RNA–Protein interactions for RNA: ENST00000639071.1

NECAP1-215, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 2,578 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-215ENST00000639071 GALNT17Q6IS24 598 aa10.37□□□□□ -0.75
NECAP1-215ENST00000639071 LRRC55Q6ZSA7 311 aa10.37□□□□□ -0.75
NECAP1-215ENST00000639071 LSM14BQ9BX40 385 aaKnown RBP10.37□□□□□ -0.75
NECAP1-215ENST00000639071 MAGEF1Q9HAY2 307 aa10.37□□□□□ -0.75
NECAP1-215ENST00000639071 GOLGB1Q14789 3259 aaKnown RBP10.37□□□□□ -0.75
NECAP1-215ENST00000639071 NPHP3-ACAD11A0A0J9YXS1 232 aa10.37□□□□□ -0.75
NECAP1-215ENST00000639071 NDUFAB1O14561 156 aa10.37□□□□□ -0.75
NECAP1-215ENST00000639071 TLR2O60603 784 aa10.37□□□□□ -0.75
NECAP1-215ENST00000639071 ERLIN2O94905 339 aa10.37□□□□□ -0.75
NECAP1-215ENST00000639071 KLRC1P26715 233 aa10.37□□□□□ -0.75
NECAP1-215ENST00000639071 GNA11P29992 359 aa10.37□□□□□ -0.75
NECAP1-215ENST00000639071 RAPGEF1Q13905 1077 aa10.37□□□□□ -0.75
NECAP1-215ENST00000639071 UBE2SQ16763 222 aa10.37□□□□□ -0.75
NECAP1-215ENST00000639071 CFAP221Q4G0U5 840 aa10.37□□□□□ -0.75
NECAP1-215ENST00000639071 HGSNATQ68CP4 663 aa10.37□□□□□ -0.75
NECAP1-215ENST00000639071 UNC13DQ70J99 1090 aa10.37□□□□□ -0.75
NECAP1-215ENST00000639071 CCDC84Q86UT8 332 aaPredicted RBP10.37□□□□□ -0.75
NECAP1-215ENST00000639071 TBC1D5Q92609 795 aa10.37□□□□□ -0.75
NECAP1-215ENST00000639071 CEP95Q96GE4 821 aa10.37□□□□□ -0.75
NECAP1-215ENST00000639071 SH3GL2Q99962 352 aa10.37□□□□□ -0.75
NECAP1-215ENST00000639071 A0A087WUV0 522 aaPredicted RBP10.36□□□□□ -0.75
NECAP1-215ENST00000639071 KDM4FA0A1W2PPD8 638 aa10.36□□□□□ -0.75
NECAP1-215ENST00000639071 CDK8P49336 464 aa10.36□□□□□ -0.75
NECAP1-215ENST00000639071 LRRC47Q8N1G4 583 aaKnown RBP10.36□□□□□ -0.75
NECAP1-215ENST00000639071 FAM133AQ8N9E0 248 aa10.36□□□□□ -0.75
NECAP1-215ENST00000639071 RNPC3Q96LT9 517 aaKnown RBP10.36□□□□□ -0.75
NECAP1-215ENST00000639071 ZHX3Q9H4I2 956 aa10.36□□□□□ -0.75
NECAP1-215ENST00000639071 ADAMTS1Q9UHI8 967 aa10.36□□□□□ -0.75
NECAP1-215ENST00000639071 ZNF233A6NK53 670 aa10.36□□□□□ -0.75
NECAP1-215ENST00000639071 MARCH6O60337 910 aa10.36□□□□□ -0.75
NECAP1-215ENST00000639071 LCA5LO95447 670 aa10.36□□□□□ -0.75
NECAP1-215ENST00000639071 FAM83BQ5T0W9 1011 aa10.36□□□□□ -0.75
NECAP1-215ENST00000639071 CFAP58Q5T655 872 aa10.36□□□□□ -0.75
NECAP1-215ENST00000639071 SFMBT2Q5VUG0 894 aa10.36□□□□□ -0.75
NECAP1-215ENST00000639071 EMBQ6PCB8 327 aa10.36□□□□□ -0.75
NECAP1-215ENST00000639071 PTF1AQ7RTS3 328 aa10.36□□□□□ -0.75
NECAP1-215ENST00000639071 ANKS1AQ92625 1134 aa10.36□□□□□ -0.75
NECAP1-215ENST00000639071 RAD54LQ92698 747 aa10.36□□□□□ -0.75
NECAP1-215ENST00000639071 GPCPD1Q9NPB8 672 aa10.36□□□□□ -0.75
NECAP1-215ENST00000639071 A0A087X0T9 212 aa10.35□□□□□ -0.75
NECAP1-215ENST00000639071 NOL4O94818 638 aa10.35□□□□□ -0.75
NECAP1-215ENST00000639071 FAM228BP0C875 321 aa10.35□□□□□ -0.75
NECAP1-215ENST00000639071 PRLRP16471 622 aa10.35□□□□□ -0.75
NECAP1-215ENST00000639071 HPDP32754 393 aaPredicted RBP10.35□□□□□ -0.75
NECAP1-215ENST00000639071 SEC24CP53992 1094 aa10.35□□□□□ -0.75
NECAP1-215ENST00000639071 LAMB2P55268 1798 aa10.35□□□□□ -0.75
NECAP1-215ENST00000639071 NFIXQ14938 502 aa10.35□□□□□ -0.75
NECAP1-215ENST00000639071 KIAA0753Q2KHM9 967 aa10.35□□□□□ -0.75
NECAP1-215ENST00000639071 TMEM266Q2M3C6 531 aa10.35□□□□□ -0.75
NECAP1-215ENST00000639071 ASTE1Q2TB18 679 aaPredicted RBP10.35□□□□□ -0.75
NECAP1-215ENST00000639071 SLC9C1Q4G0N8 1177 aa10.35□□□□□ -0.75
NECAP1-215ENST00000639071 SPTY2D1Q68D10 685 aaPredicted RBP10.35□□□□□ -0.75
NECAP1-215ENST00000639071 MAATS1Q7Z4T9 603 aa10.35□□□□□ -0.75
NECAP1-215ENST00000639071 IFT20Q8IY31 132 aa10.35□□□□□ -0.75
NECAP1-215ENST00000639071 GUF1Q8N442 669 aaKnown RBP10.35□□□□□ -0.75
NECAP1-215ENST00000639071 COL22A1Q8NFW1 1626 aaPredicted RBP10.35□□□□□ -0.75
NECAP1-215ENST00000639071 CASKIN2Q8WXE0 1202 aa10.35□□□□□ -0.75
NECAP1-215ENST00000639071 SETDB2Q96T68 719 aa10.35□□□□□ -0.75
NECAP1-215ENST00000639071 TSG101Q99816 390 aa10.35□□□□□ -0.75
NECAP1-215ENST00000639071 SPZ1Q9BXG8 430 aa10.35□□□□□ -0.75
NECAP1-215ENST00000639071 EDIL3O43854 480 aa10.35□□□□□ -0.75
NECAP1-215ENST00000639071 BAG3O95817 575 aa10.35□□□□□ -0.75
NECAP1-215ENST00000639071 BTDP43251 543 aa10.35□□□□□ -0.75
NECAP1-215ENST00000639071 KRT79Q5XKE5 535 aa10.35□□□□□ -0.75
NECAP1-215ENST00000639071 CLEC4GQ6UXB4 293 aa10.35□□□□□ -0.75
NECAP1-215ENST00000639071 ZNF572Q7Z3I7 529 aaPredicted RBP10.35□□□□□ -0.75
NECAP1-215ENST00000639071 MYOCDQ8IZQ8 938 aa10.35□□□□□ -0.75
NECAP1-215ENST00000639071 OR2W6PQ8NHA6 318 aa10.35□□□□□ -0.75
NECAP1-215ENST00000639071 MTMR9Q96QG7 549 aa10.35□□□□□ -0.75
NECAP1-215ENST00000639071 ANKRD2Q9GZV1 360 aa10.35□□□□□ -0.75
NECAP1-215ENST00000639071 CCDC88AQ3V6T2 1871 aa10.35□□□□□ -0.75
NECAP1-215ENST00000639071 RREB1Q92766 1687 aa10.35□□□□□ -0.75
NECAP1-215ENST00000639071 E9PMD0 336 aa10.34□□□□□ -0.75
NECAP1-215ENST00000639071 RAD21O60216 631 aa10.34□□□□□ -0.75
NECAP1-215ENST00000639071 ACTN1P12814 892 aa10.34□□□□□ -0.75
NECAP1-215ENST00000639071 INPP5BP32019 993 aa10.34□□□□□ -0.75
NECAP1-215ENST00000639071 PPP1R2P41236 205 aa10.34□□□□□ -0.75
NECAP1-215ENST00000639071 COASYQ13057 564 aa10.34□□□□□ -0.75
NECAP1-215ENST00000639071 HLTFQ14527 1009 aaKnown RBP eCLIP10.34□□□□□ -0.75
NECAP1-215ENST00000639071 ALS2CLQ60I27 953 aa10.34□□□□□ -0.75
NECAP1-215ENST00000639071 DDX42Q86XP3 938 aaKnown RBP eCLIP10.34□□□□□ -0.75
NECAP1-215ENST00000639071 TEX11Q8IYF3 940 aa10.34□□□□□ -0.75
NECAP1-215ENST00000639071 CAVIN3Q969G5 261 aa10.34□□□□□ -0.75
NECAP1-215ENST00000639071 COL4A3BPQ9Y5P4 624 aa10.34□□□□□ -0.75
NECAP1-215ENST00000639071 PVALEFA0A1B0GWK0 134 aa10.34□□□□□ -0.75
NECAP1-215ENST00000639071 PJA2O43164 708 aa10.34□□□□□ -0.75
NECAP1-215ENST00000639071 RAD51CO43502 376 aa10.34□□□□□ -0.75
NECAP1-215ENST00000639071 FGFR1OPO95684 399 aaKnown RBP10.34□□□□□ -0.75
NECAP1-215ENST00000639071 ADCY7P51828 1080 aa10.34□□□□□ -0.75
NECAP1-215ENST00000639071 LRRC63Q05C16 580 aa10.34□□□□□ -0.75
NECAP1-215ENST00000639071 ITIH3Q06033 890 aa10.34□□□□□ -0.75
NECAP1-215ENST00000639071 GBP6Q6ZN66 633 aa10.34□□□□□ -0.75
NECAP1-215ENST00000639071 PIK3R5Q8WYR1 880 aa10.34□□□□□ -0.75
NECAP1-215ENST00000639071 AP1M1Q9BXS5 423 aa10.34□□□□□ -0.75
NECAP1-215ENST00000639071 PANK4Q9NVE7 773 aa10.34□□□□□ -0.75
NECAP1-215ENST00000639071 ROBO1Q9Y6N7 1651 aa10.33□□□□□ -0.76
NECAP1-215ENST00000639071 MYO1FO00160 1098 aa10.33□□□□□ -0.76
NECAP1-215ENST00000639071 KCNK3O14649 394 aa10.33□□□□□ -0.76
NECAP1-215ENST00000639071 SLC16A2P36021 539 aa10.33□□□□□ -0.76
NECAP1-215ENST00000639071 EPS15P42566 896 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms