RNA–Protein interactions for RNA: ENST00000638400.1

GFAP-227, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5

Gene GFAP, Length 1,106 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-227ENST00000638400 GPKOWQ92917 476 aaPredicted RBP eCLIP14.41□□□□□ -0.1
GFAP-227ENST00000638400 INPP4AQ96PE3 977 aaPredicted RBP14.41□□□□□ -0.1
GFAP-227ENST00000638400 PPP1R12CQ9BZL4 782 aa14.41□□□□□ -0.1
GFAP-227ENST00000638400 HIPK3Q9H422 1215 aa14.41□□□□□ -0.1
GFAP-227ENST00000638400 NID2Q14112 1375 aa14.4□□□□□ -0.1
GFAP-227ENST00000638400 hCG_1984214I3L0E3 225 aa14.4□□□□□ -0.1
GFAP-227ENST00000638400 SUPT20HL2P0C7V6 817 aa14.4□□□□□ -0.1
GFAP-227ENST00000638400 UBA1P22314 1058 aaKnown RBP14.4□□□□□ -0.1
GFAP-227ENST00000638400 EPHB4P54760 987 aa14.4□□□□□ -0.1
GFAP-227ENST00000638400 MRPS9P82933 396 aaKnown RBP14.4□□□□□ -0.1
GFAP-227ENST00000638400 PPIGQ13427 754 aaKnown RBP eCLIP14.4□□□□□ -0.1
GFAP-227ENST00000638400 RABEP1Q15276 862 aa14.4□□□□□ -0.1
GFAP-227ENST00000638400 SHHQ15465 462 aa14.4□□□□□ -0.1
GFAP-227ENST00000638400 DGKDQ16760 1214 aa14.4□□□□□ -0.1
GFAP-227ENST00000638400 NBPF20Q3BBV1 942 aa14.4□□□□□ -0.1
GFAP-227ENST00000638400 FAM47CQ5HY64 1035 aa14.4□□□□□ -0.1
GFAP-227ENST00000638400 PCNX4Q63HM2 1172 aa14.4□□□□□ -0.1
GFAP-227ENST00000638400 WWC2Q6AWC2 1192 aa14.4□□□□□ -0.1
GFAP-227ENST00000638400 NFRKBQ6P4R8 1299 aa14.4□□□□□ -0.1
GFAP-227ENST00000638400 TEX2Q8IWB9 1127 aa14.4□□□□□ -0.1
GFAP-227ENST00000638400 TMEM199Q8N511 208 aa14.4□□□□□ -0.1
GFAP-227ENST00000638400 ZNF713Q8N859 430 aaPredicted RBP14.4□□□□□ -0.1
GFAP-227ENST00000638400 SZT2Q5T011 3432 aa14.4□□□□□ -0.1
GFAP-227ENST00000638400 SPDYE3A6NKU9 549 aa14.39□□□□□ -0.11
GFAP-227ENST00000638400 FIBPO43427 364 aa14.39□□□□□ -0.11
GFAP-227ENST00000638400 GGPS1O95749 300 aa14.39□□□□□ -0.11
GFAP-227ENST00000638400 CDC27P30260 824 aa14.39□□□□□ -0.11
GFAP-227ENST00000638400 NAPAP54920 295 aa14.39□□□□□ -0.11
GFAP-227ENST00000638400 PTPN11Q06124 597 aaPredicted RBP14.39□□□□□ -0.11
GFAP-227ENST00000638400 UBE2SQ16763 222 aa14.39□□□□□ -0.11
GFAP-227ENST00000638400 CELF3Q5SZQ8 465 aaKnown RBP14.39□□□□□ -0.11
GFAP-227ENST00000638400 MYSM1Q5VVJ2 828 aa14.39□□□□□ -0.11
GFAP-227ENST00000638400 ZFP91Q96JP5 570 aaPredicted RBP14.39□□□□□ -0.11
GFAP-227ENST00000638400 SPATA33Q96N06 139 aa14.39□□□□□ -0.11
GFAP-227ENST00000638400 KIF2CQ99661 725 aa14.39□□□□□ -0.11
GFAP-227ENST00000638400 NOC4LQ9BVI4 516 aaKnown RBP14.39□□□□□ -0.11
GFAP-227ENST00000638400 USP26Q9BXU7 913 aa14.39□□□□□ -0.11
GFAP-227ENST00000638400 AGXT2Q9BYV1 514 aa14.39□□□□□ -0.11
GFAP-227ENST00000638400 FAM217BQ9NTX9 383 aaPredicted RBP14.39□□□□□ -0.11
GFAP-227ENST00000638400 TRMT13Q9NUP7 481 aaKnown RBP14.39□□□□□ -0.11
GFAP-227ENST00000638400 V9GY48 417 aaPredicted RBP14.39□□□□□ -0.11
GFAP-227ENST00000638400 K7ELQ4 463 aaPredicted RBP14.38□□□□□ -0.11
GFAP-227ENST00000638400 HOXD8P13378 290 aaPredicted RBP14.38□□□□□ -0.11
GFAP-227ENST00000638400 CSF2RAP15509 400 aa14.38□□□□□ -0.11
GFAP-227ENST00000638400 ICAM3P32942 547 aa14.38□□□□□ -0.11
GFAP-227ENST00000638400 CYP2C18P33260 490 aa14.38□□□□□ -0.11
GFAP-227ENST00000638400 ADCY7P51828 1080 aa14.38□□□□□ -0.11
GFAP-227ENST00000638400 CHMP4BP1P59074 171 aa14.38□□□□□ -0.11
GFAP-227ENST00000638400 CLEC17AQ6ZS10 378 aa14.38□□□□□ -0.11
GFAP-227ENST00000638400 RUFY3Q7L099 469 aa14.38□□□□□ -0.11
GFAP-227ENST00000638400 RNPC3Q96LT9 517 aaKnown RBP14.38□□□□□ -0.11
GFAP-227ENST00000638400 GBP4Q96PP9 640 aa14.38□□□□□ -0.11
GFAP-227ENST00000638400 KATNAL1Q9BW62 490 aa14.38□□□□□ -0.11
GFAP-227ENST00000638400 EHMT1Q9H9B1 1298 aa14.38□□□□□ -0.11
GFAP-227ENST00000638400 MLXIPQ9HAP2 919 aa14.38□□□□□ -0.11
GFAP-227ENST00000638400 ZSWIM6Q9HCJ5 1215 aa14.38□□□□□ -0.11
GFAP-227ENST00000638400 BARHL2Q9NY43 387 aa14.38□□□□□ -0.11
GFAP-227ENST00000638400 CYP46A1Q9Y6A2 500 aa14.38□□□□□ -0.11
GFAP-227ENST00000638400 BAZ2BQ9UIF8 2168 aaKnown RBP14.38□□□□□ -0.11
GFAP-227ENST00000638400 MYH6P13533 1939 aa14.38□□□□□ -0.11
GFAP-227ENST00000638400 SPATA31C2B4DYI2 1134 aa14.37□□□□□ -0.11
GFAP-227ENST00000638400 STXBP3O00186 592 aa14.37□□□□□ -0.11
GFAP-227ENST00000638400 SORBS3O60504 671 aa14.37□□□□□ -0.11
GFAP-227ENST00000638400 F2P00734 622 aa14.37□□□□□ -0.11
GFAP-227ENST00000638400 ZNF286BP0CG31 522 aa14.37□□□□□ -0.11
GFAP-227ENST00000638400 ADD1P35611 737 aaKnown RBP14.37□□□□□ -0.11
GFAP-227ENST00000638400 SP2Q02086 613 aa14.37□□□□□ -0.11
GFAP-227ENST00000638400 HSDL1Q3SXM5 330 aa14.37□□□□□ -0.11
GFAP-227ENST00000638400 TYW1BQ6NUM6 668 aa14.37□□□□□ -0.11
GFAP-227ENST00000638400 PSRC1Q6PGN9 363 aaPredicted RBP14.37□□□□□ -0.11
GFAP-227ENST00000638400 NLRX1Q86UT6 975 aa14.37□□□□□ -0.11
GFAP-227ENST00000638400 SESTD1Q86VW0 696 aa14.37□□□□□ -0.11
GFAP-227ENST00000638400 KAT2BQ92831 832 aa14.37□□□□□ -0.11
GFAP-227ENST00000638400 TM6SF1Q9BZW5 370 aa14.37□□□□□ -0.11
GFAP-227ENST00000638400 GLT8D2Q9H1C3 349 aa14.37□□□□□ -0.11
GFAP-227ENST00000638400 RIC8AQ9NPQ8 531 aa14.37□□□□□ -0.11
GFAP-227ENST00000638400 RTEL1Q9NZ71 1219 aa14.37□□□□□ -0.11
GFAP-227ENST00000638400 NOD1Q9Y239 953 aa14.37□□□□□ -0.11
GFAP-227ENST00000638400 UMODL1Q5DID0 1318 aa14.37□□□□□ -0.11
GFAP-227ENST00000638400 NOP56O00567 594 aaKnown RBP14.36□□□□□ -0.11
GFAP-227ENST00000638400 PPFIA4O75335 1185 aa14.36□□□□□ -0.11
GFAP-227ENST00000638400 CYP2C9P11712 490 aa14.36□□□□□ -0.11
GFAP-227ENST00000638400 PSEN2P49810 448 aa14.36□□□□□ -0.11
GFAP-227ENST00000638400 EVCP57679 992 aa14.36□□□□□ -0.11
GFAP-227ENST00000638400 SEMA3FQ13275 785 aa14.36□□□□□ -0.11
GFAP-227ENST00000638400 NEDD9Q14511 834 aa14.36□□□□□ -0.11
GFAP-227ENST00000638400 MFSD10Q14728 455 aa14.36□□□□□ -0.11
GFAP-227ENST00000638400 PFKFB3Q16875 520 aaPredicted RBP14.36□□□□□ -0.11
GFAP-227ENST00000638400 SKOR2Q2VWA4 1001 aaPredicted RBP14.36□□□□□ -0.11
GFAP-227ENST00000638400 METTL7BQ6UX53 244 aa14.36□□□□□ -0.11
GFAP-227ENST00000638400 C7orf31Q8N865 590 aa14.36□□□□□ -0.11
GFAP-227ENST00000638400 PPP1R13LQ8WUF5 828 aa14.36□□□□□ -0.11
GFAP-227ENST00000638400 GPRASP2Q96D09 838 aa14.36□□□□□ -0.11
GFAP-227ENST00000638400 CDHR1Q96JP9 859 aa14.36□□□□□ -0.11
GFAP-227ENST00000638400 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.36□□□□□ -0.11
GFAP-227ENST00000638400 WNT8AQ9H1J5 351 aa14.36□□□□□ -0.11
GFAP-227ENST00000638400 IL23AQ9NPF7 189 aa14.36□□□□□ -0.11
GFAP-227ENST00000638400 PCDHA6Q9UN73 950 aa14.36□□□□□ -0.11
GFAP-227ENST00000638400 PCDHA8Q9Y5H6 950 aa14.36□□□□□ -0.11
GFAP-227ENST00000638400 FSD2A1L4K1 749 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms