RNA–Protein interactions for RNA: ENST00000639715.1

SCARB2-218, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,355 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-218ENST00000639715 ENC1O14682 589 aa6.2□□□□□ -1.42
SCARB2-218ENST00000639715 TBCAO75347 108 aaKnown RBP6.2□□□□□ -1.42
SCARB2-218ENST00000639715 MYZAPP0CAP1 466 aa6.2□□□□□ -1.42
SCARB2-218ENST00000639715 PSMD7P51665 324 aa6.2□□□□□ -1.42
SCARB2-218ENST00000639715 MECOMQ03112 1051 aa6.2□□□□□ -1.42
SCARB2-218ENST00000639715 PTGDRQ13258 359 aa6.2□□□□□ -1.42
SCARB2-218ENST00000639715 TMEM154Q6P9G4 183 aa6.2□□□□□ -1.42
SCARB2-218ENST00000639715 MSANTD4Q8NCY6 345 aa6.2□□□□□ -1.42
SCARB2-218ENST00000639715 FAM81BQ96LP2 452 aa6.2□□□□□ -1.42
SCARB2-218ENST00000639715 CUEDC2Q9H467 287 aa6.2□□□□□ -1.42
SCARB2-218ENST00000639715 DLGAP2Q9P1A6 1054 aa6.2□□□□□ -1.42
SCARB2-218ENST00000639715 KCNJ18B7U540 433 aa6.2□□□□□ -1.42
SCARB2-218ENST00000639715 RTN2O75298 545 aa6.2□□□□□ -1.42
SCARB2-218ENST00000639715 VIL1P09327 827 aaKnown RBP6.2□□□□□ -1.42
SCARB2-218ENST00000639715 VCAM1P19320 739 aa6.2□□□□□ -1.42
SCARB2-218ENST00000639715 HDLBPQ00341 1268 aaKnown RBP6.2□□□□□ -1.42
SCARB2-218ENST00000639715 MORC3Q14149 939 aa6.2□□□□□ -1.42
SCARB2-218ENST00000639715 KCNJ12Q14500 433 aa6.2□□□□□ -1.42
SCARB2-218ENST00000639715 SLC4A8Q2Y0W8 1093 aa6.2□□□□□ -1.42
SCARB2-218ENST00000639715 DHX40Q8IX18 779 aaKnown RBP6.2□□□□□ -1.42
SCARB2-218ENST00000639715 SYMPKQ92797 1274 aaKnown RBP6.2□□□□□ -1.42
SCARB2-218ENST00000639715 PANX2Q96RD6 677 aa6.2□□□□□ -1.42
SCARB2-218ENST00000639715 SLF1Q9BQI6 1058 aa6.2□□□□□ -1.42
SCARB2-218ENST00000639715 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.2□□□□□ -1.42
SCARB2-218ENST00000639715 SEPT11Q9NVA2 429 aaKnown RBP6.2□□□□□ -1.42
SCARB2-218ENST00000639715 TNS1Q9HBL0 1735 aaKnown RBP6.2□□□□□ -1.42
SCARB2-218ENST00000639715 GMNCA6NCL1 334 aa6.2□□□□□ -1.42
SCARB2-218ENST00000639715 ALDH3A1P30838 453 aa6.2□□□□□ -1.42
SCARB2-218ENST00000639715 HOXA7P31268 230 aaPredicted RBP6.2□□□□□ -1.42
SCARB2-218ENST00000639715 MRPS35P82673 323 aaKnown RBP6.2□□□□□ -1.42
SCARB2-218ENST00000639715 RASGRF1Q13972 1273 aa6.2□□□□□ -1.42
SCARB2-218ENST00000639715 VWA3BQ502W6 1294 aa6.2□□□□□ -1.42
SCARB2-218ENST00000639715 ALS2CLQ60I27 953 aa6.2□□□□□ -1.42
SCARB2-218ENST00000639715 MAB21L3Q8N8X9 362 aa6.2□□□□□ -1.42
SCARB2-218ENST00000639715 NOA1Q8NC60 698 aaKnown RBP6.2□□□□□ -1.42
SCARB2-218ENST00000639715 MORC4Q8TE76 937 aa6.2□□□□□ -1.42
SCARB2-218ENST00000639715 SDR42E1Q8WUS8 393 aa6.2□□□□□ -1.42
SCARB2-218ENST00000639715 JAKMIP2Q96AA8 810 aa6.2□□□□□ -1.42
SCARB2-218ENST00000639715 UBA5Q9GZZ9 404 aa6.2□□□□□ -1.42
SCARB2-218ENST00000639715 RAB21Q9UL25 225 aa6.2□□□□□ -1.42
SCARB2-218ENST00000639715 INTUQ9ULD6 942 aa6.2□□□□□ -1.42
SCARB2-218ENST00000639715 CHMP2BQ9UQN3 213 aa6.2□□□□□ -1.42
SCARB2-218ENST00000639715 NWD2Q9ULI1 1742 aa6.2□□□□□ -1.42
SCARB2-218ENST00000639715 TMCC1O94876 653 aa6.2□□□□□ -1.42
SCARB2-218ENST00000639715 UPP2O95045 317 aa6.2□□□□□ -1.42
SCARB2-218ENST00000639715 ATP6V1G2O95670 118 aa6.2□□□□□ -1.42
SCARB2-218ENST00000639715 CSF1RP07333 972 aa6.2□□□□□ -1.42
SCARB2-218ENST00000639715 GYG1P46976 350 aa6.2□□□□□ -1.42
SCARB2-218ENST00000639715 TNNI2P48788 182 aa6.2□□□□□ -1.42
SCARB2-218ENST00000639715 GUCY2FP51841 1108 aa6.2□□□□□ -1.42
SCARB2-218ENST00000639715 KLC1Q07866 573 aa6.2□□□□□ -1.42
SCARB2-218ENST00000639715 PDE1CQ14123 709 aaPredicted RBP6.2□□□□□ -1.42
SCARB2-218ENST00000639715 ZNF827Q17R98 1081 aa6.2□□□□□ -1.42
SCARB2-218ENST00000639715 CABP7Q86V35 215 aa6.2□□□□□ -1.42
SCARB2-218ENST00000639715 TEX9Q8N6V9 391 aa6.2□□□□□ -1.42
SCARB2-218ENST00000639715 HIC2Q96JB3 615 aa6.2□□□□□ -1.42
SCARB2-218ENST00000639715 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.2□□□□□ -1.42
SCARB2-218ENST00000639715 STK24Q9Y6E0 443 aa6.2□□□□□ -1.42
SCARB2-218ENST00000639715 LOC102724428A0A0B4J2F2 783 aa6.19□□□□□ -1.42
SCARB2-218ENST00000639715 BACH1O14867 736 aa6.19□□□□□ -1.42
SCARB2-218ENST00000639715 ATP2A2P16615 1042 aaKnown RBP6.19□□□□□ -1.42
SCARB2-218ENST00000639715 RPL13P26373 211 aaKnown RBP6.19□□□□□ -1.42
SCARB2-218ENST00000639715 EEF1GP26641 437 aaKnown RBP6.19□□□□□ -1.42
SCARB2-218ENST00000639715 USP14P54578 494 aa6.19□□□□□ -1.42
SCARB2-218ENST00000639715 SIK1P57059 783 aa6.19□□□□□ -1.42
SCARB2-218ENST00000639715 PAK2Q13177 524 aa6.19□□□□□ -1.42
SCARB2-218ENST00000639715 ARL6IP4Q66PJ3 421 aaKnown RBP6.19□□□□□ -1.42
SCARB2-218ENST00000639715 C8orf74Q6P047 294 aa6.19□□□□□ -1.42
SCARB2-218ENST00000639715 MON2Q7Z3U7 1717 aa6.19□□□□□ -1.42
SCARB2-218ENST00000639715 TBC1D10CQ8IV04 446 aa6.19□□□□□ -1.42
SCARB2-218ENST00000639715 CMTR1Q8N1G2 835 aaKnown RBP6.19□□□□□ -1.42
SCARB2-218ENST00000639715 RETREG2Q8NC44 543 aa6.19□□□□□ -1.42
SCARB2-218ENST00000639715 PNMA1Q8ND90 353 aa6.19□□□□□ -1.42
SCARB2-218ENST00000639715 AIFM3Q96NN9 605 aa6.19□□□□□ -1.42
SCARB2-218ENST00000639715 YIPF2Q9BWQ6 316 aa6.19□□□□□ -1.42
SCARB2-218ENST00000639715 LRWD1Q9UFC0 647 aa6.19□□□□□ -1.42
SCARB2-218ENST00000639715 MAPK8IP1Q9UQF2 711 aa6.19□□□□□ -1.42
SCARB2-218ENST00000639715 CPDO75976 1380 aa6.19□□□□□ -1.42
SCARB2-218ENST00000639715 COL15A1P39059 1388 aa6.19□□□□□ -1.42
SCARB2-218ENST00000639715 TLDC2A0PJX2 215 aa6.19□□□□□ -1.42
SCARB2-218ENST00000639715 SPDYE3A6NKU9 549 aa6.19□□□□□ -1.42
SCARB2-218ENST00000639715 LSM1O15116 133 aaKnown RBP6.19□□□□□ -1.42
SCARB2-218ENST00000639715 SYF2O95926 243 aaKnown RBP6.19□□□□□ -1.42
SCARB2-218ENST00000639715 RPN1P04843 607 aaKnown RBP6.19□□□□□ -1.42
SCARB2-218ENST00000639715 CETN2P41208 172 aa6.19□□□□□ -1.42
SCARB2-218ENST00000639715 COPB1P53618 953 aaKnown RBP6.19□□□□□ -1.42
SCARB2-218ENST00000639715 COG7P83436 770 aa6.19□□□□□ -1.42
SCARB2-218ENST00000639715 RUFY4Q6ZNE9 571 aa6.19□□□□□ -1.42
SCARB2-218ENST00000639715 LCA5Q86VQ0 697 aa6.19□□□□□ -1.42
SCARB2-218ENST00000639715 MAP7D3Q8IWC1 876 aa6.19□□□□□ -1.42
SCARB2-218ENST00000639715 LCORLQ8N3X6 602 aa6.19□□□□□ -1.42
SCARB2-218ENST00000639715 FBXL16Q8N461 479 aa6.19□□□□□ -1.42
SCARB2-218ENST00000639715 ENGASEQ8NFI3 743 aa6.19□□□□□ -1.42
SCARB2-218ENST00000639715 PLIN2Q99541 437 aa6.19□□□□□ -1.42
SCARB2-218ENST00000639715 BRIP1Q9BX63 1249 aa6.19□□□□□ -1.42
SCARB2-218ENST00000639715 ZC3H12CQ9C0D7 883 aaKnown RBP6.19□□□□□ -1.42
SCARB2-218ENST00000639715 BLZF1Q9H2G9 400 aa6.19□□□□□ -1.42
SCARB2-218ENST00000639715 KCND1Q9NSA2 647 aa6.19□□□□□ -1.42
SCARB2-218ENST00000639715 UTP6Q9NYH9 597 aaKnown RBP6.19□□□□□ -1.42
SCARB2-218ENST00000639715 TSKSQ9UJT2 592 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms