RNA–Protein interactions for RNA: ENST00000633813.1

LINC00254-202, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 439 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-202ENST00000633813 STXBP3O00186 592 aa7.49□□□□□ -1.21
LINC00254-202ENST00000633813 FARP2O94887 1054 aaPredicted RBP7.49□□□□□ -1.21
LINC00254-202ENST00000633813 KCNH1O95259 989 aa7.49□□□□□ -1.21
LINC00254-202ENST00000633813 ARL4AP40617 200 aa7.49□□□□□ -1.21
LINC00254-202ENST00000633813 RBM10P98175 930 aaKnown RBP7.49□□□□□ -1.21
LINC00254-202ENST00000633813 RAB33AQ14088 237 aa7.49□□□□□ -1.21
LINC00254-202ENST00000633813 HSF5Q4G112 596 aaPredicted RBP7.49□□□□□ -1.21
LINC00254-202ENST00000633813 OGFOD2Q6N063 350 aa7.49□□□□□ -1.21
LINC00254-202ENST00000633813 NLRX1Q86UT6 975 aa7.49□□□□□ -1.21
LINC00254-202ENST00000633813 IRF2BP1Q8IU81 584 aa7.49□□□□□ -1.21
LINC00254-202ENST00000633813 ZNF513Q8N8E2 541 aaPredicted RBP7.49□□□□□ -1.21
LINC00254-202ENST00000633813 INTS4Q96HW7 963 aaKnown RBP7.49□□□□□ -1.21
LINC00254-202ENST00000633813 PTCHD1Q96NR3 888 aa7.49□□□□□ -1.21
LINC00254-202ENST00000633813 CRTAC1Q9NQ79 661 aa7.49□□□□□ -1.21
LINC00254-202ENST00000633813 ST7Q9NRC1 585 aa7.49□□□□□ -1.21
LINC00254-202ENST00000633813 TERF2IPQ9NYB0 399 aa7.49□□□□□ -1.21
LINC00254-202ENST00000633813 ANKRD36BQ8N2N9 1353 aa7.48□□□□□ -1.21
LINC00254-202ENST00000633813 TRBV23OR9-2A0A075B6M9 112 aa7.48□□□□□ -1.21
LINC00254-202ENST00000633813 C2orf71A6NGG8 1288 aa7.48□□□□□ -1.21
LINC00254-202ENST00000633813 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.48□□□□□ -1.21
LINC00254-202ENST00000633813 GTF2F1P35269 517 aaKnown RBP eCLIP7.48□□□□□ -1.21
LINC00254-202ENST00000633813 NBPF6Q5VWK0 638 aa7.48□□□□□ -1.21
LINC00254-202ENST00000633813 HDGFL2Q7Z4V5 671 aaPredicted RBP7.48□□□□□ -1.21
LINC00254-202ENST00000633813 SLCO6A1Q86UG4 719 aa7.48□□□□□ -1.21
LINC00254-202ENST00000633813 TRIM59Q8IWR1 403 aa7.48□□□□□ -1.21
LINC00254-202ENST00000633813 XRN1Q8IZH2 1706 aaKnown RBP7.48□□□□□ -1.21
LINC00254-202ENST00000633813 MICAL1Q8TDZ2 1067 aa7.48□□□□□ -1.21
LINC00254-202ENST00000633813 NBPF4Q96M43 638 aa7.48□□□□□ -1.21
LINC00254-202ENST00000633813 NOTOA8MTQ0 251 aa7.47□□□□□ -1.21
LINC00254-202ENST00000633813 PDE6BP35913 854 aa7.47□□□□□ -1.21
LINC00254-202ENST00000633813 MRM1Q6IN84 353 aaKnown RBP7.47□□□□□ -1.21
LINC00254-202ENST00000633813 PRR23BQ6ZRT6 265 aa7.47□□□□□ -1.21
LINC00254-202ENST00000633813 POU5F2Q8N7G0 328 aa7.47□□□□□ -1.21
LINC00254-202ENST00000633813 CELF2-AS1Q8N7Q2 184 aa7.47□□□□□ -1.21
LINC00254-202ENST00000633813 DIRC2Q96SL1 478 aa7.47□□□□□ -1.21
LINC00254-202ENST00000633813 SLC38A3Q99624 504 aa7.47□□□□□ -1.21
LINC00254-202ENST00000633813 EPB41L4BQ9H329 900 aa7.47□□□□□ -1.21
LINC00254-202ENST00000633813 NSUN3Q9H649 340 aaKnown RBP7.47□□□□□ -1.21
LINC00254-202ENST00000633813 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.47□□□□□ -1.21
LINC00254-202ENST00000633813 CHD2O14647 1828 aaKnown RBP7.47□□□□□ -1.21
LINC00254-202ENST00000633813 ADGRB2O60241 1585 aa7.46□□□□□ -1.21
LINC00254-202ENST00000633813 NCOA3Q9Y6Q9 1424 aa7.46□□□□□ -1.21
LINC00254-202ENST00000633813 PNLIPP16233 465 aa7.46□□□□□ -1.22
LINC00254-202ENST00000633813 PRKCAP17252 672 aa7.46□□□□□ -1.22
LINC00254-202ENST00000633813 LAPTM5Q13571 262 aa7.46□□□□□ -1.22
LINC00254-202ENST00000633813 CC2D1BQ5T0F9 858 aaKnown RBP7.46□□□□□ -1.22
LINC00254-202ENST00000633813 SIRT2Q8IXJ6 389 aa7.46□□□□□ -1.22
LINC00254-202ENST00000633813 TMEM52Q8NDY8 209 aa7.46□□□□□ -1.22
LINC00254-202ENST00000633813 NUP43Q8NFH3 380 aa7.46□□□□□ -1.22
LINC00254-202ENST00000633813 SHISA4Q96DD7 197 aa7.46□□□□□ -1.22
LINC00254-202ENST00000633813 FAM84AQ96KN4 292 aa7.46□□□□□ -1.22
LINC00254-202ENST00000633813 JMJD8Q96S16 334 aa7.46□□□□□ -1.22
LINC00254-202ENST00000633813 MCMBPQ9BTE3 642 aa7.46□□□□□ -1.22
LINC00254-202ENST00000633813 DCP1AQ9NPI6 582 aaPredicted RBP7.46□□□□□ -1.22
LINC00254-202ENST00000633813 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.46□□□□□ -1.22
LINC00254-202ENST00000633813 CGNL1Q0VF96 1302 aa7.46□□□□□ -1.22
LINC00254-202ENST00000633813 MYBBP1AQ9BQG0 1328 aaKnown RBP7.46□□□□□ -1.22
LINC00254-202ENST00000633813 PARD3Q8TEW0 1356 aa7.46□□□□□ -1.22
LINC00254-202ENST00000633813 MYOM1P52179 1685 aa7.45□□□□□ -1.22
LINC00254-202ENST00000633813 NKTRP30414 1462 aaKnown RBP7.45□□□□□ -1.22
LINC00254-202ENST00000633813 OR14I1A6ND48 311 aa7.45□□□□□ -1.22
LINC00254-202ENST00000633813 PAMP19021 973 aa7.45□□□□□ -1.22
LINC00254-202ENST00000633813 L1CAMP32004 1257 aa7.45□□□□□ -1.22
LINC00254-202ENST00000633813 CYP4F8P98187 520 aa7.45□□□□□ -1.22
LINC00254-202ENST00000633813 CNGB1Q14028 1251 aaPredicted RBP7.45□□□□□ -1.22
LINC00254-202ENST00000633813 ADGRF1Q5T601 910 aa7.45□□□□□ -1.22
LINC00254-202ENST00000633813 GTF2IRD2BQ6EKJ0 949 aa7.45□□□□□ -1.22
LINC00254-202ENST00000633813 GTF2IRD2Q86UP8 949 aa7.45□□□□□ -1.22
LINC00254-202ENST00000633813 FBXO15Q8NCQ5 510 aaPredicted RBP7.45□□□□□ -1.22
LINC00254-202ENST00000633813 MRGPRX3Q96LB0 322 aa7.45□□□□□ -1.22
LINC00254-202ENST00000633813 PLCD4Q9BRC7 762 aa7.45□□□□□ -1.22
LINC00254-202ENST00000633813 CYP26B1Q9NR63 512 aa7.45□□□□□ -1.22
LINC00254-202ENST00000633813 IMPACTQ9P2X3 320 aa7.45□□□□□ -1.22
LINC00254-202ENST00000633813 ACSL6Q9UKU0 697 aa7.45□□□□□ -1.22
LINC00254-202ENST00000633813 NWD1Q149M9 1564 aa7.45□□□□□ -1.22
LINC00254-202ENST00000633813 A0A1W2PP64 1363 aa7.45□□□□□ -1.22
LINC00254-202ENST00000633813 CPSF1Q10570 1443 aaKnown RBP7.44□□□□□ -1.22
LINC00254-202ENST00000633813 PPIP5K1Q6PFW1 1433 aa7.44□□□□□ -1.22
LINC00254-202ENST00000633813 NSD3Q9BZ95 1437 aa7.44□□□□□ -1.22
LINC00254-202ENST00000633813 ATP7BP35670 1465 aa7.44□□□□□ -1.22
LINC00254-202ENST00000633813 CD163L1Q9NR16 1453 aa7.44□□□□□ -1.22
LINC00254-202ENST00000633813 A0A1W2PQJ5 194 aa7.44□□□□□ -1.22
LINC00254-202ENST00000633813 IQCA1LA6NCM1 817 aa7.44□□□□□ -1.22
LINC00254-202ENST00000633813 ITGAVP06756 1048 aa7.44□□□□□ -1.22
LINC00254-202ENST00000633813 CORO7P57737 925 aa7.44□□□□□ -1.22
LINC00254-202ENST00000633813 SCRN1Q12765 414 aa7.44□□□□□ -1.22
LINC00254-202ENST00000633813 SLC10A6Q3KNW5 377 aa7.44□□□□□ -1.22
LINC00254-202ENST00000633813 ZNF227Q86WZ6 799 aa7.44□□□□□ -1.22
LINC00254-202ENST00000633813 ST13P5Q8NFI4 369 aaPredicted RBP7.44□□□□□ -1.22
LINC00254-202ENST00000633813 CCDC140Q96MF4 163 aa7.44□□□□□ -1.22
LINC00254-202ENST00000633813 NKX2-4Q9H2Z4 354 aa7.44□□□□□ -1.22
LINC00254-202ENST00000633813 NSD2O96028 1365 aa7.44□□□□□ -1.22
LINC00254-202ENST00000633813 ANKARQ7Z5J8 1434 aa7.44□□□□□ -1.22
LINC00254-202ENST00000633813 ADGRL3Q9HAR2 1447 aa7.44□□□□□ -1.22
LINC00254-202ENST00000633813 STRCQ7RTU9 1775 aa7.43□□□□□ -1.22
LINC00254-202ENST00000633813 NPHP3-ACAD11A0A0J9YXS1 232 aa7.43□□□□□ -1.22
LINC00254-202ENST00000633813 FYB1O15117 783 aa7.43□□□□□ -1.22
LINC00254-202ENST00000633813 HOXC12P31275 282 aa7.43□□□□□ -1.22
LINC00254-202ENST00000633813 GALK1P51570 392 aa7.43□□□□□ -1.22
LINC00254-202ENST00000633813 TMEM62Q0P6H9 643 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms