RNA–Protein interactions for RNA: ENST00000641828.1

CASC19-260, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 2,001 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-260ENST00000641828 ATP7BP35670 1465 aa6.63□□□□□ -1.35
CASC19-260ENST00000641828 SOS1Q07889 1333 aaPredicted RBP6.63□□□□□ -1.35
CASC19-260ENST00000641828 TRPM3Q9HCF6 1732 aaPredicted RBP6.63□□□□□ -1.35
CASC19-260ENST00000641828 FAM221AA4D161 298 aa6.63□□□□□ -1.35
CASC19-260ENST00000641828 A6NNZ2 444 aa6.63□□□□□ -1.35
CASC19-260ENST00000641828 SOBPA7XYQ1 873 aa6.63□□□□□ -1.35
CASC19-260ENST00000641828 WDHD1O75717 1129 aaPredicted RBP6.63□□□□□ -1.35
CASC19-260ENST00000641828 TOP1P11387 765 aaKnown RBP6.63□□□□□ -1.35
CASC19-260ENST00000641828 MCM3P25205 808 aa6.63□□□□□ -1.35
CASC19-260ENST00000641828 IL13P35225 146 aa6.63□□□□□ -1.35
CASC19-260ENST00000641828 GIPRP48546 466 aa6.63□□□□□ -1.35
CASC19-260ENST00000641828 UBASH3AP57075 661 aa6.63□□□□□ -1.35
CASC19-260ENST00000641828 NLRP12P59046 1061 aa6.63□□□□□ -1.35
CASC19-260ENST00000641828 SCRN1Q12765 414 aa6.63□□□□□ -1.35
CASC19-260ENST00000641828 FSTL1Q12841 308 aa6.63□□□□□ -1.35
CASC19-260ENST00000641828 CWF19L2Q2TBE0 894 aaKnown RBP6.63□□□□□ -1.35
CASC19-260ENST00000641828 TUBB8Q3ZCM7 444 aa6.63□□□□□ -1.35
CASC19-260ENST00000641828 RNF187Q5TA31 235 aaPredicted RBP6.63□□□□□ -1.35
CASC19-260ENST00000641828 RASIP1Q5U651 963 aa6.63□□□□□ -1.35
CASC19-260ENST00000641828 BLOC1S2Q6QNY1 142 aa6.63□□□□□ -1.35
CASC19-260ENST00000641828 SPATS2Q86XZ4 545 aaKnown RBP6.63□□□□□ -1.35
CASC19-260ENST00000641828 TRIM22Q8IYM9 498 aa6.63□□□□□ -1.35
CASC19-260ENST00000641828 CCDC12Q8WUD4 166 aaPredicted RBP6.63□□□□□ -1.35
CASC19-260ENST00000641828 PLD4Q96BZ4 506 aa6.63□□□□□ -1.35
CASC19-260ENST00000641828 GOLPH3LQ9H4A5 285 aa6.63□□□□□ -1.35
CASC19-260ENST00000641828 ATXN7L1Q9ULK2 861 aaPredicted RBP6.63□□□□□ -1.35
CASC19-260ENST00000641828 SHTN1A0MZ66 631 aa6.62□□□□□ -1.35
CASC19-260ENST00000641828 H0YHG0 523 aa6.62□□□□□ -1.35
CASC19-260ENST00000641828 GLRX3O76003 335 aaKnown RBP6.62□□□□□ -1.35
CASC19-260ENST00000641828 PRPF6O94906 941 aaKnown RBP6.62□□□□□ -1.35
CASC19-260ENST00000641828 MAP4K4O95819 1239 aaPredicted RBP6.62□□□□□ -1.35
CASC19-260ENST00000641828 GHRHP01286 108 aa6.62□□□□□ -1.35
CASC19-260ENST00000641828 GCFC2P16383 781 aaKnown RBP6.62□□□□□ -1.35
CASC19-260ENST00000641828 SCP2P22307 547 aa6.62□□□□□ -1.35
CASC19-260ENST00000641828 NF2P35240 595 aa6.62□□□□□ -1.35
CASC19-260ENST00000641828 SSR1P43307 286 aaKnown RBP6.62□□□□□ -1.35
CASC19-260ENST00000641828 SARNPP82979 210 aaKnown RBP6.62□□□□□ -1.35
CASC19-260ENST00000641828 PTH1RQ03431 593 aa6.62□□□□□ -1.35
CASC19-260ENST00000641828 CRYMQ14894 314 aa6.62□□□□□ -1.35
CASC19-260ENST00000641828 NCAPHQ15003 741 aa6.62□□□□□ -1.35
CASC19-260ENST00000641828 DDB1Q16531 1140 aa6.62□□□□□ -1.35
CASC19-260ENST00000641828 KIF4BQ2VIQ3 1234 aa6.62□□□□□ -1.35
CASC19-260ENST00000641828 FBXW10Q5XX13 1052 aa6.62□□□□□ -1.35
CASC19-260ENST00000641828 CREB3L3Q68CJ9 461 aa6.62□□□□□ -1.35
CASC19-260ENST00000641828 ADALQ6DHV7 355 aa6.62□□□□□ -1.35
CASC19-260ENST00000641828 WDR93Q6P2C0 686 aa6.62□□□□□ -1.35
CASC19-260ENST00000641828 TMEM139Q8IV31 216 aa6.62□□□□□ -1.35
CASC19-260ENST00000641828 VSTM4Q8IW00 320 aa6.62□□□□□ -1.35
CASC19-260ENST00000641828 AMOTL1Q8IY63 956 aa6.62□□□□□ -1.35
CASC19-260ENST00000641828 FMR1NBQ8N0W7 255 aaPredicted RBP6.62□□□□□ -1.35
CASC19-260ENST00000641828 CELF2-AS1Q8N7Q2 184 aa6.62□□□□□ -1.35
CASC19-260ENST00000641828 FSIP1Q8NA03 581 aa6.62□□□□□ -1.35
CASC19-260ENST00000641828 SSH3Q8TE77 659 aa6.62□□□□□ -1.35
CASC19-260ENST00000641828 MAP4K1Q92918 833 aa6.62□□□□□ -1.35
CASC19-260ENST00000641828 PNKPQ96T60 521 aa6.62□□□□□ -1.35
CASC19-260ENST00000641828 POP1Q99575 1024 aaKnown RBP6.62□□□□□ -1.35
CASC19-260ENST00000641828 BAG1Q99933 345 aaPredicted RBP6.62□□□□□ -1.35
CASC19-260ENST00000641828 CLEC4MQ9H2X3 399 aaPredicted RBP6.62□□□□□ -1.35
CASC19-260ENST00000641828 NMRK2Q9NPI5 230 aa6.62□□□□□ -1.35
CASC19-260ENST00000641828 BSDC1Q9NW68 430 aaPredicted RBP6.62□□□□□ -1.35
CASC19-260ENST00000641828 MSRB2Q9Y3D2 182 aa6.62□□□□□ -1.35
CASC19-260ENST00000641828 USP42Q9H9J4 1324 aaKnown RBP6.62□□□□□ -1.35
CASC19-260ENST00000641828 A0A1W2PQ27 194 aa6.62□□□□□ -1.35
CASC19-260ENST00000641828 A0A1W2PQ64 194 aa6.62□□□□□ -1.35
CASC19-260ENST00000641828 A0A1W2PQD8 194 aa6.62□□□□□ -1.35
CASC19-260ENST00000641828 KLHL33A6NCF5 533 aa6.62□□□□□ -1.35
CASC19-260ENST00000641828 HIP1O00291 1037 aa6.62□□□□□ -1.35
CASC19-260ENST00000641828 AXIN1O15169 862 aa6.62□□□□□ -1.35
CASC19-260ENST00000641828 DTNBO60941 627 aa6.62□□□□□ -1.35
CASC19-260ENST00000641828 SYF2O95926 243 aaKnown RBP6.62□□□□□ -1.35
CASC19-260ENST00000641828 SERPINC1P01008 464 aa6.62□□□□□ -1.35
CASC19-260ENST00000641828 BMP6P22004 513 aa6.62□□□□□ -1.35
CASC19-260ENST00000641828 RPS6KB1P23443 525 aa6.62□□□□□ -1.35
CASC19-260ENST00000641828 MRPL12P52815 198 aaKnown RBP6.62□□□□□ -1.35
CASC19-260ENST00000641828 SEPT6Q14141 434 aa6.62□□□□□ -1.35
CASC19-260ENST00000641828 DPCR1Q3MIW9 517 aa6.62□□□□□ -1.35
CASC19-260ENST00000641828 NAA16Q6N069 864 aaPredicted RBP6.62□□□□□ -1.35
CASC19-260ENST00000641828 B4GALNT4Q76KP1 1039 aa6.62□□□□□ -1.35
CASC19-260ENST00000641828 TEX11Q8IYF3 940 aa6.62□□□□□ -1.35
CASC19-260ENST00000641828 BSNDQ8WZ55 320 aa6.62□□□□□ -1.35
CASC19-260ENST00000641828 MRPS27Q92552 414 aaKnown RBP6.62□□□□□ -1.35
CASC19-260ENST00000641828 SMARCC1Q92922 1105 aaPredicted RBP6.62□□□□□ -1.35
CASC19-260ENST00000641828 BRF1Q92994 677 aa6.62□□□□□ -1.35
CASC19-260ENST00000641828 FAXDC2Q96IV6 333 aa6.62□□□□□ -1.35
CASC19-260ENST00000641828 PLEKHA4Q9H4M7 779 aa6.62□□□□□ -1.35
CASC19-260ENST00000641828 IGFLR1Q9H665 355 aa6.62□□□□□ -1.35
CASC19-260ENST00000641828 IL1RAPL2Q9NP60 686 aa6.62□□□□□ -1.35
CASC19-260ENST00000641828 ACTR10Q9NZ32 417 aa6.62□□□□□ -1.35
CASC19-260ENST00000641828 MCM8Q9UJA3 840 aa6.62□□□□□ -1.35
CASC19-260ENST00000641828 CYP8B1Q9UNU6 501 aa6.62□□□□□ -1.35
CASC19-260ENST00000641828 UTRNP46939 3433 aa6.62□□□□□ -1.35
CASC19-260ENST00000641828 QSER1Q2KHR3 1735 aa6.61□□□□□ -1.35
CASC19-260ENST00000641828 CILPO75339 1184 aa6.61□□□□□ -1.35
CASC19-260ENST00000641828 FSBPO95073 299 aa6.61□□□□□ -1.35
CASC19-260ENST00000641828 NME2P22392 152 aa6.61□□□□□ -1.35
CASC19-260ENST00000641828 FGFR3P22607 806 aa6.61□□□□□ -1.35
CASC19-260ENST00000641828 ME1P48163 572 aa6.61□□□□□ -1.35
CASC19-260ENST00000641828 CCT5P48643 541 aa6.61□□□□□ -1.35
CASC19-260ENST00000641828 DDR2Q16832 855 aa6.61□□□□□ -1.35
CASC19-260ENST00000641828 ZNF827Q17R98 1081 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms