RNA–Protein interactions for RNA: ENSMUST00000003857.6

Shkbp1-201, Transcript of SH3KBP1-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shkbp1, Length 2,358 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1-201ENSMUST00000003857 Csgalnact2Q8C1F4 542 aa20.63■□□□□ 0.89
Shkbp1-201ENSMUST00000003857 St5Q924W7 1134 aa20.63■□□□□ 0.89
Shkbp1-201ENSMUST00000003857 Slc12a7Q9WVL3 1083 aa20.63■□□□□ 0.89
Shkbp1-201ENSMUST00000003857 Cd44P15379 778 aa20.63■□□□□ 0.89
Shkbp1-201ENSMUST00000003857 Gngt1Q61012 74 aa20.63■□□□□ 0.89
Shkbp1-201ENSMUST00000003857 Zrsr2Q62377 462 aaKnown RBP20.63■□□□□ 0.89
Shkbp1-201ENSMUST00000003857 Herc4Q6PAV2 1057 aa20.63■□□□□ 0.89
Shkbp1-201ENSMUST00000003857 Parp10Q8CIE4 960 aa20.63■□□□□ 0.89
Shkbp1-201ENSMUST00000003857 Erp44Q9D1Q6 406 aa20.63■□□□□ 0.89
Shkbp1-201ENSMUST00000003857 Bbof1Q3V079 533 aa20.62■□□□□ 0.89
Shkbp1-201ENSMUST00000003857 Nap1l4Q78ZA7 375 aaKnown RBP20.62■□□□□ 0.89
Shkbp1-201ENSMUST00000003857 Dusp19Q8K4T5 220 aa20.62■□□□□ 0.89
Shkbp1-201ENSMUST00000003857 TxlnbQ8VBT1 685 aa20.62■□□□□ 0.89
Shkbp1-201ENSMUST00000003857 Luc7lQ9CYI4 371 aaKnown RBP20.62■□□□□ 0.89
Shkbp1-201ENSMUST00000003857 Zcrb1Q9CZ96 217 aaKnown RBP20.62■□□□□ 0.89
Shkbp1-201ENSMUST00000003857 Ppp2r3dQ9Z176 491 aa20.62■□□□□ 0.89
Shkbp1-201ENSMUST00000003857 Btbd18A0A0A6YY25 723 aa20.61■□□□□ 0.89
Shkbp1-201ENSMUST00000003857 1700003F12RikA2AKE5 210 aa20.61■□□□□ 0.89
Shkbp1-201ENSMUST00000003857 Psmc2P46471 433 aa20.61■□□□□ 0.89
Shkbp1-201ENSMUST00000003857 Tcerg1lQ3B807 590 aa20.61■□□□□ 0.89
Shkbp1-201ENSMUST00000003857 Skap2Q3UND0 358 aa20.61■□□□□ 0.89
Shkbp1-201ENSMUST00000003857 Pcsk7Q61139 770 aa20.61■□□□□ 0.89
Shkbp1-201ENSMUST00000003857 IntS13Q8QZV7 732 aa20.61■□□□□ 0.89
Shkbp1-201ENSMUST00000003857 AagabQ8R2R3 316 aa20.61■□□□□ 0.89
Shkbp1-201ENSMUST00000003857 VillQ91YD6 859 aa20.61■□□□□ 0.89
Shkbp1-201ENSMUST00000003857 NapaQ9DB05 295 aa20.61■□□□□ 0.89
Shkbp1-201ENSMUST00000003857 Adgrf5G5E8Q8 1348 aa20.61■□□□□ 0.89
Shkbp1-201ENSMUST00000003857 Trim43cP86449 446 aa20.61■□□□□ 0.89
Shkbp1-201ENSMUST00000003857 Slc2a13Q3UHK1 637 aa20.61■□□□□ 0.89
Shkbp1-201ENSMUST00000003857 Pacsin1Q61644 441 aa20.61■□□□□ 0.89
Shkbp1-201ENSMUST00000003857 Krt42Q6IFX2 452 aa20.61■□□□□ 0.89
Shkbp1-201ENSMUST00000003857 Tlr11Q6R5P0 926 aa20.61■□□□□ 0.89
Shkbp1-201ENSMUST00000003857 Ppp1r11Q8K1L5 131 aa20.61■□□□□ 0.89
Shkbp1-201ENSMUST00000003857 Creb3l3Q91XE9 479 aa20.61■□□□□ 0.89
Shkbp1-201ENSMUST00000003857 Osbpl1aQ91XL9 950 aa20.61■□□□□ 0.89
Shkbp1-201ENSMUST00000003857 Nap1l5Q9JJF0 156 aa20.61■□□□□ 0.89
Shkbp1-201ENSMUST00000003857 DexiQ9WUQ7 95 aa20.61■□□□□ 0.89
Shkbp1-201ENSMUST00000003857 Scgb2b12S4R2L0 112 aa20.61■□□□□ 0.89
Shkbp1-201ENSMUST00000003857 E9QMW4 1145 aa20.6■□□□□ 0.89
Shkbp1-201ENSMUST00000003857 Pgrmc1O55022 195 aa20.6■□□□□ 0.89
Shkbp1-201ENSMUST00000003857 Hps5P59438 1126 aa20.6■□□□□ 0.89
Shkbp1-201ENSMUST00000003857 Cyp2e1Q05421 493 aa20.6■□□□□ 0.89
Shkbp1-201ENSMUST00000003857 WdpcpQ8C456 722 aa20.6■□□□□ 0.89
Shkbp1-201ENSMUST00000003857 LgsnQ8CIX8 563 aa20.6■□□□□ 0.89
Shkbp1-201ENSMUST00000003857 Tbx18Q9EPZ6 613 aa20.6■□□□□ 0.89
Shkbp1-201ENSMUST00000003857 Sertad2Q9JJG5 309 aa20.6■□□□□ 0.89
Shkbp1-201ENSMUST00000003857 Slfn14V9GXG1 899 aa20.6■□□□□ 0.89
Shkbp1-201ENSMUST00000003857 Akr1b10G5E895 316 aa20.6■□□□□ 0.89
Shkbp1-201ENSMUST00000003857 Stat3P42227 770 aaKnown RBP20.6■□□□□ 0.89
Shkbp1-201ENSMUST00000003857 Terf1P70371 421 aa20.6■□□□□ 0.89
Shkbp1-201ENSMUST00000003857 Foxd1Q61345 456 aa20.6■□□□□ 0.89
Shkbp1-201ENSMUST00000003857 Ccpg1Q640L3 753 aa20.6■□□□□ 0.89
Shkbp1-201ENSMUST00000003857 Rbm41Q8JZV4 413 aa20.6■□□□□ 0.89
Shkbp1-201ENSMUST00000003857 Acot3Q9QYR7 432 aa20.6■□□□□ 0.89
Shkbp1-201ENSMUST00000003857 Tjp2Q9Z0U1 1167 aaKnown RBP20.6■□□□□ 0.89
Shkbp1-201ENSMUST00000003857 Ttc38A3KMP2 465 aa20.59■□□□□ 0.89
Shkbp1-201ENSMUST00000003857 Kcnh2O35219 1162 aa20.59■□□□□ 0.89
Shkbp1-201ENSMUST00000003857 Nap1l1P28656 391 aaKnown RBP20.59■□□□□ 0.89
Shkbp1-201ENSMUST00000003857 Nedd1P33215 660 aa20.59■□□□□ 0.89
Shkbp1-201ENSMUST00000003857 Qrich1Q3UA37 777 aa20.59■□□□□ 0.89
Shkbp1-201ENSMUST00000003857 Tax1bp1Q3UKC1 814 aaKnown RBP20.59■□□□□ 0.89
Shkbp1-201ENSMUST00000003857 Serpinb6dQ3UWK8 375 aa20.59■□□□□ 0.89
Shkbp1-201ENSMUST00000003857 Nlrp2Q4PLS0 1046 aaKnown RBP20.59■□□□□ 0.89
Shkbp1-201ENSMUST00000003857 Ift20Q61025 132 aa20.59■□□□□ 0.89
Shkbp1-201ENSMUST00000003857 Krt9Q6RHW0 743 aa20.59■□□□□ 0.89
Shkbp1-201ENSMUST00000003857 Armc6Q8BNU0 468 aa20.59■□□□□ 0.89
Shkbp1-201ENSMUST00000003857 AopepQ8BXQ6 817 aa20.59■□□□□ 0.89
Shkbp1-201ENSMUST00000003857 Ube2sQ921J4 223 aa20.59■□□□□ 0.89
Shkbp1-201ENSMUST00000003857 Asic2Q925H0 512 aa20.59■□□□□ 0.89
Shkbp1-201ENSMUST00000003857 Six6os1Q9CTN5 574 aa20.59■□□□□ 0.89
Shkbp1-201ENSMUST00000003857 LrmdaQ9D9B4 229 aa20.59■□□□□ 0.89
Shkbp1-201ENSMUST00000003857 Ddx25Q9QY15 484 aa20.59■□□□□ 0.89
Shkbp1-201ENSMUST00000003857 Spocd1B1ASB6 936 aa20.59■□□□□ 0.89
Shkbp1-201ENSMUST00000003857 Gja3Q64448 417 aa20.59■□□□□ 0.89
Shkbp1-201ENSMUST00000003857 WaplQ65Z40 1200 aaKnown RBP20.59■□□□□ 0.89
Shkbp1-201ENSMUST00000003857 NfrkbQ6PIJ4 1296 aaKnown RBP20.59■□□□□ 0.89
Shkbp1-201ENSMUST00000003857 Taok3Q8BYC6 898 aa20.59■□□□□ 0.89
Shkbp1-201ENSMUST00000003857 Kiaa1024Q8K3V7 917 aa20.59■□□□□ 0.89
Shkbp1-201ENSMUST00000003857 Ppp1r3aQ99MR9 1089 aa20.59■□□□□ 0.89
Shkbp1-201ENSMUST00000003857 Ears2Q9CXJ1 523 aa20.59■□□□□ 0.89
Shkbp1-201ENSMUST00000003857 Mroh8E9PYI4 1049 aa20.58■□□□□ 0.89
Shkbp1-201ENSMUST00000003857 Sec24cG3X972 1096 aaKnown RBP20.58■□□□□ 0.89
Shkbp1-201ENSMUST00000003857 Zfpm1O35615 995 aa20.58■□□□□ 0.89
Shkbp1-201ENSMUST00000003857 P4hbP09103 509 aaKnown RBP20.58■□□□□ 0.89
Shkbp1-201ENSMUST00000003857 Hsd17b1P51656 344 aa20.58■□□□□ 0.89
Shkbp1-201ENSMUST00000003857 Pcif1P59114 706 aa20.58■□□□□ 0.89
Shkbp1-201ENSMUST00000003857 Acsbg2Q2XU92 667 aa20.58■□□□□ 0.89
Shkbp1-201ENSMUST00000003857 Hdhd2Q3UGR5 259 aa20.58■□□□□ 0.89
Shkbp1-201ENSMUST00000003857 Coro7Q9D2V7 922 aa20.58■□□□□ 0.89
Shkbp1-201ENSMUST00000003857 Sept3Q9Z1S5 350 aa20.58■□□□□ 0.89
Shkbp1-201ENSMUST00000003857 A0A286YCQ6 122 aa20.58■□□□□ 0.88
Shkbp1-201ENSMUST00000003857 Tcp10bE9PYJ0 438 aa20.58■□□□□ 0.88
Shkbp1-201ENSMUST00000003857 Cetn3O35648 167 aa20.58■□□□□ 0.88
Shkbp1-201ENSMUST00000003857 Pcdha4O88689 947 aa20.58■□□□□ 0.88
Shkbp1-201ENSMUST00000003857 Mpp3O88910 568 aa20.58■□□□□ 0.88
Shkbp1-201ENSMUST00000003857 Gna14P30677 355 aa20.58■□□□□ 0.88
Shkbp1-201ENSMUST00000003857 Nr2f2P43135 414 aa20.58■□□□□ 0.88
Shkbp1-201ENSMUST00000003857 Fbln1Q08879 705 aa20.58■□□□□ 0.88
Shkbp1-201ENSMUST00000003857 Nhej1Q3KNJ2 295 aa20.58■□□□□ 0.88
Shkbp1-201ENSMUST00000003857 Krt74Q6IFZ9 495 aa20.58■□□□□ 0.88
Retrieved 100 of 22,080 RNA–protein pairs in 24.6 ms