RNA–Protein interactions for RNA: ENST00000641927.1

PHGDH-230, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,678 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-230ENST00000641927 FERMT2Q96AC1 680 aa19.76■□□□□ 0.75
PHGDH-230ENST00000641927 CLIC6Q96NY7 704 aa19.76■□□□□ 0.75
PHGDH-230ENST00000641927 INPP4AQ96PE3 977 aaPredicted RBP19.76■□□□□ 0.75
PHGDH-230ENST00000641927 MTMR9Q96QG7 549 aa19.76■□□□□ 0.75
PHGDH-230ENST00000641927 ZNF577Q9BSK1 485 aa19.76■□□□□ 0.75
PHGDH-230ENST00000641927 KCNMB3Q9NPA1 279 aa19.76■□□□□ 0.75
PHGDH-230ENST00000641927 FBXO2Q9UK22 296 aaPredicted RBP19.76■□□□□ 0.75
PHGDH-230ENST00000641927 GABRQQ9UN88 632 aa19.76■□□□□ 0.75
PHGDH-230ENST00000641927 DDX11L8A8MPP1 907 aa19.75■□□□□ 0.75
PHGDH-230ENST00000641927 HOXC6P09630 235 aa19.75■□□□□ 0.75
PHGDH-230ENST00000641927 PRPHP41219 470 aa19.75■□□□□ 0.75
PHGDH-230ENST00000641927 FLT3LGP49771 235 aa19.75■□□□□ 0.75
PHGDH-230ENST00000641927 CAP1Q01518 475 aa19.75■□□□□ 0.75
PHGDH-230ENST00000641927 PRKCZQ05513 592 aa19.75■□□□□ 0.75
PHGDH-230ENST00000641927 FBXO16Q8IX29 292 aaPredicted RBP19.75■□□□□ 0.75
PHGDH-230ENST00000641927 ETNPPLQ8TBG4 499 aa19.75■□□□□ 0.75
PHGDH-230ENST00000641927 HAS1Q92839 578 aa19.75■□□□□ 0.75
PHGDH-230ENST00000641927 GPRASP2Q96D09 838 aa19.75■□□□□ 0.75
PHGDH-230ENST00000641927 TINF2Q9BSI4 451 aa19.75■□□□□ 0.75
PHGDH-230ENST00000641927 SRPRBQ9Y5M8 271 aaKnown RBP19.75■□□□□ 0.75
PHGDH-230ENST00000641927 TBX3O15119 743 aa19.75■□□□□ 0.75
PHGDH-230ENST00000641927 RGS20O76081 388 aa19.75■□□□□ 0.75
PHGDH-230ENST00000641927 HOXD10P28358 340 aa19.75■□□□□ 0.75
PHGDH-230ENST00000641927 TECP42680 631 aa19.75■□□□□ 0.75
PHGDH-230ENST00000641927 GRIN1Q05586 938 aa19.75■□□□□ 0.75
PHGDH-230ENST00000641927 ARHGEF6Q15052 776 aa19.75■□□□□ 0.75
PHGDH-230ENST00000641927 CCL14Q16627 93 aa19.75■□□□□ 0.75
PHGDH-230ENST00000641927 TMEM266Q2M3C6 531 aa19.75■□□□□ 0.75
PHGDH-230ENST00000641927 MORC4Q8TE76 937 aa19.75■□□□□ 0.75
PHGDH-230ENST00000641927 FAM20AQ96MK3 541 aa19.75■□□□□ 0.75
PHGDH-230ENST00000641927 TTC12Q9H892 705 aaPredicted RBP19.75■□□□□ 0.75
PHGDH-230ENST00000641927 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.75■□□□□ 0.75
PHGDH-230ENST00000641927 PCDHA12Q9UN75 941 aa19.75■□□□□ 0.75
PHGDH-230ENST00000641927 IPO5O00410 1097 aaKnown RBP19.74■□□□□ 0.75
PHGDH-230ENST00000641927 CUTAO60888 179 aa19.74■□□□□ 0.75
PHGDH-230ENST00000641927 GADD45BO75293 160 aaPredicted RBP19.74■□□□□ 0.75
PHGDH-230ENST00000641927 NFKBIBQ15653 356 aa19.74■□□□□ 0.75
PHGDH-230ENST00000641927 IL17AQ16552 155 aa19.74■□□□□ 0.75
PHGDH-230ENST00000641927 LRCH2Q5VUJ6 765 aa19.74■□□□□ 0.75
PHGDH-230ENST00000641927 MAMDC4Q6UXC1 1216 aa19.74■□□□□ 0.75
PHGDH-230ENST00000641927 CDHR1Q96JP9 859 aa19.74■□□□□ 0.75
PHGDH-230ENST00000641927 CSRNP2Q9H175 543 aa19.74■□□□□ 0.75
PHGDH-230ENST00000641927 AGO4Q9HCK5 861 aaKnown RBP19.74■□□□□ 0.75
PHGDH-230ENST00000641927 MORC2Q9Y6X9 1032 aaPredicted RBP19.74■□□□□ 0.75
PHGDH-230ENST00000641927 MAFGO15525 162 aa19.73■□□□□ 0.75
PHGDH-230ENST00000641927 SPECC1Q5M775 1068 aa19.73■□□□□ 0.75
PHGDH-230ENST00000641927 LMBRD1Q9NUN5 540 aa19.73■□□□□ 0.75
PHGDH-230ENST00000641927 FLRT1Q9NZU1 646 aa19.73■□□□□ 0.75
PHGDH-230ENST00000641927 SYNGAP1Q96PV0 1343 aa19.73■□□□□ 0.75
PHGDH-230ENST00000641927 MCM3APO60318 1980 aa19.72■□□□□ 0.75
PHGDH-230ENST00000641927 GAS7O60861 476 aa19.72■□□□□ 0.75
PHGDH-230ENST00000641927 UBE2HP62256 183 aa19.72■□□□□ 0.75
PHGDH-230ENST00000641927 ADALQ6DHV7 355 aa19.72■□□□□ 0.75
PHGDH-230ENST00000641927 MSL3Q8N5Y2 521 aaKnown RBP19.72■□□□□ 0.75
PHGDH-230ENST00000641927 SLC5A5Q92911 643 aa19.72■□□□□ 0.75
PHGDH-230ENST00000641927 RAB34Q9BZG1 259 aa19.72■□□□□ 0.75
PHGDH-230ENST00000641927 SRRDQ9UH36 339 aa19.72■□□□□ 0.75
PHGDH-230ENST00000641927 LRRC37A2A6NM11 1700 aa19.72■□□□□ 0.75
PHGDH-230ENST00000641927 SPATA31C2B4DYI2 1134 aa19.71■□□□□ 0.75
PHGDH-230ENST00000641927 DDX39AO00148 427 aaKnown RBP19.71■□□□□ 0.75
PHGDH-230ENST00000641927 SNAI1O95863 264 aaPredicted RBP19.71■□□□□ 0.75
PHGDH-230ENST00000641927 GNRH1P01148 92 aa19.71■□□□□ 0.75
PHGDH-230ENST00000641927 XRCC5P13010 732 aaKnown RBP19.71■□□□□ 0.75
PHGDH-230ENST00000641927 CYP2C19P33261 490 aa19.71■□□□□ 0.75
PHGDH-230ENST00000641927 AXDND1Q5T1B0 1012 aaPredicted RBP19.71■□□□□ 0.75
PHGDH-230ENST00000641927 OLFML2BQ68BL8 750 aa19.71■□□□□ 0.75
PHGDH-230ENST00000641927 SDF4Q9BRK5 362 aa19.71■□□□□ 0.75
PHGDH-230ENST00000641927 TEKT3Q9BXF9 490 aa19.71■□□□□ 0.75
PHGDH-230ENST00000641927 ZHX1Q9UKY1 873 aaPredicted RBP19.71■□□□□ 0.75
PHGDH-230ENST00000641927 ATP9AO75110 1047 aa19.71■□□□□ 0.75
PHGDH-230ENST00000641927 LONP1P36776 959 aaKnown RBP19.71■□□□□ 0.75
PHGDH-230ENST00000641927 FXR2P51116 673 aaKnown RBP eCLIP19.71■□□□□ 0.751e-6■■■■□ 19.3
PHGDH-230ENST00000641927 SEMA3FQ13275 785 aa19.71■□□□□ 0.75
PHGDH-230ENST00000641927 VTA1Q9NP79 307 aa19.71■□□□□ 0.75
PHGDH-230ENST00000641927 POTEMA6NI47 508 aa19.7■□□□□ 0.74
PHGDH-230ENST00000641927 CHMP2AO43633 222 aa19.7■□□□□ 0.74
PHGDH-230ENST00000641927 SORBS3O60504 671 aa19.7■□□□□ 0.74
PHGDH-230ENST00000641927 ICAM3P32942 547 aa19.7■□□□□ 0.74
PHGDH-230ENST00000641927 ITGB3BPQ13352 177 aaPredicted RBP19.7■□□□□ 0.74
PHGDH-230ENST00000641927 NCAPH2Q6IBW4 605 aa19.7■□□□□ 0.74
PHGDH-230ENST00000641927 ZNF579Q8NAF0 562 aaKnown RBP19.7■□□□□ 0.74
PHGDH-230ENST00000641927 RAET1EQ8TD07 263 aa19.7■□□□□ 0.74
PHGDH-230ENST00000641927 RIT2Q99578 217 aa19.7■□□□□ 0.74
PHGDH-230ENST00000641927 ABHD16BQ9H3Z7 469 aa19.7■□□□□ 0.74
PHGDH-230ENST00000641927 PDGFCQ9NRA1 345 aa19.7■□□□□ 0.74
PHGDH-230ENST00000641927 TBC1D22BQ9NU19 505 aa19.7■□□□□ 0.74
PHGDH-230ENST00000641927 LRWD1Q9UFC0 647 aa19.7■□□□□ 0.74
PHGDH-230ENST00000641927 TCEAL9Q9UHQ7 104 aa19.7■□□□□ 0.74
PHGDH-230ENST00000641927 KIAA1217Q5T5P2 1943 aa19.69■□□□□ 0.74
PHGDH-230ENST00000641927 PSMD10O75832 226 aa19.69■□□□□ 0.74
PHGDH-230ENST00000641927 ACVR2BQ13705 512 aa19.69■□□□□ 0.74
PHGDH-230ENST00000641927 TTLL4Q14679 1199 aa19.69■□□□□ 0.74
PHGDH-230ENST00000641927 PRAMEF19Q5SWL8 479 aa19.69■□□□□ 0.74
PHGDH-230ENST00000641927 KCNV1Q6PIU1 500 aa19.69■□□□□ 0.74
PHGDH-230ENST00000641927 SHC4Q6S5L8 630 aa19.69■□□□□ 0.74
PHGDH-230ENST00000641927 FSIP1Q8NA03 581 aa19.69■□□□□ 0.74
PHGDH-230ENST00000641927 SCFD2Q8WU76 684 aa19.69■□□□□ 0.74
PHGDH-230ENST00000641927 A0A1W2PQ27 194 aa19.68■□□□□ 0.74
PHGDH-230ENST00000641927 A0A1W2PQ64 194 aa19.68■□□□□ 0.74
PHGDH-230ENST00000641927 A0A1W2PQD8 194 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms