RNA–Protein interactions for RNA: ENST00000635828.1

CDKL5-209, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5 BASIC

Gene CDKL5, Length 3,823 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-209ENST00000635828 TXNP10599 105 aaKnown RBP9.7□□□□□ -0.86
CDKL5-209ENST00000635828 MTMR1Q13613 665 aa9.7□□□□□ -0.86
CDKL5-209ENST00000635828 DIS3LQ8TF46 1054 aaKnown RBP9.7□□□□□ -0.86
CDKL5-209ENST00000635828 INPP4AQ96PE3 977 aaPredicted RBP9.7□□□□□ -0.86
CDKL5-209ENST00000635828 DIS3Q9Y2L1 958 aaKnown RBP9.7□□□□□ -0.86
CDKL5-209ENST00000635828 UBIAD1Q9Y5Z9 338 aa9.7□□□□□ -0.86
CDKL5-209ENST00000635828 CCND2P30279 289 aa9.7□□□□□ -0.86
CDKL5-209ENST00000635828 AP3B2Q13367 1082 aa9.7□□□□□ -0.86
CDKL5-209ENST00000635828 CEP55Q53EZ4 464 aa9.7□□□□□ -0.86
CDKL5-209ENST00000635828 TRIM50Q86XT4 487 aa9.7□□□□□ -0.86
CDKL5-209ENST00000635828 SLAIN1Q8ND83 568 aa9.7□□□□□ -0.86
CDKL5-209ENST00000635828 ZBTB10Q96DT7 871 aa9.7□□□□□ -0.86
CDKL5-209ENST00000635828 IPO9Q96P70 1041 aaKnown RBP9.7□□□□□ -0.86
CDKL5-209ENST00000635828 MXRA8Q9BRK3 442 aa9.7□□□□□ -0.86
CDKL5-209ENST00000635828 FOXP1Q9H334 677 aaPredicted RBP9.7□□□□□ -0.86
CDKL5-209ENST00000635828 ABHD16BQ9H3Z7 469 aa9.7□□□□□ -0.86
CDKL5-209ENST00000635828 CNPY2Q9Y2B0 182 aa9.7□□□□□ -0.86
CDKL5-209ENST00000635828 SYNGAP1Q96PV0 1343 aa9.7□□□□□ -0.86
CDKL5-209ENST00000635828 DYNC1LI2O43237 492 aaPredicted RBP9.69□□□□□ -0.86
CDKL5-209ENST00000635828 CHMP2AO43633 222 aa9.69□□□□□ -0.86
CDKL5-209ENST00000635828 EIF3JO75822 258 aaKnown RBP9.69□□□□□ -0.86
CDKL5-209ENST00000635828 EN2P19622 333 aaPredicted RBP9.69□□□□□ -0.86
CDKL5-209ENST00000635828 ZNF76P36508 570 aa9.69□□□□□ -0.86
CDKL5-209ENST00000635828 ZNF467Q7Z7K2 595 aaPredicted RBP9.69□□□□□ -0.86
CDKL5-209ENST00000635828 NEK8Q86SG6 692 aa9.69□□□□□ -0.86
CDKL5-209ENST00000635828 SH2D3AQ9BRG2 576 aa9.69□□□□□ -0.86
CDKL5-209ENST00000635828 DDX41Q9UJV9 622 aaKnown RBP9.69□□□□□ -0.86
CDKL5-209ENST00000635828 GNEQ9Y223 722 aaKnown RBP9.69□□□□□ -0.86
CDKL5-209ENST00000635828 PRUNE2Q8WUY3 3088 aa9.69□□□□□ -0.86
CDKL5-209ENST00000635828 PP2D1A8MPX8 630 aa9.69□□□□□ -0.86
CDKL5-209ENST00000635828 MEIS1O00470 390 aa9.69□□□□□ -0.86
CDKL5-209ENST00000635828 DHX15O43143 795 aaKnown RBP9.69□□□□□ -0.86
CDKL5-209ENST00000635828 GNRH1P01148 92 aa9.69□□□□□ -0.86
CDKL5-209ENST00000635828 KCNA2P16389 499 aa9.69□□□□□ -0.86
CDKL5-209ENST00000635828 SOX10P56693 466 aa9.69□□□□□ -0.86
CDKL5-209ENST00000635828 CHMP4BP1P59074 171 aa9.69□□□□□ -0.86
CDKL5-209ENST00000635828 DNM1Q05193 864 aaKnown RBP9.69□□□□□ -0.86
CDKL5-209ENST00000635828 SPECC1Q5M775 1068 aa9.69□□□□□ -0.86
CDKL5-209ENST00000635828 BICD2Q8TD16 824 aa9.69□□□□□ -0.86
CDKL5-209ENST00000635828 USP28Q96RU2 1077 aa9.69□□□□□ -0.86
CDKL5-209ENST00000635828 DDX25Q9UHL0 483 aaKnown RBP9.69□□□□□ -0.86
CDKL5-209ENST00000635828 ASB14A6NK59 587 aa9.69□□□□□ -0.86
CDKL5-209ENST00000635828 CCNE2O96020 404 aa9.69□□□□□ -0.86
CDKL5-209ENST00000635828 F13A1P00488 732 aa9.69□□□□□ -0.86
CDKL5-209ENST00000635828 ZSCAN22P10073 491 aaPredicted RBP9.69□□□□□ -0.86
CDKL5-209ENST00000635828 TNFAIP2Q03169 654 aa9.69□□□□□ -0.86
CDKL5-209ENST00000635828 MYSM1Q5VVJ2 828 aa9.69□□□□□ -0.86
CDKL5-209ENST00000635828 MFSD14CQ5VZR4 134 aa9.69□□□□□ -0.86
CDKL5-209ENST00000635828 PLA2G4DQ86XP0 818 aa9.69□□□□□ -0.86
CDKL5-209ENST00000635828 JADE2Q9NQC1 790 aa9.69□□□□□ -0.86
CDKL5-209ENST00000635828 SYNRGQ9UMZ2 1314 aa9.68□□□□□ -0.86
CDKL5-209ENST00000635828 WDR81Q562E7 1941 aa9.68□□□□□ -0.86
CDKL5-209ENST00000635828 BRD1O95696 1058 aa9.68□□□□□ -0.86
CDKL5-209ENST00000635828 KRT25Q7Z3Z0 450 aa9.68□□□□□ -0.86
CDKL5-209ENST00000635828 C4orf32Q8N8J7 132 aa9.68□□□□□ -0.86
CDKL5-209ENST00000635828 ETNPPLQ8TBG4 499 aa9.68□□□□□ -0.86
CDKL5-209ENST00000635828 FERMT2Q96AC1 680 aa9.68□□□□□ -0.86
CDKL5-209ENST00000635828 IWS1Q96ST2 819 aa9.68□□□□□ -0.86
CDKL5-209ENST00000635828 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.68□□□□□ -0.86
CDKL5-209ENST00000635828 MAP3K20Q9NYL2 800 aaKnown RBP9.68□□□□□ -0.86
CDKL5-209ENST00000635828 TMEM150BA6NC51 233 aa9.68□□□□□ -0.86
CDKL5-209ENST00000635828 SPATA31C2B4DYI2 1134 aa9.68□□□□□ -0.86
CDKL5-209ENST00000635828 GGPS1O95749 300 aa9.68□□□□□ -0.86
CDKL5-209ENST00000635828 ZNF286BP0CG31 522 aa9.68□□□□□ -0.86
CDKL5-209ENST00000635828 MARCKSP29966 332 aaPredicted RBP9.68□□□□□ -0.86
CDKL5-209ENST00000635828 MNX1P50219 401 aaPredicted RBP9.68□□□□□ -0.86
CDKL5-209ENST00000635828 SAFBQ15424 915 aaKnown RBP eCLIP9.68□□□□□ -0.86
CDKL5-209ENST00000635828 AGO4Q9HCK5 861 aaKnown RBP9.68□□□□□ -0.86
CDKL5-209ENST00000635828 PAK6Q9NQU5 681 aaPredicted RBP9.68□□□□□ -0.86
CDKL5-209ENST00000635828 CHD7Q9P2D1 2997 aa9.68□□□□□ -0.86
CDKL5-209ENST00000635828 POTEMA6NI47 508 aa9.68□□□□□ -0.86
CDKL5-209ENST00000635828 EML1O00423 815 aa9.68□□□□□ -0.86
CDKL5-209ENST00000635828 ZBTB39O15060 712 aa9.68□□□□□ -0.86
CDKL5-209ENST00000635828 ARHGAP1Q07960 439 aa9.68□□□□□ -0.86
CDKL5-209ENST00000635828 AFG1LQ8WV93 481 aa9.68□□□□□ -0.86
CDKL5-209ENST00000635828 HMX1Q9NP08 348 aaPredicted RBP9.68□□□□□ -0.86
CDKL5-209ENST00000635828 SLC5A4Q9NY91 659 aa9.68□□□□□ -0.86
CDKL5-209ENST00000635828 PNMA2Q9UL42 364 aa9.68□□□□□ -0.86
CDKL5-209ENST00000635828 SEPT4O43236 478 aa9.67□□□□□ -0.86
CDKL5-209ENST00000635828 FOSP01100 380 aaPredicted RBP9.67□□□□□ -0.86
CDKL5-209ENST00000635828 CYP3A4P08684 503 aa9.67□□□□□ -0.86
CDKL5-209ENST00000635828 C6orf222P0C671 652 aaPredicted RBP9.67□□□□□ -0.86
CDKL5-209ENST00000635828 TXKP42681 527 aa9.67□□□□□ -0.86
CDKL5-209ENST00000635828 PTGDRQ13258 359 aa9.67□□□□□ -0.86
CDKL5-209ENST00000635828 SF3A1Q15459 793 aaKnown RBP9.67□□□□□ -0.86
CDKL5-209ENST00000635828 TTC38Q5R3I4 469 aa9.67□□□□□ -0.86
CDKL5-209ENST00000635828 TLK2Q86UE8 772 aa9.67□□□□□ -0.86
CDKL5-209ENST00000635828 BRMS1Q9HCU9 246 aa9.67□□□□□ -0.86
CDKL5-209ENST00000635828 WRAP73Q9P2S5 460 aaPredicted RBP9.67□□□□□ -0.86
CDKL5-209ENST00000635828 SPTBN5Q9NRC6 3674 aaKnown RBP9.67□□□□□ -0.86
CDKL5-209ENST00000635828 IPO5O00410 1097 aaKnown RBP9.67□□□□□ -0.86
CDKL5-209ENST00000635828 FARP2O94887 1054 aaPredicted RBP9.67□□□□□ -0.86
CDKL5-209ENST00000635828 TRAF1Q13077 416 aa9.67□□□□□ -0.86
CDKL5-209ENST00000635828 GALNT17Q6IS24 598 aa9.67□□□□□ -0.86
CDKL5-209ENST00000635828 USP49Q70CQ1 688 aa9.67□□□□□ -0.86
CDKL5-209ENST00000635828 CLIC6Q96NY7 704 aa9.67□□□□□ -0.86
CDKL5-209ENST00000635828 ZNF577Q9BSK1 485 aa9.67□□□□□ -0.86
CDKL5-209ENST00000635828 DDX20Q9UHI6 824 aaKnown RBP9.67□□□□□ -0.86
CDKL5-209ENST00000635828 PSMC6P62333 389 aa9.67□□□□□ -0.86
CDKL5-209ENST00000635828 U2AF1L4Q8WU68 220 aaKnown RBP9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms