RNA–Protein interactions for RNA: ENST00000636102.1

ARHGEF9-223, Transcript of Cdc42 guanine nucleotide exchange factor 9, human

TSL 5

Gene ARHGEF9, Length 2,112 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARHGEF9-223	ENST00000636102	AKR1B15	C9JRZ8	316 aa	Predicted RBP	11.88	□□□□□ -0.51
ARHGEF9-223	ENST00000636102	ANKRD65	E5RJM6	399 aa		11.88	□□□□□ -0.51
ARHGEF9-223	ENST00000636102	KIF3C	O14782	793 aa		11.88	□□□□□ -0.51
ARHGEF9-223	ENST00000636102	PPP1R12A	O14974	1030 aa	Predicted RBP	11.88	□□□□□ -0.51
ARHGEF9-223	ENST00000636102	ADAMTS3	O15072	1205 aa		11.88	□□□□□ -0.51
ARHGEF9-223	ENST00000636102	KIF5C	O60282	957 aa		11.88	□□□□□ -0.51
ARHGEF9-223	ENST00000636102	MYL1	P05976	194 aa		11.88	□□□□□ -0.51
ARHGEF9-223	ENST00000636102	LONP1	P36776	959 aa	Known RBP	11.88	□□□□□ -0.51
ARHGEF9-223	ENST00000636102	VSNL1	P62760	191 aa		11.88	□□□□□ -0.51
ARHGEF9-223	ENST00000636102	FMR1	Q06787	632 aa	Known RBP eCLIP	11.88	□□□□□ -0.51
ARHGEF9-223	ENST00000636102	DPYD	Q12882	1025 aa		11.88	□□□□□ -0.51
ARHGEF9-223	ENST00000636102	WWC2	Q6AWC2	1192 aa		11.88	□□□□□ -0.51
ARHGEF9-223	ENST00000636102	EP400NL	Q6ZTU2	488 aa		11.88	□□□□□ -0.51
ARHGEF9-223	ENST00000636102	TOGARAM2	Q6ZUX3	1019 aa		11.88	□□□□□ -0.51
ARHGEF9-223	ENST00000636102	HEATR3	Q7Z4Q2	680 aa		11.88	□□□□□ -0.51
ARHGEF9-223	ENST00000636102	TC2N	Q8N9U0	490 aa		11.88	□□□□□ -0.51
ARHGEF9-223	ENST00000636102	SYMPK	Q92797	1274 aa	Known RBP	11.88	□□□□□ -0.51
ARHGEF9-223	ENST00000636102	HOOK2	Q96ED9	719 aa		11.88	□□□□□ -0.51
ARHGEF9-223	ENST00000636102	GMCL1	Q96IK5	515 aa		11.88	□□□□□ -0.51
ARHGEF9-223	ENST00000636102	WRNIP1	Q96S55	665 aa		11.88	□□□□□ -0.51
ARHGEF9-223	ENST00000636102	INTS13	Q9NVM9	706 aa		11.88	□□□□□ -0.51
ARHGEF9-223	ENST00000636102	KCNG1	Q9UIX4	513 aa		11.88	□□□□□ -0.51
ARHGEF9-223	ENST00000636102	FAM169A	Q9Y6X4	670 aa		11.88	□□□□□ -0.51
ARHGEF9-223	ENST00000636102	ITIH6	Q6UXX5	1313 aa		11.88	□□□□□ -0.51
ARHGEF9-223	ENST00000636102	TMEM232	C9JQI7	657 aa		11.87	□□□□□ -0.51
ARHGEF9-223	ENST00000636102	USP2	O75604	605 aa	Predicted RBP	11.87	□□□□□ -0.51
ARHGEF9-223	ENST00000636102	SYF2	O95926	243 aa	Known RBP	11.87	□□□□□ -0.51
ARHGEF9-223	ENST00000636102	BMP3	P12645	472 aa		11.87	□□□□□ -0.51
ARHGEF9-223	ENST00000636102	NLRP5	P59047	1200 aa		11.87	□□□□□ -0.51
ARHGEF9-223	ENST00000636102	NPY5R	Q15761	445 aa		11.87	□□□□□ -0.51
ARHGEF9-223	ENST00000636102	MAP9	Q49MG5	647 aa		11.87	□□□□□ -0.51
ARHGEF9-223	ENST00000636102	PPFIBP1	Q86W92	1011 aa		11.87	□□□□□ -0.51
ARHGEF9-223	ENST00000636102	PDILT	Q8N807	584 aa		11.87	□□□□□ -0.51
ARHGEF9-223	ENST00000636102	KLRG1	Q96E93	195 aa		11.87	□□□□□ -0.51
ARHGEF9-223	ENST00000636102	SYNRG	Q9UMZ2	1314 aa		11.87	□□□□□ -0.51
ARHGEF9-223	ENST00000636102	CTAGE15	A4D2H0	777 aa		11.87	□□□□□ -0.51
ARHGEF9-223	ENST00000636102	LRRIQ3	A6PVS8	624 aa	Predicted RBP	11.87	□□□□□ -0.51
ARHGEF9-223	ENST00000636102	TMCO5B	A8MYB1	307 aa		11.87	□□□□□ -0.51
ARHGEF9-223	ENST00000636102	GTPBP6	O43824	516 aa	Predicted RBP	11.87	□□□□□ -0.51
ARHGEF9-223	ENST00000636102	CTAGE8	P0CG41	777 aa		11.87	□□□□□ -0.51
ARHGEF9-223	ENST00000636102	LIG3	P49916	1009 aa		11.87	□□□□□ -0.51
ARHGEF9-223	ENST00000636102	CUL4B	Q13620	913 aa		11.87	□□□□□ -0.51
ARHGEF9-223	ENST00000636102	TRIM14	Q14142	442 aa		11.87	□□□□□ -0.51
ARHGEF9-223	ENST00000636102	CDKAL1	Q5VV42	579 aa		11.87	□□□□□ -0.51
ARHGEF9-223	ENST00000636102	GBP6	Q6ZN66	633 aa		11.87	□□□□□ -0.51
ARHGEF9-223	ENST00000636102	CTAGE6	Q86UF2	777 aa		11.87	□□□□□ -0.51
ARHGEF9-223	ENST00000636102	SPATS2	Q86XZ4	545 aa	Known RBP	11.87	□□□□□ -0.51
ARHGEF9-223	ENST00000636102	CTAGE4	Q8IX94	777 aa		11.87	□□□□□ -0.51
ARHGEF9-223	ENST00000636102	ZC3H15	Q8WU90	426 aa	Known RBP	11.87	□□□□□ -0.51
ARHGEF9-223	ENST00000636102	CABS1	Q96KC9	395 aa		11.87	□□□□□ -0.51
ARHGEF9-223	ENST00000636102	BARHL2	Q9NY43	387 aa		11.87	□□□□□ -0.51
ARHGEF9-223	ENST00000636102	SYNPO2	Q9UMS6	1093 aa		11.87	□□□□□ -0.51
ARHGEF9-223	ENST00000636102	DICER1	Q9UPY3	1922 aa	Known RBP	11.86	□□□□□ -0.51
ARHGEF9-223	ENST00000636102	IQCA1L	A6NCM1	817 aa		11.86	□□□□□ -0.51
ARHGEF9-223	ENST00000636102		A6NNZ2	444 aa		11.86	□□□□□ -0.51
ARHGEF9-223	ENST00000636102	STXBP3	O00186	592 aa		11.86	□□□□□ -0.51
ARHGEF9-223	ENST00000636102	LAD1	O00515	517 aa		11.86	□□□□□ -0.51
ARHGEF9-223	ENST00000636102	POTEI	P0CG38	1075 aa		11.86	□□□□□ -0.51
ARHGEF9-223	ENST00000636102	POTEJ	P0CG39	1038 aa		11.86	□□□□□ -0.51
ARHGEF9-223	ENST00000636102	SNAP25	P60880	206 aa		11.86	□□□□□ -0.51
ARHGEF9-223	ENST00000636102	PTGDR	Q13258	359 aa		11.86	□□□□□ -0.51
ARHGEF9-223	ENST00000636102	DGKZ	Q13574	1117 aa		11.86	□□□□□ -0.51
ARHGEF9-223	ENST00000636102	NEDD9	Q14511	834 aa		11.86	□□□□□ -0.51
ARHGEF9-223	ENST00000636102	TUBB8	Q3ZCM7	444 aa		11.86	□□□□□ -0.51
ARHGEF9-223	ENST00000636102	EARS2	Q5JPH6	523 aa	Known RBP	11.86	□□□□□ -0.51
ARHGEF9-223	ENST00000636102	CNGA4	Q8IV77	575 aa		11.86	□□□□□ -0.51
ARHGEF9-223	ENST00000636102	SCYL3	Q8IZE3	742 aa		11.86	□□□□□ -0.51
ARHGEF9-223	ENST00000636102	CCDC148	Q8NFR7	591 aa		11.86	□□□□□ -0.51
ARHGEF9-223	ENST00000636102	GIMAP7	Q8NHV1	300 aa		11.86	□□□□□ -0.51
ARHGEF9-223	ENST00000636102	VCPKMT	Q9H867	229 aa		11.86	□□□□□ -0.51
ARHGEF9-223	ENST00000636102	SUGCT	Q9HAC7	445 aa		11.86	□□□□□ -0.51
ARHGEF9-223	ENST00000636102	GOPC	Q9HD26	462 aa		11.86	□□□□□ -0.51
ARHGEF9-223	ENST00000636102	SEC63	Q9UGP8	760 aa	Known RBP	11.86	□□□□□ -0.51
ARHGEF9-223	ENST00000636102	PUF60	Q9UHX1	559 aa	Known RBP	11.86	□□□□□ -0.51
ARHGEF9-223	ENST00000636102	CTAGE9	A4FU28	777 aa		11.86	□□□□□ -0.51
ARHGEF9-223	ENST00000636102	LRRC10B	A6NIK2	292 aa		11.86	□□□□□ -0.51
ARHGEF9-223	ENST00000636102	PPP1R11	O60927	126 aa	Predicted RBP	11.86	□□□□□ -0.51
ARHGEF9-223	ENST00000636102	PHACTR2	O75167	634 aa		11.86	□□□□□ -0.51
ARHGEF9-223	ENST00000636102	FAM83B	Q5T0W9	1011 aa		11.86	□□□□□ -0.51
ARHGEF9-223	ENST00000636102	EGFL6	Q8IUX8	553 aa		11.86	□□□□□ -0.51
ARHGEF9-223	ENST00000636102	DAGLB	Q8NCG7	672 aa		11.86	□□□□□ -0.51
ARHGEF9-223	ENST00000636102	COA7	Q96BR5	231 aa		11.86	□□□□□ -0.51
ARHGEF9-223	ENST00000636102	EPSTI1	Q96J88	318 aa		11.86	□□□□□ -0.51
ARHGEF9-223	ENST00000636102	ADD3	Q9UEY8	706 aa	Known RBP	11.86	□□□□□ -0.51
ARHGEF9-223	ENST00000636102	RWDD2A	Q9UIY3	292 aa		11.86	□□□□□ -0.51
ARHGEF9-223	ENST00000636102	SSC5D	A1L4H1	1573 aa		11.85	□□□□□ -0.51
ARHGEF9-223	ENST00000636102	PNMA6F	A0A0J9YX94	578 aa		11.85	□□□□□ -0.51
ARHGEF9-223	ENST00000636102	FAM205C	A6NFA0	338 aa		11.85	□□□□□ -0.51
ARHGEF9-223	ENST00000636102	PTPRA	P18433	802 aa		11.85	□□□□□ -0.51
ARHGEF9-223	ENST00000636102	ERCC3	P19447	782 aa		11.85	□□□□□ -0.51
ARHGEF9-223	ENST00000636102	SPP2	Q13103	211 aa		11.85	□□□□□ -0.51
ARHGEF9-223	ENST00000636102	IK	Q13123	557 aa	Predicted RBP	11.85	□□□□□ -0.51
ARHGEF9-223	ENST00000636102	ZNF174	Q15697	407 aa		11.85	□□□□□ -0.51
ARHGEF9-223	ENST00000636102	USP49	Q70CQ1	688 aa		11.85	□□□□□ -0.51
ARHGEF9-223	ENST00000636102	PNMA8A	Q86V59	439 aa	Predicted RBP	11.85	□□□□□ -0.51
ARHGEF9-223	ENST00000636102	MTMR8	Q96EF0	704 aa		11.85	□□□□□ -0.51
ARHGEF9-223	ENST00000636102	ZSWIM4	Q9H7M6	989 aa		11.85	□□□□□ -0.51
ARHGEF9-223	ENST00000636102	MRPL44	Q9H9J2	332 aa	Known RBP	11.85	□□□□□ -0.51
ARHGEF9-223	ENST00000636102	RRAGC	Q9HB90	399 aa		11.85	□□□□□ -0.51
ARHGEF9-223	ENST00000636102	PICK1	Q9NRD5	415 aa		11.85	□□□□□ -0.51

Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms