RNA–Protein interactions for RNA: ENST00000638141.1

CAPN3-221, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 2,358 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-221ENST00000638141 TNNC1P63316 161 aa13.17□□□□□ -0.3
CAPN3-221ENST00000638141 ADAM9Q13443 819 aa13.17□□□□□ -0.3
CAPN3-221ENST00000638141 RRAGBQ5VZM2 374 aa13.17□□□□□ -0.3
CAPN3-221ENST00000638141 ZNF530Q6P9A1 599 aaPredicted RBP13.17□□□□□ -0.3
CAPN3-221ENST00000638141 SMYD4Q8IYR2 804 aaPredicted RBP13.17□□□□□ -0.3
CAPN3-221ENST00000638141 IFIH1Q9BYX4 1025 aaKnown RBP13.17□□□□□ -0.3
CAPN3-221ENST00000638141 NSRP1Q9H0G5 558 aaKnown RBP13.17□□□□□ -0.3
CAPN3-221ENST00000638141 ZWILCHQ9H900 591 aa13.17□□□□□ -0.3
CAPN3-221ENST00000638141 SAMD15Q9P1V8 674 aa13.17□□□□□ -0.3
CAPN3-221ENST00000638141 ABCA3Q99758 1704 aa13.17□□□□□ -0.3
CAPN3-221ENST00000638141 A0A087X0B3 334 aa13.17□□□□□ -0.3
CAPN3-221ENST00000638141 TRIM75PA6NK02 468 aa13.17□□□□□ -0.3
CAPN3-221ENST00000638141 BTBD18B2RXH4 712 aa13.17□□□□□ -0.3
CAPN3-221ENST00000638141 DEXIO95424 95 aa13.17□□□□□ -0.3
CAPN3-221ENST00000638141 ACADSP16219 412 aa13.17□□□□□ -0.3
CAPN3-221ENST00000638141 MRPS25P82663 173 aaKnown RBP13.17□□□□□ -0.3
CAPN3-221ENST00000638141 ODF2Q5BJF6 829 aa13.17□□□□□ -0.3
CAPN3-221ENST00000638141 RRP12Q5JTH9 1297 aaKnown RBP13.17□□□□□ -0.3
CAPN3-221ENST00000638141 PHKBQ93100 1093 aa13.17□□□□□ -0.3
CAPN3-221ENST00000638141 CCDC42Q96M95 316 aa13.17□□□□□ -0.3
CAPN3-221ENST00000638141 FAM217BQ9NTX9 383 aaPredicted RBP13.17□□□□□ -0.3
CAPN3-221ENST00000638141 TMEM59LQ9UK28 342 aa13.17□□□□□ -0.3
CAPN3-221ENST00000638141 AGAP1Q9UPQ3 857 aa13.17□□□□□ -0.3
CAPN3-221ENST00000638141 TIAM2Q8IVF5 1701 aa13.17□□□□□ -0.3
CAPN3-221ENST00000638141 CASZ1Q86V15 1759 aa13.17□□□□□ -0.3
CAPN3-221ENST00000638141 ARFGEF2Q9Y6D5 1785 aa13.17□□□□□ -0.3
CAPN3-221ENST00000638141 MOCS3O95396 460 aa13.16□□□□□ -0.3
CAPN3-221ENST00000638141 MSH2P43246 934 aa13.16□□□□□ -0.3
CAPN3-221ENST00000638141 AFMP43652 599 aa13.16□□□□□ -0.3
CAPN3-221ENST00000638141 HAND2P61296 217 aa13.16□□□□□ -0.3
CAPN3-221ENST00000638141 KCNJ2P63252 427 aa13.16□□□□□ -0.3
CAPN3-221ENST00000638141 BNIP1Q12981 228 aa13.16□□□□□ -0.3
CAPN3-221ENST00000638141 PABPC1LQ4VXU2 614 aaKnown RBP13.16□□□□□ -0.3
CAPN3-221ENST00000638141 ARMC3Q5W041 872 aa13.16□□□□□ -0.3
CAPN3-221ENST00000638141 USP49Q70CQ1 688 aa13.16□□□□□ -0.3
CAPN3-221ENST00000638141 ATG9AQ7Z3C6 839 aa13.16□□□□□ -0.3
CAPN3-221ENST00000638141 IP6K1Q92551 441 aa13.16□□□□□ -0.3
CAPN3-221ENST00000638141 PBKQ96KB5 322 aa13.16□□□□□ -0.3
CAPN3-221ENST00000638141 MYD88Q99836 296 aa13.16□□□□□ -0.3
CAPN3-221ENST00000638141 FAM167BQ9BTA0 163 aa13.16□□□□□ -0.3
CAPN3-221ENST00000638141 SLC26A6Q9BXS9 759 aa13.16□□□□□ -0.3
CAPN3-221ENST00000638141 VCXQ9H320 206 aa13.16□□□□□ -0.3
CAPN3-221ENST00000638141 NOVA2Q9UNW9 492 aaKnown RBP13.16□□□□□ -0.3
CAPN3-221ENST00000638141 PCDHB6Q9Y5E3 794 aa13.16□□□□□ -0.3
CAPN3-221ENST00000638141 SPATA31A6Q5VVP1 1343 aa13.16□□□□□ -0.3
CAPN3-221ENST00000638141 CAMTA1Q9Y6Y1 1673 aa13.16□□□□□ -0.3
CAPN3-221ENST00000638141 MYH2Q9UKX2 1941 aa13.16□□□□□ -0.3
CAPN3-221ENST00000638141 C5P01031 1676 aa13.16□□□□□ -0.3
CAPN3-221ENST00000638141 ZSCAN5CA6NGD5 496 aaPredicted RBP13.16□□□□□ -0.3
CAPN3-221ENST00000638141 OAS1P00973 400 aaKnown RBP13.16□□□□□ -0.3
CAPN3-221ENST00000638141 KLC1Q07866 573 aa13.16□□□□□ -0.3
CAPN3-221ENST00000638141 KLHDC7AQ5VTJ3 777 aa13.16□□□□□ -0.3
CAPN3-221ENST00000638141 ASRGL1Q7L266 308 aa13.16□□□□□ -0.3
CAPN3-221ENST00000638141 INPP4AQ96PE3 977 aaPredicted RBP13.16□□□□□ -0.3
CAPN3-221ENST00000638141 MLXIPQ9HAP2 919 aa13.16□□□□□ -0.3
CAPN3-221ENST00000638141 PLAGL2Q9UPG8 496 aa13.16□□□□□ -0.3
CAPN3-221ENST00000638141 ESYT3A0FGR9 886 aa13.15□□□□□ -0.3
CAPN3-221ENST00000638141 SPDYE5A6NIY4 337 aa13.15□□□□□ -0.3
CAPN3-221ENST00000638141 IGF2BP3O00425 579 aaKnown RBP eCLIP13.15□□□□□ -0.3
CAPN3-221ENST00000638141 CTNND1O60716 968 aaKnown RBP13.15□□□□□ -0.3
CAPN3-221ENST00000638141 GBP1P32455 592 aa13.15□□□□□ -0.3
CAPN3-221ENST00000638141 CASP7P55210 303 aa13.15□□□□□ -0.3
CAPN3-221ENST00000638141 MAGOHP61326 146 aaKnown RBP13.15□□□□□ -0.3
CAPN3-221ENST00000638141 C1orf141Q5JVX7 400 aa13.15□□□□□ -0.3
CAPN3-221ENST00000638141 SPICE1Q8N0Z3 855 aa13.15□□□□□ -0.3
CAPN3-221ENST00000638141 IGDCC4Q8TDY8 1250 aa13.15□□□□□ -0.3
CAPN3-221ENST00000638141 SH3TC2Q8TF17 1288 aa13.15□□□□□ -0.3
CAPN3-221ENST00000638141 MAIP1Q8WWC4 291 aa13.15□□□□□ -0.3
CAPN3-221ENST00000638141 ATXN2LQ8WWM7 1075 aaKnown RBP13.15□□□□□ -0.3
CAPN3-221ENST00000638141 KIFAP3Q92845 792 aa13.15□□□□□ -0.3
CAPN3-221ENST00000638141 MAGOHBQ96A72 148 aaKnown RBP13.15□□□□□ -0.3
CAPN3-221ENST00000638141 LY9Q9HBG7 655 aa13.15□□□□□ -0.3
CAPN3-221ENST00000638141 DMAP1Q9NPF5 467 aaPredicted RBP13.15□□□□□ -0.3
CAPN3-221ENST00000638141 EXOC1Q9NV70 894 aa13.15□□□□□ -0.3
CAPN3-221ENST00000638141 MAGEC2Q9UBF1 373 aaPredicted RBP13.15□□□□□ -0.3
CAPN3-221ENST00000638141 GMEB1Q9Y692 573 aa13.15□□□□□ -0.3
CAPN3-221ENST00000638141 O00370 1275 aa13.15□□□□□ -0.3
CAPN3-221ENST00000638141 HIP1RO75146 1068 aa13.15□□□□□ -0.3
CAPN3-221ENST00000638141 TRIM21P19474 475 aaKnown RBP13.15□□□□□ -0.3
CAPN3-221ENST00000638141 SP100P23497 879 aaPredicted RBP13.15□□□□□ -0.3
CAPN3-221ENST00000638141 RXRBP28702 533 aa13.15□□□□□ -0.3
CAPN3-221ENST00000638141 COPS2P61201 443 aa13.15□□□□□ -0.3
CAPN3-221ENST00000638141 CYP27A1Q02318 531 aa13.15□□□□□ -0.3
CAPN3-221ENST00000638141 RAB11FIP4Q86YS3 637 aa13.15□□□□□ -0.3
CAPN3-221ENST00000638141 RBM17Q96I25 401 aaKnown RBP13.15□□□□□ -0.3
CAPN3-221ENST00000638141 NEUROD6Q96NK8 337 aa13.15□□□□□ -0.3
CAPN3-221ENST00000638141 NOX5Q96PH1 765 aa13.15□□□□□ -0.3
CAPN3-221ENST00000638141 ERGIC2Q96RQ1 377 aa13.15□□□□□ -0.3
CAPN3-221ENST00000638141 SYT15Q9BQS2 421 aa13.15□□□□□ -0.3
CAPN3-221ENST00000638141 FAM192AQ9GZU8 254 aa13.15□□□□□ -0.3
CAPN3-221ENST00000638141 ECT2Q9H8V3 914 aa13.15□□□□□ -0.3
CAPN3-221ENST00000638141 AGPAT5Q9NUQ2 364 aa13.15□□□□□ -0.3
CAPN3-221ENST00000638141 SMARCAL1Q9NZC9 954 aa13.15□□□□□ -0.3
CAPN3-221ENST00000638141 EHD2Q9NZN4 543 aa13.15□□□□□ -0.3
CAPN3-221ENST00000638141 TMCO1Q9UM00 188 aa13.15□□□□□ -0.3
CAPN3-221ENST00000638141 XDHP47989 1333 aa13.15□□□□□ -0.3
CAPN3-221ENST00000638141 SART1O43290 800 aaKnown RBP13.14□□□□□ -0.31
CAPN3-221ENST00000638141 UBOX5O94941 541 aa13.14□□□□□ -0.31
CAPN3-221ENST00000638141 MYL1P05976 194 aa13.14□□□□□ -0.31
CAPN3-221ENST00000638141 MYH6P13533 1939 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms