RNA–Protein interactions for RNA: ENST00000639244.1

SCN3A-209, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5 BASIC

Gene SCN3A, Length 8,854 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-209ENST00000639244 PDP2Q9P2J9 529 aa4.68□□□□□ -1.66
SCN3A-209ENST00000639244 ZNF215Q9UL58 517 aaPredicted RBP4.68□□□□□ -1.66
SCN3A-209ENST00000639244 AXIN2Q9Y2T1 843 aa4.68□□□□□ -1.66
SCN3A-209ENST00000639244 TACC3Q9Y6A5 838 aa4.68□□□□□ -1.66
SCN3A-209ENST00000639244 MYO7AQ13402 2215 aa4.68□□□□□ -1.66
SCN3A-209ENST00000639244 ARHGAP10A1A4S6 786 aa4.68□□□□□ -1.66
SCN3A-209ENST00000639244 C6orf222P0C671 652 aaPredicted RBP4.68□□□□□ -1.66
SCN3A-209ENST00000639244 STAT3P40763 770 aa4.68□□□□□ -1.66
SCN3A-209ENST00000639244 ATP2B2Q01814 1243 aa4.68□□□□□ -1.66
SCN3A-209ENST00000639244 TSC22D1Q15714 1073 aa4.68□□□□□ -1.66
SCN3A-209ENST00000639244 STK11Q15831 433 aa4.68□□□□□ -1.66
SCN3A-209ENST00000639244 NDUFAF5Q5TEU4 345 aa4.68□□□□□ -1.66
SCN3A-209ENST00000639244 MIS18BP1Q6P0N0 1132 aa4.68□□□□□ -1.66
SCN3A-209ENST00000639244 CRACR2BQ8N4Y2 399 aaPredicted RBP4.68□□□□□ -1.66
SCN3A-209ENST00000639244 DIS3LQ8TF46 1054 aaKnown RBP4.68□□□□□ -1.66
SCN3A-209ENST00000639244 HIC2Q96JB3 615 aa4.68□□□□□ -1.66
SCN3A-209ENST00000639244 ACAP3Q96P50 834 aa4.68□□□□□ -1.66
SCN3A-209ENST00000639244 FAM192AQ9GZU8 254 aa4.68□□□□□ -1.66
SCN3A-209ENST00000639244 PTPRHQ9HD43 1115 aa4.68□□□□□ -1.66
SCN3A-209ENST00000639244 ZC3H7BQ9UGR2 993 aaKnown RBP4.68□□□□□ -1.66
SCN3A-209ENST00000639244 MIA2Q96PC5 1412 aa4.68□□□□□ -1.66
SCN3A-209ENST00000639244 CLRN2A0PK11 232 aa4.68□□□□□ -1.66
SCN3A-209ENST00000639244 VCPP55072 806 aaKnown RBP4.68□□□□□ -1.66
SCN3A-209ENST00000639244 ROR1Q01973 937 aa4.68□□□□□ -1.66
SCN3A-209ENST00000639244 TBL3Q12788 808 aaKnown RBP4.68□□□□□ -1.66
SCN3A-209ENST00000639244 BYSLQ13895 437 aaKnown RBP4.68□□□□□ -1.66
SCN3A-209ENST00000639244 LRRTM3Q86VH5 581 aa4.68□□□□□ -1.66
SCN3A-209ENST00000639244 FHDC1Q9C0D6 1143 aaPredicted RBP4.68□□□□□ -1.66
SCN3A-209ENST00000639244 CAAP1Q9H8G2 361 aa4.68□□□□□ -1.66
SCN3A-209ENST00000639244 CLK4Q9HAZ1 481 aaKnown RBP4.68□□□□□ -1.66
SCN3A-209ENST00000639244 PCDHGB3Q9Y5G1 929 aa4.68□□□□□ -1.66
SCN3A-209ENST00000639244 FADS3Q9Y5Q0 445 aa4.68□□□□□ -1.66
SCN3A-209ENST00000639244 LRRC72A6NJI9 287 aa4.68□□□□□ -1.66
SCN3A-209ENST00000639244 AXIN1O15169 862 aa4.68□□□□□ -1.66
SCN3A-209ENST00000639244 LONP1P36776 959 aaKnown RBP4.68□□□□□ -1.66
SCN3A-209ENST00000639244 ST5P78524 1137 aa4.68□□□□□ -1.66
SCN3A-209ENST00000639244 RAB3GAP1Q15042 981 aa4.68□□□□□ -1.66
SCN3A-209ENST00000639244 IKBIPQ70UQ0 350 aa4.68□□□□□ -1.66
SCN3A-209ENST00000639244 KRT27Q7Z3Y8 459 aa4.68□□□□□ -1.66
SCN3A-209ENST00000639244 ZNF554Q86TJ5 538 aa4.68□□□□□ -1.66
SCN3A-209ENST00000639244 RNF135Q8IUD6 432 aa4.68□□□□□ -1.66
SCN3A-209ENST00000639244 LRRC47Q8N1G4 583 aaKnown RBP4.68□□□□□ -1.66
SCN3A-209ENST00000639244 FERMT2Q96AC1 680 aa4.68□□□□□ -1.66
SCN3A-209ENST00000639244 FAM169AQ9Y6X4 670 aa4.68□□□□□ -1.66
SCN3A-209ENST00000639244 ZBTB14O43829 449 aa4.67□□□□□ -1.66
SCN3A-209ENST00000639244 MYCP01106 439 aaPredicted RBP4.67□□□□□ -1.66
SCN3A-209ENST00000639244 ATP5OP48047 213 aa4.67□□□□□ -1.66
SCN3A-209ENST00000639244 RARSP54136 660 aaKnown RBP4.67□□□□□ -1.66
SCN3A-209ENST00000639244 GOLGA8FQ08AF8 430 aa4.67□□□□□ -1.66
SCN3A-209ENST00000639244 GOLGA8DPQ0D2H9 430 aa4.67□□□□□ -1.66
SCN3A-209ENST00000639244 ESCO1Q5FWF5 840 aa4.67□□□□□ -1.66
SCN3A-209ENST00000639244 TMEM87AQ8NBN3 555 aa4.67□□□□□ -1.66
SCN3A-209ENST00000639244 FAM71BQ8TC56 605 aa4.67□□□□□ -1.66
SCN3A-209ENST00000639244 C1orf74Q96LT6 269 aa4.67□□□□□ -1.66
SCN3A-209ENST00000639244 EPS15L1Q9UBC2 864 aa4.67□□□□□ -1.66
SCN3A-209ENST00000639244 ANKRD36BQ8N2N9 1353 aa4.67□□□□□ -1.66
SCN3A-209ENST00000639244 A6NJY4 79 aa4.67□□□□□ -1.66
SCN3A-209ENST00000639244 C9IYK1 514 aa4.67□□□□□ -1.66
SCN3A-209ENST00000639244 K7ENM7 598 aa4.67□□□□□ -1.66
SCN3A-209ENST00000639244 SUPT3HO75486 399 aa4.67□□□□□ -1.66
SCN3A-209ENST00000639244 FSBPO95073 299 aa4.67□□□□□ -1.66
SCN3A-209ENST00000639244 KRT6AP02538 564 aa4.67□□□□□ -1.66
SCN3A-209ENST00000639244 KRT6BP04259 564 aa4.67□□□□□ -1.66
SCN3A-209ENST00000639244 DNAJB2P25686 324 aa4.67□□□□□ -1.66
SCN3A-209ENST00000639244 CSTF2P33240 577 aaKnown RBP eCLIP4.67□□□□□ -1.66
SCN3A-209ENST00000639244 KRT6CP48668 564 aa4.67□□□□□ -1.66
SCN3A-209ENST00000639244 LIMK1P53667 647 aa4.67□□□□□ -1.66
SCN3A-209ENST00000639244 GRSF1Q12849 480 aaKnown RBP eCLIP4.67□□□□□ -1.66
SCN3A-209ENST00000639244 BZW1Q7L1Q6 419 aaKnown RBP4.67□□□□□ -1.66
SCN3A-209ENST00000639244 RASEFQ8IZ41 740 aa4.67□□□□□ -1.66
SCN3A-209ENST00000639244 HSPH1Q92598 858 aa4.67□□□□□ -1.66
SCN3A-209ENST00000639244 CFL2Q9Y281 166 aa4.67□□□□□ -1.66
SCN3A-209ENST00000639244 FHOD1Q9Y613 1164 aa4.67□□□□□ -1.66
SCN3A-209ENST00000639244 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.67□□□□□ -1.66
SCN3A-209ENST00000639244 A0A0G2JPF8 293 aa4.67□□□□□ -1.66
SCN3A-209ENST00000639244 SNTNA6NMZ2 147 aa4.67□□□□□ -1.66
SCN3A-209ENST00000639244 HNRNPCL3B7ZW38 293 aa4.67□□□□□ -1.66
SCN3A-209ENST00000639244 ALOX5P09917 674 aa4.67□□□□□ -1.66
SCN3A-209ENST00000639244 HNRNPCL4P0DMR1 293 aa4.67□□□□□ -1.66
SCN3A-209ENST00000639244 KRT5P13647 590 aa4.67□□□□□ -1.66
SCN3A-209ENST00000639244 CLCN6P51797 869 aa4.67□□□□□ -1.66
SCN3A-209ENST00000639244 CUL1Q13616 776 aa4.67□□□□□ -1.66
SCN3A-209ENST00000639244 DRICH1Q6PGQ1 229 aaPredicted RBP4.67□□□□□ -1.66
SCN3A-209ENST00000639244 HDXQ7Z353 690 aa4.67□□□□□ -1.66
SCN3A-209ENST00000639244 CAND1Q86VP6 1230 aaKnown RBP4.67□□□□□ -1.66
SCN3A-209ENST00000639244 PJA1Q8NG27 643 aa4.67□□□□□ -1.66
SCN3A-209ENST00000639244 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.67□□□□□ -1.66
SCN3A-209ENST00000639244 LPIN3Q9BQK8 851 aa4.67□□□□□ -1.66
SCN3A-209ENST00000639244 CHST12Q9NRB3 414 aa4.67□□□□□ -1.66
SCN3A-209ENST00000639244 LUZP4Q9P127 313 aa4.67□□□□□ -1.66
SCN3A-209ENST00000639244 SPG7Q9UQ90 795 aa4.67□□□□□ -1.66
SCN3A-209ENST00000639244 STK38LQ9Y2H1 464 aa4.67□□□□□ -1.66
SCN3A-209ENST00000639244 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.67□□□□□ -1.66
SCN3A-209ENST00000639244 UBAP1LF5GYI3 381 aa4.67□□□□□ -1.66
SCN3A-209ENST00000639244 KCNJ13O60928 360 aa4.67□□□□□ -1.66
SCN3A-209ENST00000639244 TMEM127O75204 238 aa4.67□□□□□ -1.66
SCN3A-209ENST00000639244 CES1P23141 567 aa4.67□□□□□ -1.66
SCN3A-209ENST00000639244 ADCY8P40145 1251 aa4.67□□□□□ -1.66
SCN3A-209ENST00000639244 SPIDRQ14159 915 aa4.67□□□□□ -1.66
SCN3A-209ENST00000639244 ABRAXAS1Q6UWZ7 409 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms