1.62
Prkdc-201ENSMUST00000023352 PapolaQ61183 739 aa4.92□□□□□ -1.62
Prkdc-201ENSMUST00000023352 PreplQ8C167 725 aa4.92□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Ufl1Q8CCJ3 793 aaKnown RBP4.92□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Tekt2Q922G7 430 aa4.92□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Arl2bpQ9D385 163 aa4.92□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Spag17Q5S003 2320 aa4.92□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Nlrp1bA1Z198 1177 aa4.92□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Proca1B0QZF7 307 aa4.92□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Grin1P35438 938 aa4.92□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Ccdc92bQ5SUE3 299 aa4.92□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Esco1Q69Z69 843 aa4.92□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Ccdc151Q8BSN3 593 aa4.92□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Usp11Q99K46 921 aa4.92□□□□□ -1.62
Prkdc-201ENSMUST00000023352 IydQ9DCX8 285 aa4.92□□□□□ -1.62
Prkdc-201ENSMUST00000023352 PalmdQ9JHU2 551 aa4.92□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Zranb2Q9R020 330 aaKnown RBP4.92□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Scgb2b18A0A087WPA9 112 aa4.92□□□□□ -1.62
Prkdc-201ENSMUST00000023352 SnrpfP62307 86 aaKnown RBP4.92□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Sun3Q5SS91 320 aa4.92□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Cwf19l1Q8CI33 537 aa4.92□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Inpp5bQ8K337 993 aa4.92□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Rpap2Q8VC34 614 aa4.92□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Sesn3Q9CYP7 492 aa4.92□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Ubxn11Q9D572 484 aa4.92□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Ap2b1Q9DBG3 937 aa4.92□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Iqcj-Schip1A0A088MLT8 559 aa4.92□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Gm10354K7N6A0 256 aa4.92□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Schip1P0DPB4 484 aa4.92□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Gsta4P24472 222 aa4.92□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Gja8P28236 440 aa4.92□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Fam47cQ14BE7 430 aa4.92□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Adam1aQ60813 791 aa4.92□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Meis1Q60954 390 aa4.92□□□□□ -1.62
Retrieved 100 of 22,080 RNA–protein pairs in 15.2 ms