RNA–Protein interactions for RNA: ENST00000639695.1

RFC1-217, Transcript of replication factor C subunit 1, humanhuman

TSL 5 BASIC

Gene RFC1, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-217ENST00000639695 CCSAPQ6IQ19 270 aaPredicted RBP8.44□□□□□ -1.06
RFC1-217ENST00000639695 KIF18BQ86Y91 864 aa8.44□□□□□ -1.06
RFC1-217ENST00000639695 PASD1Q8IV76 773 aa8.44□□□□□ -1.06
RFC1-217ENST00000639695 MORC4Q8TE76 937 aa8.44□□□□□ -1.06
RFC1-217ENST00000639695 ZCCHC4Q9H5U6 513 aa8.44□□□□□ -1.06
RFC1-217ENST00000639695 KCNH3Q9ULD8 1083 aa8.44□□□□□ -1.06
RFC1-217ENST00000639695 CNOT6Q9ULM6 557 aaKnown RBP8.44□□□□□ -1.06
RFC1-217ENST00000639695 GPR55Q9Y2T6 319 aaPredicted RBP8.44□□□□□ -1.06
RFC1-217ENST00000639695 TEX51A0A1B0GUA7 166 aa8.43□□□□□ -1.06
RFC1-217ENST00000639695 TRIM13O60858 407 aa8.43□□□□□ -1.06
RFC1-217ENST00000639695 CAND2O75155 1236 aa8.43□□□□□ -1.06
RFC1-217ENST00000639695 PYGMP11217 842 aa8.43□□□□□ -1.06
RFC1-217ENST00000639695 RAB27AP51159 221 aa8.43□□□□□ -1.06
RFC1-217ENST00000639695 SLC35F1Q5T1Q4 408 aa8.43□□□□□ -1.06
RFC1-217ENST00000639695 PIK3R6Q5UE93 754 aa8.43□□□□□ -1.06
RFC1-217ENST00000639695 CWF19L1Q69YN2 538 aaKnown RBP8.43□□□□□ -1.06
RFC1-217ENST00000639695 STYK1Q6J9G0 422 aa8.43□□□□□ -1.06
RFC1-217ENST00000639695 ZCCHC8Q6NZY4 707 aaKnown RBP8.43□□□□□ -1.06
RFC1-217ENST00000639695 CHPFQ8IZ52 775 aa8.43□□□□□ -1.06
RFC1-217ENST00000639695 PANK1Q8TE04 598 aa8.43□□□□□ -1.06
RFC1-217ENST00000639695 LINC01599Q8WXQ3 324 aa8.43□□□□□ -1.06
RFC1-217ENST00000639695 SMAD5Q99717 465 aaKnown RBP8.43□□□□□ -1.06
RFC1-217ENST00000639695 AASDHPPTQ9NRN7 309 aa8.43□□□□□ -1.06
RFC1-217ENST00000639695 GFOD1Q9NXC2 390 aa8.43□□□□□ -1.06
RFC1-217ENST00000639695 JAG2Q9Y219 1238 aa8.43□□□□□ -1.06
RFC1-217ENST00000639695 ZNF281Q9Y2X9 895 aa8.43□□□□□ -1.06
RFC1-217ENST00000639695 KCTD3Q9Y597 815 aa8.43□□□□□ -1.06
RFC1-217ENST00000639695 SHTN1A0MZ66 631 aa8.42□□□□□ -1.06
RFC1-217ENST00000639695 VAMP4O75379 141 aa8.42□□□□□ -1.06
RFC1-217ENST00000639695 TMPRSS15P98073 1019 aa8.42□□□□□ -1.06
RFC1-217ENST00000639695 SEPT7Q16181 437 aaKnown RBP8.42□□□□□ -1.06
RFC1-217ENST00000639695 SIRT2Q8IXJ6 389 aa8.42□□□□□ -1.06
RFC1-217ENST00000639695 ZFYVE21Q9BQ24 234 aa8.42□□□□□ -1.06
RFC1-217ENST00000639695 ZIM2Q9NZV7 527 aa8.42□□□□□ -1.06
RFC1-217ENST00000639695 SAMD15Q9P1V8 674 aa8.42□□□□□ -1.06
RFC1-217ENST00000639695 APOBEC2Q9Y235 224 aaKnown RBP8.42□□□□□ -1.06
RFC1-217ENST00000639695 TRAF6Q9Y4K3 522 aa8.42□□□□□ -1.06
RFC1-217ENST00000639695 PCDHA9Q9Y5H5 950 aa8.42□□□□□ -1.06
RFC1-217ENST00000639695 PLIN1O60240 522 aa8.41□□□□□ -1.06
RFC1-217ENST00000639695 FOXD2O60548 495 aaPredicted RBP8.41□□□□□ -1.06
RFC1-217ENST00000639695 NOP2P46087 812 aaKnown RBP8.41□□□□□ -1.06
RFC1-217ENST00000639695 HLTFQ14527 1009 aaKnown RBP eCLIP8.41□□□□□ -1.069e-8■□□□□ 9.5
RFC1-217ENST00000639695 DPY19L1Q2PZI1 675 aa8.41□□□□□ -1.06
RFC1-217ENST00000639695 TMEM132EQ6IEE7 984 aa8.41□□□□□ -1.06
RFC1-217ENST00000639695 RSPO2Q6UXX9 243 aaPredicted RBP8.41□□□□□ -1.06
RFC1-217ENST00000639695 LHFPL2Q6ZUX7 228 aa8.41□□□□□ -1.06
RFC1-217ENST00000639695 MTDHQ86UE4 582 aaKnown RBP8.41□□□□□ -1.06
RFC1-217ENST00000639695 ZBTB46Q86UZ6 589 aa8.41□□□□□ -1.06
RFC1-217ENST00000639695 MYO1HQ8N1T3 1032 aa8.41□□□□□ -1.06
RFC1-217ENST00000639695 MARCH10Q8NA82 808 aaPredicted RBP8.41□□□□□ -1.06
RFC1-217ENST00000639695 CHMP4CQ96CF2 233 aa8.41□□□□□ -1.06
RFC1-217ENST00000639695 ORAI3Q9BRQ5 295 aa8.41□□□□□ -1.06
RFC1-217ENST00000639695 CHST7Q9NS84 486 aa8.41□□□□□ -1.06
RFC1-217ENST00000639695 NEMP1O14524 444 aa8.4□□□□□ -1.06
RFC1-217ENST00000639695 AKAP10O43572 662 aa8.4□□□□□ -1.06
RFC1-217ENST00000639695 SIGLEC6O43699 453 aa8.4□□□□□ -1.06
RFC1-217ENST00000639695 KRT18P05783 430 aaKnown RBP8.4□□□□□ -1.06
RFC1-217ENST00000639695 GSNP06396 782 aa8.4□□□□□ -1.06
RFC1-217ENST00000639695 BPIP17213 487 aa8.4□□□□□ -1.06
RFC1-217ENST00000639695 KRTAP10-2P60368 255 aa8.4□□□□□ -1.06
RFC1-217ENST00000639695 SNW1Q13573 536 aaKnown RBP8.4□□□□□ -1.06
RFC1-217ENST00000639695 PRSS53Q2L4Q9 553 aa8.4□□□□□ -1.06
RFC1-217ENST00000639695 EXOC8Q8IYI6 725 aa8.4□□□□□ -1.06
RFC1-217ENST00000639695 IFNL3Q8IZI9 196 aa8.4□□□□□ -1.06
RFC1-217ENST00000639695 C1orf159Q96HA4 380 aa8.4□□□□□ -1.06
RFC1-217ENST00000639695 CCDC8Q9H0W5 538 aaPredicted RBP8.4□□□□□ -1.06
RFC1-217ENST00000639695 ZKSCAN5Q9Y2L8 839 aa8.4□□□□□ -1.06
RFC1-217ENST00000639695 GOLGA6CA6NDK9 693 aa8.39□□□□□ -1.07
RFC1-217ENST00000639695 GOLGA6BA6NDN3 693 aa8.39□□□□□ -1.07
RFC1-217ENST00000639695 SCGB1D2O95969 90 aa8.39□□□□□ -1.07
RFC1-217ENST00000639695 GOLGA6DP0CG33 693 aa8.39□□□□□ -1.07
RFC1-217ENST00000639695 ATF3P18847 181 aa8.39□□□□□ -1.07
RFC1-217ENST00000639695 GNALP38405 381 aa8.39□□□□□ -1.07
RFC1-217ENST00000639695 IL2P60568 153 aa8.39□□□□□ -1.07
RFC1-217ENST00000639695 SCRN1Q12765 414 aa8.39□□□□□ -1.07
RFC1-217ENST00000639695 FAPQ12884 760 aa8.39□□□□□ -1.07
RFC1-217ENST00000639695 BIRC2Q13490 618 aa8.39□□□□□ -1.07
RFC1-217ENST00000639695 SYDE2Q5VT97 1194 aa8.39□□□□□ -1.07
RFC1-217ENST00000639695 NLRX1Q86UT6 975 aa8.39□□□□□ -1.07
RFC1-217ENST00000639695 ZC3H7AQ8IWR0 971 aaKnown RBP8.39□□□□□ -1.07
RFC1-217ENST00000639695 PPIL6Q8IXY8 311 aa8.39□□□□□ -1.07
RFC1-217ENST00000639695 CNTD1Q8N815 330 aa8.39□□□□□ -1.07
RFC1-217ENST00000639695 ANKS4BQ8N8V4 417 aa8.39□□□□□ -1.07
RFC1-217ENST00000639695 YIPF4Q9BSR8 244 aa8.39□□□□□ -1.07
RFC1-217ENST00000639695 CABP5Q9NP86 173 aa8.39□□□□□ -1.07
RFC1-217ENST00000639695 GOLGA6AQ9NYA3 693 aa8.39□□□□□ -1.07
RFC1-217ENST00000639695 PCDHA8Q9Y5H6 950 aa8.39□□□□□ -1.07
RFC1-217ENST00000639695 ASXL2Q76L83 1435 aa8.38□□□□□ -1.07
RFC1-217ENST00000639695 GAS7O60861 476 aa8.38□□□□□ -1.07
RFC1-217ENST00000639695 PI3P19957 117 aa8.38□□□□□ -1.07
RFC1-217ENST00000639695 GPR85P60893 370 aa8.38□□□□□ -1.07
RFC1-217ENST00000639695 OCRLQ01968 901 aa8.38□□□□□ -1.07
RFC1-217ENST00000639695 CHRNEQ04844 493 aa8.38□□□□□ -1.07
RFC1-217ENST00000639695 NMIQ13287 307 aaPredicted RBP8.38□□□□□ -1.07
RFC1-217ENST00000639695 PIN1Q13526 163 aaPredicted RBP8.38□□□□□ -1.07
RFC1-217ENST00000639695 SNX17Q15036 470 aa8.38□□□□□ -1.07
RFC1-217ENST00000639695 LRRC41Q15345 812 aa8.38□□□□□ -1.07
RFC1-217ENST00000639695 TCERG1LQ5VWI1 586 aa8.38□□□□□ -1.07
RFC1-217ENST00000639695 IQSEC1Q6DN90 963 aa8.38□□□□□ -1.07
RFC1-217ENST00000639695 KCNT2Q6UVM3 1135 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms