RNA–Protein interactions for RNA: ENST00000641947.1

PHGDH-232, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,774 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-232ENST00000641947 CST9Q5W186 159 aa19.76■□□□□ 0.75
PHGDH-232ENST00000641947 NCAPH2Q6IBW4 605 aa19.76■□□□□ 0.75
PHGDH-232ENST00000641947 CCDC34Q96HJ3 373 aa19.76■□□□□ 0.75
PHGDH-232ENST00000641947 PPP1R9BQ96SB3 815 aa19.76■□□□□ 0.75
PHGDH-232ENST00000641947 WDR11Q9BZH6 1224 aa19.76■□□□□ 0.75
PHGDH-232ENST00000641947 CUEDC2Q9H467 287 aa19.76■□□□□ 0.75
PHGDH-232ENST00000641947 UBIAD1Q9Y5Z9 338 aa19.76■□□□□ 0.75
PHGDH-232ENST00000641947 POTEB3A0JP26 581 aa19.75■□□□□ 0.75
PHGDH-232ENST00000641947 UNCXA6NJT0 531 aa19.75■□□□□ 0.75
PHGDH-232ENST00000641947 KLRC4O43908 158 aa19.75■□□□□ 0.75
PHGDH-232ENST00000641947 PSMD10O75832 226 aa19.75■□□□□ 0.75
PHGDH-232ENST00000641947 FKBP1BP68106 108 aa19.75■□□□□ 0.75
PHGDH-232ENST00000641947 SNAPC2Q13487 334 aa19.75■□□□□ 0.75
PHGDH-232ENST00000641947 NCAPHQ15003 741 aa19.75■□□□□ 0.75
PHGDH-232ENST00000641947 POTEBQ6S5H4 581 aa19.75■□□□□ 0.75
PHGDH-232ENST00000641947 TRIML1Q8N9V2 468 aa19.75■□□□□ 0.75
PHGDH-232ENST00000641947 MS4A4AQ96JQ5 239 aa19.75■□□□□ 0.75
PHGDH-232ENST00000641947 GSDMAQ96QA5 445 aa19.75■□□□□ 0.75
PHGDH-232ENST00000641947 CCT6AP40227 531 aaKnown RBP19.75■□□□□ 0.75
PHGDH-232ENST00000641947 SETQ01105 290 aaPredicted RBP19.75■□□□□ 0.75
PHGDH-232ENST00000641947 MCM6Q14566 821 aa19.75■□□□□ 0.75
PHGDH-232ENST00000641947 FASTKD5Q7L8L6 764 aaKnown RBP19.75■□□□□ 0.75
PHGDH-232ENST00000641947 RIOX2Q8IUF8 465 aa19.75■□□□□ 0.75
PHGDH-232ENST00000641947 SMYD4Q8IYR2 804 aaPredicted RBP19.75■□□□□ 0.75
PHGDH-232ENST00000641947 MB21D1Q8N884 522 aa19.75■□□□□ 0.75
PHGDH-232ENST00000641947 RAD54LQ92698 747 aa19.75■□□□□ 0.75
PHGDH-232ENST00000641947 PAGR1Q9BTK6 254 aa19.75■□□□□ 0.75
PHGDH-232ENST00000641947 SPATC1LQ9H0A9 340 aa19.75■□□□□ 0.75
PHGDH-232ENST00000641947 MAGEF1Q9HAY2 307 aa19.75■□□□□ 0.75
PHGDH-232ENST00000641947 RABGAP1Q9Y3P9 1069 aa19.75■□□□□ 0.75
PHGDH-232ENST00000641947 ASTN1O14525 1302 aa19.74■□□□□ 0.75
PHGDH-232ENST00000641947 CD44P16070 742 aaKnown RBP19.74■□□□□ 0.75
PHGDH-232ENST00000641947 LRCH2Q5VUJ6 765 aa19.74■□□□□ 0.75
PHGDH-232ENST00000641947 OTOP1Q7RTM1 612 aa19.74■□□□□ 0.75
PHGDH-232ENST00000641947 MED15Q96RN5 788 aa19.74■□□□□ 0.75
PHGDH-232ENST00000641947 NAT10Q9H0A0 1025 aaKnown RBP19.74■□□□□ 0.75
PHGDH-232ENST00000641947 HSD3B7Q9H2F3 369 aa19.74■□□□□ 0.75
PHGDH-232ENST00000641947 RBPJLQ9UBG7 517 aa19.74■□□□□ 0.75
PHGDH-232ENST00000641947 STK17AQ9UEE5 414 aa19.74■□□□□ 0.75
PHGDH-232ENST00000641947 RPN1P04843 607 aaKnown RBP19.73■□□□□ 0.75
PHGDH-232ENST00000641947 SPATA31C1P0DKV0 1188 aa19.73■□□□□ 0.75
PHGDH-232ENST00000641947 CCDC173Q0VFZ6 552 aa19.73■□□□□ 0.75
PHGDH-232ENST00000641947 DHX8Q14562 1220 aaKnown RBP19.73■□□□□ 0.75
PHGDH-232ENST00000641947 ARHGEF16Q5VV41 709 aa19.73■□□□□ 0.75
PHGDH-232ENST00000641947 B3GNT9Q6UX72 402 aa19.73■□□□□ 0.75
PHGDH-232ENST00000641947 LARP4BQ92615 738 aaKnown RBP19.73■□□□□ 0.75
PHGDH-232ENST00000641947 CDK5RAP3Q96JB5 506 aa19.73■□□□□ 0.75
PHGDH-232ENST00000641947 ZNF577Q9BSK1 485 aa19.73■□□□□ 0.75
PHGDH-232ENST00000641947 MOV10L1Q9BXT6 1211 aaKnown RBP19.73■□□□□ 0.75
PHGDH-232ENST00000641947 TRIM9Q9C026 710 aa19.73■□□□□ 0.75
PHGDH-232ENST00000641947 KCNH7Q9NS40 1196 aa19.73■□□□□ 0.75
PHGDH-232ENST00000641947 POTEFA5A3E0 1075 aa19.72■□□□□ 0.75
PHGDH-232ENST00000641947 BCRP11274 1271 aa19.72■□□□□ 0.75
PHGDH-232ENST00000641947 MYCLP12524 364 aaPredicted RBP19.72■□□□□ 0.75
PHGDH-232ENST00000641947 ITGB3BPQ13352 177 aaPredicted RBP19.72■□□□□ 0.75
PHGDH-232ENST00000641947 PPP2R5CQ13362 524 aa19.72■□□□□ 0.75
PHGDH-232ENST00000641947 Q3C1V9 767 aa19.72■□□□□ 0.75
PHGDH-232ENST00000641947 POTEGQ6S5H5 508 aa19.72■□□□□ 0.75
PHGDH-232ENST00000641947 NIPA1Q7RTP0 329 aa19.72■□□□□ 0.75
PHGDH-232ENST00000641947 CATSPER3Q86XQ3 398 aa19.72■□□□□ 0.75
PHGDH-232ENST00000641947 C2orf69Q8N8R5 385 aa19.72■□□□□ 0.75
PHGDH-232ENST00000641947 CHST13Q8NET6 341 aa19.72■□□□□ 0.75
PHGDH-232ENST00000641947 C7orf25Q9BPX7 421 aa19.72■□□□□ 0.75
PHGDH-232ENST00000641947 JADE2Q9NQC1 790 aa19.72■□□□□ 0.75
PHGDH-232ENST00000641947 PKD2L1Q9P0L9 805 aa19.72■□□□□ 0.75
PHGDH-232ENST00000641947 KIAA1024Q9UPX6 916 aa19.72■□□□□ 0.75
PHGDH-232ENST00000641947 MCM3APO60318 1980 aa19.72■□□□□ 0.75
PHGDH-232ENST00000641947 KDM3AQ9Y4C1 1321 aa19.72■□□□□ 0.75
PHGDH-232ENST00000641947 E9PMD0 336 aa19.72■□□□□ 0.75
PHGDH-232ENST00000641947 ADCY5O95622 1261 aa19.72■□□□□ 0.75
PHGDH-232ENST00000641947 CYP2C8P10632 490 aa19.72■□□□□ 0.75
PHGDH-232ENST00000641947 BRI3BPQ8WY22 251 aa19.72■□□□□ 0.75
PHGDH-232ENST00000641947 UNC45AQ9H3U1 944 aa19.72■□□□□ 0.75
PHGDH-232ENST00000641947 PLXNB2O15031 1838 aa19.72■□□□□ 0.75
PHGDH-232ENST00000641947 LOXHD1Q8IVV2 1947 aa19.71■□□□□ 0.75
PHGDH-232ENST00000641947 MYMKA6NI61 221 aa19.71■□□□□ 0.75
PHGDH-232ENST00000641947 BECN2A8MW95 431 aa19.71■□□□□ 0.75
PHGDH-232ENST00000641947 IPO5O00410 1097 aaKnown RBP19.71■□□□□ 0.75
PHGDH-232ENST00000641947 DHX15O43143 795 aaKnown RBP19.71■□□□□ 0.75
PHGDH-232ENST00000641947 CHMP2AO43633 222 aa19.71■□□□□ 0.75
PHGDH-232ENST00000641947 GAS7O60861 476 aa19.71■□□□□ 0.75
PHGDH-232ENST00000641947 PLCB2Q00722 1185 aa19.71■□□□□ 0.75
PHGDH-232ENST00000641947 CNTN2Q02246 1040 aa19.71■□□□□ 0.75
PHGDH-232ENST00000641947 KMT5BQ4FZB7 885 aa19.71■□□□□ 0.75
PHGDH-232ENST00000641947 CHADLQ6NUI6 762 aa19.71■□□□□ 0.75
PHGDH-232ENST00000641947 VSIG10LQ86VR7 867 aa19.71■□□□□ 0.75
PHGDH-232ENST00000641947 MLKLQ8NB16 471 aa19.71■□□□□ 0.75
PHGDH-232ENST00000641947 ANP32BQ92688 251 aaKnown RBP19.71■□□□□ 0.75
PHGDH-232ENST00000641947 AGO4Q9HCK5 861 aaKnown RBP19.71■□□□□ 0.75
PHGDH-232ENST00000641947 PPP1R3GB7ZBB8 358 aa19.7■□□□□ 0.74
PHGDH-232ENST00000641947 BTBD19C9JJ37 291 aa19.7■□□□□ 0.74
PHGDH-232ENST00000641947 RGS20O76081 388 aa19.7■□□□□ 0.74
PHGDH-232ENST00000641947 MYL1P05976 194 aa19.7■□□□□ 0.74
PHGDH-232ENST00000641947 NR3C2P08235 984 aa19.7■□□□□ 0.74
PHGDH-232ENST00000641947 OSBPP22059 807 aa19.7■□□□□ 0.74
PHGDH-232ENST00000641947 RPA1P27694 616 aa19.7■□□□□ 0.74
PHGDH-232ENST00000641947 PSMC6P62333 389 aa19.7■□□□□ 0.74
PHGDH-232ENST00000641947 SEMA3FQ13275 785 aa19.7■□□□□ 0.74
PHGDH-232ENST00000641947 SV2BQ7L1I2 683 aa19.7■□□□□ 0.74
PHGDH-232ENST00000641947 NCAPG2Q86XI2 1143 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms