RNA–Protein interactions for RNA: ENST00000639953.1

ATM-229, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5 BASIC

Gene ATM, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-229ENST00000639953 CHRNA5P30532 468 aa7.48□□□□□ -1.21
ATM-229ENST00000639953 BRCA1P38398 1863 aaKnown RBP7.48□□□□□ -1.21
ATM-229ENST00000639953 NUCB1Q02818 461 aa7.48□□□□□ -1.21
ATM-229ENST00000639953 CCDC30Q5VVM6 783 aa7.48□□□□□ -1.21
ATM-229ENST00000639953 PRR5LQ6MZQ0 368 aa7.48□□□□□ -1.21
ATM-229ENST00000639953 CLEC4GQ6UXB4 293 aa7.48□□□□□ -1.21
ATM-229ENST00000639953 TRAIPQ9BWF2 469 aa7.48□□□□□ -1.21
ATM-229ENST00000639953 KCNK12Q9HB15 430 aa7.48□□□□□ -1.21
ATM-229ENST00000639953 HYPKQ9NX55 129 aa7.48□□□□□ -1.21
ATM-229ENST00000639953 DDX19BQ9UMR2 479 aa7.48□□□□□ -1.21
ATM-229ENST00000639953 TLR6Q9Y2C9 796 aa7.48□□□□□ -1.21
ATM-229ENST00000639953 ZNF652Q9Y2D9 606 aa7.48□□□□□ -1.21
ATM-229ENST00000639953 NOP58Q9Y2X3 529 aaKnown RBP7.48□□□□□ -1.21
ATM-229ENST00000639953 TNRC6CQ9HCJ0 1690 aaKnown RBP7.47□□□□□ -1.21
ATM-229ENST00000639953 ATP10DQ9P241 1426 aa7.47□□□□□ -1.21
ATM-229ENST00000639953 NPHP1O15259 732 aa7.47□□□□□ -1.21
ATM-229ENST00000639953 IPO8O15397 1037 aaKnown RBP7.47□□□□□ -1.21
ATM-229ENST00000639953 SMARCA5O60264 1052 aaPredicted RBP7.47□□□□□ -1.21
ATM-229ENST00000639953 GLI1P08151 1106 aa7.47□□□□□ -1.21
ATM-229ENST00000639953 KCNA3P22001 575 aa7.47□□□□□ -1.21
ATM-229ENST00000639953 GDNFP39905 211 aa7.47□□□□□ -1.21
ATM-229ENST00000639953 TMEM67Q5HYA8 995 aa7.47□□□□□ -1.21
ATM-229ENST00000639953 SUSD4Q5VX71 490 aa7.47□□□□□ -1.21
ATM-229ENST00000639953 NBPF5PQ86XG9 351 aaPredicted RBP7.47□□□□□ -1.21
ATM-229ENST00000639953 ZNF34Q8IZ26 560 aa7.47□□□□□ -1.21
ATM-229ENST00000639953 SYNE4Q8N205 404 aa7.47□□□□□ -1.21
ATM-229ENST00000639953 CNBD1Q8NA66 436 aa7.47□□□□□ -1.21
ATM-229ENST00000639953 KRTAP4-7Q9BYR0 210 aa7.47□□□□□ -1.21
ATM-229ENST00000639953 LNPKQ9C0E8 428 aa7.47□□□□□ -1.21
ATM-229ENST00000639953 MIR1-1HGQ9H1L0 117 aa7.47□□□□□ -1.21
ATM-229ENST00000639953 KIF16BQ96L93 1317 aa7.47□□□□□ -1.21
ATM-229ENST00000639953 DLEC1Q9Y238 1755 aa7.46□□□□□ -1.21
ATM-229ENST00000639953 UPK3BL1B0FP48 263 aa7.46□□□□□ -1.22
ATM-229ENST00000639953 UPK3BL2E5RIL1 263 aa7.46□□□□□ -1.22
ATM-229ENST00000639953 NTSR2O95665 410 aa7.46□□□□□ -1.22
ATM-229ENST00000639953 ESR1P03372 595 aa7.46□□□□□ -1.22
ATM-229ENST00000639953 ERVFC1P60507 584 aa7.46□□□□□ -1.22
ATM-229ENST00000639953 TCIRG1Q13488 830 aa7.46□□□□□ -1.22
ATM-229ENST00000639953 GPR162Q16538 588 aa7.46□□□□□ -1.22
ATM-229ENST00000639953 RALGPS1Q5JS13 557 aa7.46□□□□□ -1.22
ATM-229ENST00000639953 LCE4AQ5TA78 99 aa7.46□□□□□ -1.22
ATM-229ENST00000639953 MPZL3Q6UWV2 235 aa7.46□□□□□ -1.22
ATM-229ENST00000639953 CILP2Q8IUL8 1156 aa7.46□□□□□ -1.22
ATM-229ENST00000639953 MRPL41Q8IXM3 137 aaKnown RBP7.46□□□□□ -1.22
ATM-229ENST00000639953 PLBD2Q8NHP8 589 aa7.46□□□□□ -1.22
ATM-229ENST00000639953 ACSF2Q96CM8 615 aaPredicted RBP7.46□□□□□ -1.22
ATM-229ENST00000639953 TMEM87BQ96K49 555 aa7.46□□□□□ -1.22
ATM-229ENST00000639953 Q96M66 194 aa7.46□□□□□ -1.22
ATM-229ENST00000639953 MYD88Q99836 296 aa7.46□□□□□ -1.22
ATM-229ENST00000639953 STK31Q9BXU1 1019 aa7.46□□□□□ -1.22
ATM-229ENST00000639953 CACNA1FO60840 1977 aa7.46□□□□□ -1.22
ATM-229ENST00000639953 LAMB2P55268 1798 aa7.46□□□□□ -1.22
ATM-229ENST00000639953 ADCY9O60503 1353 aa7.46□□□□□ -1.22
ATM-229ENST00000639953 ABCC12Q96J65 1359 aa7.46□□□□□ -1.22
ATM-229ENST00000639953 DNAJC25-GNG10A0A024R161 153 aa7.45□□□□□ -1.22
ATM-229ENST00000639953 PI4KAP2A4QPH2 592 aa7.45□□□□□ -1.22
ATM-229ENST00000639953 TGFB2P61812 414 aa7.45□□□□□ -1.22
ATM-229ENST00000639953 ST5P78524 1137 aa7.45□□□□□ -1.22
ATM-229ENST00000639953 FBLN7Q53RD9 439 aa7.45□□□□□ -1.22
ATM-229ENST00000639953 EAPPQ56P03 285 aaPredicted RBP7.45□□□□□ -1.22
ATM-229ENST00000639953 SLC6A19Q695T7 634 aa7.45□□□□□ -1.22
ATM-229ENST00000639953 CEP85Q6P2H3 762 aa7.45□□□□□ -1.22
ATM-229ENST00000639953 SPOCD1Q6ZMY3 1216 aa7.45□□□□□ -1.22
ATM-229ENST00000639953 THAP5Q7Z6K1 395 aa7.45□□□□□ -1.22
ATM-229ENST00000639953 TTC6Q86TZ1 520 aa7.45□□□□□ -1.22
ATM-229ENST00000639953 NLRP10Q86W26 655 aa7.45□□□□□ -1.22
ATM-229ENST00000639953 C2CD5Q86YS7 1000 aa7.45□□□□□ -1.22
ATM-229ENST00000639953 MCATQ8IVS2 390 aaKnown RBP7.45□□□□□ -1.22
ATM-229ENST00000639953 PI4KAP1Q8N8J0 262 aa7.45□□□□□ -1.22
ATM-229ENST00000639953 ALPK1Q96QP1 1244 aa7.45□□□□□ -1.22
ATM-229ENST00000639953 API5Q9BZZ5 524 aaKnown RBP7.45□□□□□ -1.22
ATM-229ENST00000639953 SLAMF8Q9P0V8 285 aa7.45□□□□□ -1.22
ATM-229ENST00000639953 PARP2Q9UGN5 583 aa7.45□□□□□ -1.22
ATM-229ENST00000639953 MAP3K2Q9Y2U5 619 aa7.45□□□□□ -1.22
ATM-229ENST00000639953 CORINQ9Y5Q5 1042 aa7.45□□□□□ -1.22
ATM-229ENST00000639953 DDX60Q8IY21 1712 aaKnown RBP7.44□□□□□ -1.22
ATM-229ENST00000639953 ARFGEF1Q9Y6D6 1849 aa7.44□□□□□ -1.22
ATM-229ENST00000639953 GSPT1P15170 499 aaKnown RBP7.44□□□□□ -1.22
ATM-229ENST00000639953 CYP7A1P22680 504 aa7.44□□□□□ -1.22
ATM-229ENST00000639953 ANKRD45Q5TZF3 282 aa7.44□□□□□ -1.22
ATM-229ENST00000639953 ZNF746Q6NUN9 644 aaPredicted RBP7.44□□□□□ -1.22
ATM-229ENST00000639953 SYDE1Q6ZW31 735 aaPredicted RBP7.44□□□□□ -1.22
ATM-229ENST00000639953 PPP1R42Q7Z4L9 355 aa7.44□□□□□ -1.22
ATM-229ENST00000639953 CHD1LQ86WJ1 897 aa7.44□□□□□ -1.22
ATM-229ENST00000639953 ANKRD44Q8N8A2 993 aa7.44□□□□□ -1.22
ATM-229ENST00000639953 ZNF622Q969S3 477 aaKnown RBP eCLIP7.44□□□□□ -1.225e-7■□□□□ 9.2
ATM-229ENST00000639953 ISCA1Q9BUE6 129 aa7.44□□□□□ -1.22
ATM-229ENST00000639953 BRIP1Q9BX63 1249 aa7.44□□□□□ -1.22
ATM-229ENST00000639953 DUSP15Q9H1R2 295 aaPredicted RBP7.44□□□□□ -1.22
ATM-229ENST00000639953 DCTPP1Q9H773 170 aa7.44□□□□□ -1.22
ATM-229ENST00000639953 TACC3Q9Y6A5 838 aa7.44□□□□□ -1.22
ATM-229ENST00000639953 TAF1P21675 1872 aa7.44□□□□□ -1.22
ATM-229ENST00000639953 SLX4Q8IY92 1834 aa7.43□□□□□ -1.22
ATM-229ENST00000639953 H0YIN7 160 aa7.43□□□□□ -1.22
ATM-229ENST00000639953 DDX58O95786 925 aaKnown RBP7.43□□□□□ -1.22
ATM-229ENST00000639953 IGKV5-2P06315 115 aa7.43□□□□□ -1.22
ATM-229ENST00000639953 CTSHP09668 335 aa7.43□□□□□ -1.22
ATM-229ENST00000639953 KIR3DL1P43629 444 aa7.43□□□□□ -1.22
ATM-229ENST00000639953 RPL6Q02878 288 aaKnown RBP7.43□□□□□ -1.22
ATM-229ENST00000639953 TSNAXIP1Q2TAA8 658 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms