RNA–Protein interactions for RNA: ENST00000638680.1

SCARB2-213, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 5,817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-213ENST00000638680 SLMAPQ14BN4 828 aa20.06■□□□□ 0.8
SCARB2-213ENST00000638680 MIS12Q9H081 205 aa20.05■□□□□ 0.8
SCARB2-213ENST00000638680 ZMYND12Q9H0C1 365 aa20.05■□□□□ 0.8
SCARB2-213ENST00000638680 ADGBQ8N7X0 1667 aa20.05■□□□□ 0.8
SCARB2-213ENST00000638680 SYNJ2BP-COX16A0A087WUM0 186 aa20.05■□□□□ 0.8
SCARB2-213ENST00000638680 EIF3CLB5ME19 914 aaKnown RBP20.05■□□□□ 0.8
SCARB2-213ENST00000638680 TRIM11Q96F44 468 aa20.05■□□□□ 0.8
SCARB2-213ENST00000638680 FMO2Q99518 471 aa20.05■□□□□ 0.8
SCARB2-213ENST00000638680 EIF3CQ99613 913 aaKnown RBP20.05■□□□□ 0.8
SCARB2-213ENST00000638680 COX16Q9P0S2 106 aa20.05■□□□□ 0.8
SCARB2-213ENST00000638680 STK17AQ9UEE5 414 aa20.05■□□□□ 0.8
SCARB2-213ENST00000638680 ADAM21Q9UKJ8 722 aa20.05■□□□□ 0.8
SCARB2-213ENST00000638680 MAP3K15Q6ZN16 1313 aa20.05■□□□□ 0.8
SCARB2-213ENST00000638680 GAP43P17677 238 aa20.05■□□□□ 0.8
SCARB2-213ENST00000638680 PI4K2BQ8TCG2 481 aa20.05■□□□□ 0.8
SCARB2-213ENST00000638680 MYO1CO00159 1063 aa20.05■□□□□ 0.8
SCARB2-213ENST00000638680 POLGP54098 1239 aaPredicted RBP20.05■□□□□ 0.8
SCARB2-213ENST00000638680 C10orf76Q5T2E6 689 aa20.05■□□□□ 0.8
SCARB2-213ENST00000638680 HDAC11Q96DB2 347 aa20.05■□□□□ 0.8
SCARB2-213ENST00000638680 ANO3Q9BYT9 981 aa20.05■□□□□ 0.8
SCARB2-213ENST00000638680 A6NJR5 290 aa20.05■□□□□ 0.8
SCARB2-213ENST00000638680 GPC4O75487 556 aa20.05■□□□□ 0.8
SCARB2-213ENST00000638680 IFNAR1P17181 557 aa20.05■□□□□ 0.8
SCARB2-213ENST00000638680 TRIM42Q8IWZ5 723 aa20.05■□□□□ 0.8
SCARB2-213ENST00000638680 SUGCTQ9HAC7 445 aa20.05■□□□□ 0.8
SCARB2-213ENST00000638680 DISC1Q9NRI5 854 aa20.05■□□□□ 0.8
SCARB2-213ENST00000638680 THEGQ9P2T0 379 aa20.05■□□□□ 0.8
SCARB2-213ENST00000638680 PLAAQ9Y263 795 aa20.05■□□□□ 0.8
SCARB2-213ENST00000638680 MGEA5O60502 916 aa20.04■□□□□ 0.8
SCARB2-213ENST00000638680 PLCG1P19174 1290 aa20.04■□□□□ 0.8
SCARB2-213ENST00000638680 PI16Q6UXB8 463 aa20.04■□□□□ 0.8
SCARB2-213ENST00000638680 MAP7D3Q8IWC1 876 aa20.04■□□□□ 0.8
SCARB2-213ENST00000638680 SDCCAG3Q96C92 435 aa20.04■□□□□ 0.8
SCARB2-213ENST00000638680 PCIF1Q9H4Z3 704 aa20.04■□□□□ 0.8
SCARB2-213ENST00000638680 SCOCQ9UIL1 159 aa20.04■□□□□ 0.8
SCARB2-213ENST00000638680 FOSP01100 380 aaPredicted RBP20.04■□□□□ 0.8
SCARB2-213ENST00000638680 STMN1P16949 149 aa20.04■□□□□ 0.8
SCARB2-213ENST00000638680 TBC1D10BQ4KMP7 808 aaPredicted RBP20.04■□□□□ 0.8
SCARB2-213ENST00000638680 CC2D1AQ6P1N0 951 aaPredicted RBP20.04■□□□□ 0.8
SCARB2-213ENST00000638680 RAPH1Q70E73 1250 aa20.04■□□□□ 0.8
SCARB2-213ENST00000638680 LCORLQ8N3X6 602 aa20.04■□□□□ 0.8
SCARB2-213ENST00000638680 NDST4Q9H3R1 872 aa20.04■□□□□ 0.8
SCARB2-213ENST00000638680 ANKRD20A4Q4UJ75 823 aa20.04■□□□□ 0.8
SCARB2-213ENST00000638680 ANKRD20A8PQ5CZ79 823 aa20.04■□□□□ 0.8
SCARB2-213ENST00000638680 ANKRD20A2Q5SQ80 823 aa20.04■□□□□ 0.8
SCARB2-213ENST00000638680 ANKRD20A1Q5TYW2 823 aa20.04■□□□□ 0.8
SCARB2-213ENST00000638680 SUPT20HQ8NEM7 779 aa20.04■□□□□ 0.8
SCARB2-213ENST00000638680 HNRNPDLO14979 420 aaKnown RBP20.04■□□□□ 0.8
SCARB2-213ENST00000638680 SRGAP2O75044 1071 aa20.04■□□□□ 0.8
SCARB2-213ENST00000638680 KRT1P04264 644 aa20.04■□□□□ 0.8
SCARB2-213ENST00000638680 MAGEA9P43362 315 aa20.04■□□□□ 0.8
SCARB2-213ENST00000638680 UBXN2AP68543 259 aa20.04■□□□□ 0.8
SCARB2-213ENST00000638680 RESP18Q5W5W9 173 aa20.04■□□□□ 0.8
SCARB2-213ENST00000638680 EMBQ6PCB8 327 aa20.04■□□□□ 0.8
SCARB2-213ENST00000638680 PRAMEF22A3QJZ6 481 aa20.03■□□□□ 0.8
SCARB2-213ENST00000638680 MEIS1O00470 390 aa20.03■□□□□ 0.8
SCARB2-213ENST00000638680 MCF2L2Q86YR7 1114 aa20.03■□□□□ 0.8
SCARB2-213ENST00000638680 HOOK2Q96ED9 719 aa20.03■□□□□ 0.8
SCARB2-213ENST00000638680 UBE2TQ9NPD8 197 aaPredicted RBP20.03■□□□□ 0.8
SCARB2-213ENST00000638680 ZSWIM5Q9P217 1185 aa20.03■□□□□ 0.8
SCARB2-213ENST00000638680 ERVK-7P63135 1459 aa20.03■□□□□ 0.8
SCARB2-213ENST00000638680 TTC4O95801 387 aa20.03■□□□□ 0.8
SCARB2-213ENST00000638680 EIF3BP55884 814 aaKnown RBP20.03■□□□□ 0.8
SCARB2-213ENST00000638680 DCLK2Q8N568 766 aa20.03■□□□□ 0.8
SCARB2-213ENST00000638680 PIGSQ96S52 555 aa20.03■□□□□ 0.8
SCARB2-213ENST00000638680 CSRNP1Q96S65 589 aa20.03■□□□□ 0.8
SCARB2-213ENST00000638680 MAP3K7O43318 606 aa20.03■□□□□ 0.8
SCARB2-213ENST00000638680 PRPF3O43395 683 aaKnown RBP20.03■□□□□ 0.8
SCARB2-213ENST00000638680 PDCLQ13371 301 aa20.03■□□□□ 0.8
SCARB2-213ENST00000638680 TBC1D1Q86TI0 1168 aaPredicted RBP20.03■□□□□ 0.8
SCARB2-213ENST00000638680 ABCA5Q8WWZ7 1642 aa20.03■□□□□ 0.8
SCARB2-213ENST00000638680 WDR46O15213 610 aaKnown RBP20.03■□□□□ 0.8
SCARB2-213ENST00000638680 DYNLT1P63172 113 aa20.03■□□□□ 0.8
SCARB2-213ENST00000638680 ASPRV1Q53RT3 343 aa20.03■□□□□ 0.8
SCARB2-213ENST00000638680 ZNF449Q6P9G9 518 aa20.03■□□□□ 0.8
SCARB2-213ENST00000638680 CXorf38Q8TB03 319 aa20.03■□□□□ 0.8
SCARB2-213ENST00000638680 M0QZ92 97 aa20.03■□□□□ 0.8
SCARB2-213ENST00000638680 CUL1Q13616 776 aa20.03■□□□□ 0.8
SCARB2-213ENST00000638680 WDR91A4D1P6 747 aa20.02■□□□□ 0.8
SCARB2-213ENST00000638680 MT-ND3P03897 115 aa20.02■□□□□ 0.8
SCARB2-213ENST00000638680 POLE2P56282 527 aa20.02■□□□□ 0.8
SCARB2-213ENST00000638680 TRIM56Q9BRZ2 755 aaKnown RBP20.02■□□□□ 0.8
SCARB2-213ENST00000638680 EMILIN3Q9NT22 766 aa20.02■□□□□ 0.8
SCARB2-213ENST00000638680 TCP10L2B9ZVM9 353 aa20.02■□□□□ 0.8
SCARB2-213ENST00000638680 HSPA6P17066 643 aa20.02■□□□□ 0.8
SCARB2-213ENST00000638680 ATP2B4P23634 1241 aa20.02■□□□□ 0.8
SCARB2-213ENST00000638680 KCTD1Q719H9 257 aa20.02■□□□□ 0.8
SCARB2-213ENST00000638680 GOLPH3LQ9H4A5 285 aa20.02■□□□□ 0.8
SCARB2-213ENST00000638680 AATKQ6ZMQ8 1374 aa20.02■□□□□ 0.8
SCARB2-213ENST00000638680 KIF21AQ7Z4S6 1674 aa20.02■□□□□ 0.8
SCARB2-213ENST00000638680 CPP00450 1065 aa20.02■□□□□ 0.8
SCARB2-213ENST00000638680 ALDH1B1P30837 517 aa20.02■□□□□ 0.8
SCARB2-213ENST00000638680 ACCSQ96QU6 501 aa20.02■□□□□ 0.8
SCARB2-213ENST00000638680 AMNQ9BXJ7 453 aa20.02■□□□□ 0.8
SCARB2-213ENST00000638680 INTUQ9ULD6 942 aa20.02■□□□□ 0.8
SCARB2-213ENST00000638680 FAM98CQ17RN3 349 aaKnown RBP20.02■□□□□ 0.79
SCARB2-213ENST00000638680 HAUS8Q9BT25 410 aa20.02■□□□□ 0.79
SCARB2-213ENST00000638680 EXOC1LA0A1B0GW35 172 aa20.01■□□□□ 0.79
SCARB2-213ENST00000638680 ZNF577Q9BSK1 485 aa20.01■□□□□ 0.79
SCARB2-213ENST00000638680 PPWD1Q96BP3 646 aaKnown RBP20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms