RNA–Protein interactions for RNA: ENST00000640218.1

HNRNPU-226, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HNRNPU, Length 6,858 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-226ENST00000640218 PTPREP23469 700 aa15.99■□□□□ 0.15
HNRNPU-226ENST00000640218 OSBP2Q969R2 916 aa15.99■□□□□ 0.15
HNRNPU-226ENST00000640218 ZSWIM5Q9P217 1185 aa15.99■□□□□ 0.15
HNRNPU-226ENST00000640218 SH2B2O14492 632 aaPredicted RBP15.99■□□□□ 0.15
HNRNPU-226ENST00000640218 GCFC2P16383 781 aaKnown RBP15.99■□□□□ 0.15
HNRNPU-226ENST00000640218 TFAMQ00059 246 aaKnown RBP15.99■□□□□ 0.15
HNRNPU-226ENST00000640218 UBE2SQ16763 222 aa15.99■□□□□ 0.15
HNRNPU-226ENST00000640218 MIGA2Q7L4E1 593 aa15.99■□□□□ 0.15
HNRNPU-226ENST00000640218 METP08581 1390 aa15.99■□□□□ 0.15
HNRNPU-226ENST00000640218 KIF23Q02241 960 aaPredicted RBP15.99■□□□□ 0.15
HNRNPU-226ENST00000640218 KCTD16Q68DU8 428 aa15.99■□□□□ 0.15
HNRNPU-226ENST00000640218 BCAS4Q8TDM0 211 aa15.99■□□□□ 0.15
HNRNPU-226ENST00000640218 RUNDC3BQ96NL0 473 aa15.99■□□□□ 0.15
HNRNPU-226ENST00000640218 ZNF853P0CG23 659 aa15.99■□□□□ 0.15
HNRNPU-226ENST00000640218 MAN2A1Q16706 1144 aa15.99■□□□□ 0.15
HNRNPU-226ENST00000640218 C11orf57Q6ZUT1 292 aaPredicted RBP15.99■□□□□ 0.15
HNRNPU-226ENST00000640218 EEPD1Q7L9B9 569 aa15.99■□□□□ 0.15
HNRNPU-226ENST00000640218 OSBPL3Q9H4L5 887 aa15.99■□□□□ 0.15
HNRNPU-226ENST00000640218 LRFN2Q9ULH4 789 aa15.99■□□□□ 0.15
HNRNPU-226ENST00000640218 KRT3P12035 628 aa15.98■□□□□ 0.15
HNRNPU-226ENST00000640218 LMNB2Q03252 620 aa15.98■□□□□ 0.15
HNRNPU-226ENST00000640218 LLGL1Q15334 1064 aa15.98■□□□□ 0.15
HNRNPU-226ENST00000640218 AATKQ6ZMQ8 1374 aa15.98■□□□□ 0.15
HNRNPU-226ENST00000640218 RSPH3Q86UC2 560 aa15.98■□□□□ 0.15
HNRNPU-226ENST00000640218 TTC30BQ8N4P2 665 aa15.98■□□□□ 0.15
HNRNPU-226ENST00000640218 IGSF1Q8N6C5 1336 aa15.98■□□□□ 0.15
HNRNPU-226ENST00000640218 JPH2Q9BR39 696 aaPredicted RBP15.98■□□□□ 0.15
HNRNPU-226ENST00000640218 MAGED2Q9UNF1 606 aaPredicted RBP15.98■□□□□ 0.15
HNRNPU-226ENST00000640218 CDC25BP30305 580 aa15.98■□□□□ 0.15
HNRNPU-226ENST00000640218 PDE1BQ01064 536 aa15.98■□□□□ 0.15
HNRNPU-226ENST00000640218 SUPT20HL1Q3ZLR7 823 aa15.98■□□□□ 0.15
HNRNPU-226ENST00000640218 JADE1Q6IE81 842 aa15.98■□□□□ 0.15
HNRNPU-226ENST00000640218 SAMD9Q5K651 1589 aa15.98■□□□□ 0.15
HNRNPU-226ENST00000640218 RFC1P35251 1148 aaPredicted RBP15.98■□□□□ 0.15
HNRNPU-226ENST00000640218 MMEL1Q495T6 779 aa15.98■□□□□ 0.15
HNRNPU-226ENST00000640218 DALRD3Q5D0E6 543 aaKnown RBP15.98■□□□□ 0.15
HNRNPU-226ENST00000640218 FAM133AQ8N9E0 248 aa15.98■□□□□ 0.15
HNRNPU-226ENST00000640218 MAGI2Q86UL8 1455 aa15.98■□□□□ 0.15
HNRNPU-226ENST00000640218 GFPT2O94808 682 aa15.98■□□□□ 0.15
HNRNPU-226ENST00000640218 MTERF2Q49AM1 385 aa15.98■□□□□ 0.15
HNRNPU-226ENST00000640218 TMC4Q7Z404 712 aa15.98■□□□□ 0.15
HNRNPU-226ENST00000640218 GPBP1L1Q9HC44 474 aaPredicted RBP15.98■□□□□ 0.15
HNRNPU-226ENST00000640218 ZNF500O60304 480 aaPredicted RBP15.98■□□□□ 0.15
HNRNPU-226ENST00000640218 METTL23Q86XA0 190 aa15.98■□□□□ 0.15
HNRNPU-226ENST00000640218 C7orf31Q8N865 590 aa15.98■□□□□ 0.15
HNRNPU-226ENST00000640218 NLRP7Q8WX94 980 aa15.98■□□□□ 0.15
HNRNPU-226ENST00000640218 SLC38A10Q9HBR0 1119 aa15.98■□□□□ 0.15
HNRNPU-226ENST00000640218 UBE2TQ9NPD8 197 aaPredicted RBP15.98■□□□□ 0.15
HNRNPU-226ENST00000640218 USP17L3A6NCW0 530 aa15.98■□□□□ 0.15
HNRNPU-226ENST00000640218 USP17L4A6NCW7 530 aa15.98■□□□□ 0.15
HNRNPU-226ENST00000640218 IRX4P78413 519 aa15.98■□□□□ 0.15
HNRNPU-226ENST00000640218 R3HDM1Q15032 1099 aaKnown RBP15.98■□□□□ 0.15
HNRNPU-226ENST00000640218 USP17L1Q7RTZ2 530 aa15.98■□□□□ 0.15
HNRNPU-226ENST00000640218 CCNYQ8ND76 341 aa15.98■□□□□ 0.15
HNRNPU-226ENST00000640218 PPP1R16BQ96T49 567 aa15.98■□□□□ 0.15
HNRNPU-226ENST00000640218 PDE11AQ9HCR9 933 aa15.98■□□□□ 0.15
HNRNPU-226ENST00000640218 GCNT4Q9P109 453 aa15.98■□□□□ 0.15
HNRNPU-226ENST00000640218 STK17AQ9UEE5 414 aa15.98■□□□□ 0.15
HNRNPU-226ENST00000640218 CDC23Q9UJX2 597 aa15.98■□□□□ 0.15
HNRNPU-226ENST00000640218 ZBBXA8MT70 800 aa15.97■□□□□ 0.15
HNRNPU-226ENST00000640218 FKBP3Q00688 224 aaKnown RBP15.97■□□□□ 0.15
HNRNPU-226ENST00000640218 TRIM11Q96F44 468 aa15.97■□□□□ 0.15
HNRNPU-226ENST00000640218 NXF1Q9UBU9 619 aaKnown RBP15.97■□□□□ 0.15
HNRNPU-226ENST00000640218 OSTNP61366 133 aa15.97■□□□□ 0.15
HNRNPU-226ENST00000640218 CACTINQ8WUQ7 758 aaKnown RBP15.97■□□□□ 0.15
HNRNPU-226ENST00000640218 TMEM206Q9H813 350 aa15.97■□□□□ 0.15
HNRNPU-226ENST00000640218 DYNLT1P63172 113 aa15.97■□□□□ 0.15
HNRNPU-226ENST00000640218 MECOMQ03112 1051 aa15.97■□□□□ 0.15
HNRNPU-226ENST00000640218 DBN1Q16643 649 aa15.97■□□□□ 0.15
HNRNPU-226ENST00000640218 TRIM68Q6AZZ1 485 aa15.97■□□□□ 0.15
HNRNPU-226ENST00000640218 TDRD7Q8NHU6 1098 aaKnown RBP15.97■□□□□ 0.15
HNRNPU-226ENST00000640218 CPSF2Q9P2I0 782 aaKnown RBP15.97■□□□□ 0.15
HNRNPU-226ENST00000640218 ZMYND10O75800 440 aa15.97■□□□□ 0.15
HNRNPU-226ENST00000640218 SESN3P58005 492 aa15.97■□□□□ 0.15
HNRNPU-226ENST00000640218 SNAP25P60880 206 aa15.97■□□□□ 0.15
HNRNPU-226ENST00000640218 PI4KBQ9UBF8 816 aa15.97■□□□□ 0.15
HNRNPU-226ENST00000640218 RIPOR2Q9Y4F9 1068 aa15.97■□□□□ 0.15
HNRNPU-226ENST00000640218 MYO5CQ9NQX4 1742 aa15.97■□□□□ 0.15
HNRNPU-226ENST00000640218 CXCR5P32302 372 aa15.97■□□□□ 0.15
HNRNPU-226ENST00000640218 SGO2Q562F6 1265 aa15.97■□□□□ 0.15
HNRNPU-226ENST00000640218 PHLDB3Q6NSJ2 640 aa15.97■□□□□ 0.15
HNRNPU-226ENST00000640218 RYBPQ8N488 228 aaPredicted RBP15.97■□□□□ 0.15
HNRNPU-226ENST00000640218 CFAP61Q8NHU2 1237 aa15.97■□□□□ 0.15
HNRNPU-226ENST00000640218 WDR17Q8IZU2 1322 aa15.96■□□□□ 0.15
HNRNPU-226ENST00000640218 ACTN1P12814 892 aa15.96■□□□□ 0.15
HNRNPU-226ENST00000640218 MCUQ8NE86 351 aa15.96■□□□□ 0.15
HNRNPU-226ENST00000640218 IFNAR2P48551 515 aa15.96■□□□□ 0.15
HNRNPU-226ENST00000640218 EN1Q05925 392 aaPredicted RBP15.96■□□□□ 0.15
HNRNPU-226ENST00000640218 CCDC93Q567U6 631 aa15.96■□□□□ 0.15
HNRNPU-226ENST00000640218 LINC00301Q8NCQ3 95 aa15.96■□□□□ 0.15
HNRNPU-226ENST00000640218 EPB41L5Q9HCM4 733 aa15.96■□□□□ 0.15
HNRNPU-226ENST00000640218 ATG3Q9NT62 314 aa15.96■□□□□ 0.15
HNRNPU-226ENST00000640218 RNF181Q9P0P0 153 aa15.96■□□□□ 0.15
HNRNPU-226ENST00000640218 GOLGA8CPA6NN73 597 aa15.96■□□□□ 0.15
HNRNPU-226ENST00000640218 RNASELQ05823 741 aaKnown RBP15.96■□□□□ 0.15
HNRNPU-226ENST00000640218 DHX36Q9H2U1 1008 aaKnown RBP15.96■□□□□ 0.15
HNRNPU-226ENST00000640218 IRAK4Q9NWZ3 460 aa15.96■□□□□ 0.15
HNRNPU-226ENST00000640218 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.96■□□□□ 0.15
HNRNPU-226ENST00000640218 SLFN14P0C7P3 912 aa15.96■□□□□ 0.15
HNRNPU-226ENST00000640218 ADCY1Q08828 1119 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms