RNA–Protein interactions for RNA: ENST00000638159.1

GABRA1-220, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

TSL 5 BASIC

Gene GABRA1, Length 4,088 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-220ENST00000638159 GAD1Q99259 594 aa5.06□□□□□ -1.6
GABRA1-220ENST00000638159 ARHGEF3Q9NR81 526 aa5.06□□□□□ -1.6
GABRA1-220ENST00000638159 ZSCAN32Q9NX65 697 aa5.06□□□□□ -1.6
GABRA1-220ENST00000638159 MAP10Q9P2G4 905 aa5.06□□□□□ -1.6
GABRA1-220ENST00000638159 SAMM50Q9Y512 469 aa5.06□□□□□ -1.6
GABRA1-220ENST00000638159 RP1L1Q8IWN7 2480 aaPredicted RBP5.05□□□□□ -1.6
GABRA1-220ENST00000638159 PRRC2BQ5JSZ5 2229 aaKnown RBP5.05□□□□□ -1.6
GABRA1-220ENST00000638159 IGSF3O75054 1194 aa5.05□□□□□ -1.6
GABRA1-220ENST00000638159 ABCG1P45844 678 aa5.05□□□□□ -1.6
GABRA1-220ENST00000638159 FOSBP53539 338 aa5.05□□□□□ -1.6
GABRA1-220ENST00000638159 UBE3AQ05086 875 aa5.05□□□□□ -1.6
GABRA1-220ENST00000638159 SH3D19Q5HYK7 790 aa5.05□□□□□ -1.6
GABRA1-220ENST00000638159 LHX8Q68G74 356 aa5.05□□□□□ -1.6
GABRA1-220ENST00000638159 TAF2Q6P1X5 1199 aa5.05□□□□□ -1.6
GABRA1-220ENST00000638159 GTPBP2Q9BX10 602 aaKnown RBP5.05□□□□□ -1.6
GABRA1-220ENST00000638159 ZNF112Q9UJU3 913 aa5.05□□□□□ -1.6
GABRA1-220ENST00000638159 FPGT-TNNI3KV9GXZ4 949 aa5.05□□□□□ -1.6
GABRA1-220ENST00000638159 CEMIPQ8WUJ3 1361 aa5.05□□□□□ -1.6
GABRA1-220ENST00000638159 RPS6KA5O75582 802 aa5.05□□□□□ -1.6
GABRA1-220ENST00000638159 ADRB1P08588 477 aa5.05□□□□□ -1.6
GABRA1-220ENST00000638159 AFMP43652 599 aa5.05□□□□□ -1.6
GABRA1-220ENST00000638159 NR1H3Q13133 447 aa5.05□□□□□ -1.6
GABRA1-220ENST00000638159 HNRNPDQ14103 355 aaKnown RBP5.05□□□□□ -1.6
GABRA1-220ENST00000638159 NFRKBQ6P4R8 1299 aa5.05□□□□□ -1.6
GABRA1-220ENST00000638159 C19orf48Q6RUI8 117 aa5.05□□□□□ -1.6
GABRA1-220ENST00000638159 ZNF852Q6ZMS4 543 aa5.05□□□□□ -1.6
GABRA1-220ENST00000638159 ATCAYQ86WG3 371 aa5.05□□□□□ -1.6
GABRA1-220ENST00000638159 GLIS3Q8NEA6 775 aa5.05□□□□□ -1.6
GABRA1-220ENST00000638159 FRAT1Q92837 279 aaPredicted RBP5.05□□□□□ -1.6
GABRA1-220ENST00000638159 SPATA33Q96N06 139 aa5.05□□□□□ -1.6
GABRA1-220ENST00000638159 SUGCTQ9HAC7 445 aa5.05□□□□□ -1.6
GABRA1-220ENST00000638159 SEC63Q9UGP8 760 aaKnown RBP5.05□□□□□ -1.6
GABRA1-220ENST00000638159 SYNRGQ9UMZ2 1314 aa5.05□□□□□ -1.6
GABRA1-220ENST00000638159 DHPSP49366 369 aaPredicted RBP5.05□□□□□ -1.6
GABRA1-220ENST00000638159 PSEN2P49810 448 aa5.05□□□□□ -1.6
GABRA1-220ENST00000638159 GJA9P57773 515 aa5.05□□□□□ -1.6
GABRA1-220ENST00000638159 SUZ12Q15022 739 aaKnown RBP5.05□□□□□ -1.6
GABRA1-220ENST00000638159 MORN1Q5T089 497 aa5.05□□□□□ -1.6
GABRA1-220ENST00000638159 SDE2Q6IQ49 451 aa5.05□□□□□ -1.6
GABRA1-220ENST00000638159 ADAT2Q7Z6V5 191 aaKnown RBP5.05□□□□□ -1.6
GABRA1-220ENST00000638159 METTL13Q8N6R0 699 aa5.05□□□□□ -1.6
GABRA1-220ENST00000638159 MAGEB6Q8N7X4 407 aa5.05□□□□□ -1.6
GABRA1-220ENST00000638159 RMDN1Q96DB5 314 aa5.05□□□□□ -1.6
GABRA1-220ENST00000638159 CDHR1Q96JP9 859 aa5.05□□□□□ -1.6
GABRA1-220ENST00000638159 TCF25Q9BQ70 676 aa5.05□□□□□ -1.6
GABRA1-220ENST00000638159 C17orf80Q9BSJ5 609 aa5.05□□□□□ -1.6
GABRA1-220ENST00000638159 PHF20Q9BVI0 1012 aa5.05□□□□□ -1.6
GABRA1-220ENST00000638159 TRMT13Q9NUP7 481 aaKnown RBP5.05□□□□□ -1.6
GABRA1-220ENST00000638159 G3BP2Q9UN86 482 aaKnown RBP5.05□□□□□ -1.6
GABRA1-220ENST00000638159 PCDHAC2Q9Y5I4 1007 aa5.05□□□□□ -1.6
GABRA1-220ENST00000638159 LINC01553A4QN01 128 aa5.04□□□□□ -1.6
GABRA1-220ENST00000638159 DDTLA6NHG4 134 aaPredicted RBP5.04□□□□□ -1.6
GABRA1-220ENST00000638159 MEI4A8MW99 385 aa5.04□□□□□ -1.6
GABRA1-220ENST00000638159 CFBP00751 764 aa5.04□□□□□ -1.6
GABRA1-220ENST00000638159 GHRP10912 638 aa5.04□□□□□ -1.6
GABRA1-220ENST00000638159 TRIM21P19474 475 aaKnown RBP5.04□□□□□ -1.6
GABRA1-220ENST00000638159 CXCL12P48061 93 aa5.04□□□□□ -1.6
GABRA1-220ENST00000638159 RRP1BQ14684 758 aaKnown RBP5.04□□□□□ -1.6
GABRA1-220ENST00000638159 LBX2Q6XYB7 198 aa5.04□□□□□ -1.6
GABRA1-220ENST00000638159 GET4Q7L5D6 327 aaPredicted RBP5.04□□□□□ -1.6
GABRA1-220ENST00000638159 TRMT1LQ7Z2T5 733 aaKnown RBP5.04□□□□□ -1.6
GABRA1-220ENST00000638159 UBE2Q1Q7Z7E8 422 aa5.04□□□□□ -1.6
GABRA1-220ENST00000638159 NSUN6Q8TEA1 469 aaKnown RBP5.04□□□□□ -1.6
GABRA1-220ENST00000638159 SPOCK2Q92563 424 aa5.04□□□□□ -1.6
GABRA1-220ENST00000638159 PGBD4Q96DM1 585 aa5.04□□□□□ -1.6
GABRA1-220ENST00000638159 INO80BQ9C086 356 aaPredicted RBP5.04□□□□□ -1.6
GABRA1-220ENST00000638159 THG1LQ9NWX6 298 aaKnown RBP5.04□□□□□ -1.6
GABRA1-220ENST00000638159 BARX2Q9UMQ3 279 aaPredicted RBP5.04□□□□□ -1.6
GABRA1-220ENST00000638159 ZNF462Q96JM2 2506 aa5.04□□□□□ -1.6
GABRA1-220ENST00000638159 SPDYE16A6NNV3 312 aaPredicted RBP5.04□□□□□ -1.6
GABRA1-220ENST00000638159 APAF1O14727 1248 aa5.04□□□□□ -1.6
GABRA1-220ENST00000638159 ARHGAP6O43182 974 aa5.04□□□□□ -1.6
GABRA1-220ENST00000638159 PROS1P07225 676 aa5.04□□□□□ -1.6
GABRA1-220ENST00000638159 IQCF3P0C7M6 154 aa5.04□□□□□ -1.6
GABRA1-220ENST00000638159 SKIP12755 728 aa5.04□□□□□ -1.6
GABRA1-220ENST00000638159 WDR5P61964 334 aaKnown RBP5.04□□□□□ -1.6
GABRA1-220ENST00000638159 CREB5Q02930 508 aa5.04□□□□□ -1.6
GABRA1-220ENST00000638159 NEDD9Q14511 834 aa5.04□□□□□ -1.6
GABRA1-220ENST00000638159 CYP2U1Q7Z449 544 aa5.04□□□□□ -1.6
GABRA1-220ENST00000638159 RABEPKQ7Z6M1 372 aa5.04□□□□□ -1.6
GABRA1-220ENST00000638159 TMEFF1Q8IYR6 380 aa5.04□□□□□ -1.6
GABRA1-220ENST00000638159 CCDC8Q9H0W5 538 aaPredicted RBP5.04□□□□□ -1.6
GABRA1-220ENST00000638159 EMILIN3Q9NT22 766 aa5.04□□□□□ -1.6
GABRA1-220ENST00000638159 ANKRD36CQ5JPF3 1778 aa5.04□□□□□ -1.6
GABRA1-220ENST00000638159 FAM170BA6NMN3 283 aa5.04□□□□□ -1.6
GABRA1-220ENST00000638159 RGS20O76081 388 aa5.04□□□□□ -1.6
GABRA1-220ENST00000638159 LRG1P02750 347 aa5.04□□□□□ -1.6
GABRA1-220ENST00000638159 RETP07949 1114 aa5.04□□□□□ -1.6
GABRA1-220ENST00000638159 KLRK1P26718 216 aa5.04□□□□□ -1.6
GABRA1-220ENST00000638159 KIF5BP33176 963 aa5.04□□□□□ -1.6
GABRA1-220ENST00000638159 CCINQ13939 588 aa5.04□□□□□ -1.6
GABRA1-220ENST00000638159 MAPK6Q16659 721 aa5.04□□□□□ -1.6
GABRA1-220ENST00000638159 CCDC102BQ68D86 513 aa5.04□□□□□ -1.6
GABRA1-220ENST00000638159 TMED8Q6PL24 325 aaPredicted RBP5.04□□□□□ -1.6
GABRA1-220ENST00000638159 TMC5Q6UXY8 1006 aa5.04□□□□□ -1.6
GABRA1-220ENST00000638159 TAOK1Q7L7X3 1001 aa5.04□□□□□ -1.6
GABRA1-220ENST00000638159 FBXO33Q7Z6M2 555 aa5.04□□□□□ -1.6
GABRA1-220ENST00000638159 IQCA1Q86XH1 822 aa5.04□□□□□ -1.6
GABRA1-220ENST00000638159 FBXO16Q8IX29 292 aaPredicted RBP5.04□□□□□ -1.6
GABRA1-220ENST00000638159 PRSS33Q8NF86 280 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms