RNA–Protein interactions for RNA: ENST00000632758.1

LIMS4-203, Transcript of LIM zinc finger domain containing 4, humanhuman

TSL 1 (best)

Gene LIMS4, Length 1,580 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-203ENST00000632758 TCHHQ07283 1943 aa16.72■□□□□ 0.27
LIMS4-203ENST00000632758 MYH15Q9Y2K3 1946 aa16.72■□□□□ 0.27
LIMS4-203ENST00000632758 ELP1O95163 1332 aa16.72■□□□□ 0.27
LIMS4-203ENST00000632758 VWA3AA6NCI4 1184 aa16.72■□□□□ 0.27
LIMS4-203ENST00000632758 B4DLN1 442 aa16.72■□□□□ 0.27
LIMS4-203ENST00000632758 STAM2O75886 525 aa16.72■□□□□ 0.27
LIMS4-203ENST00000632758 SPECC1Q5M775 1068 aa16.72■□□□□ 0.27
LIMS4-203ENST00000632758 NLRX1Q86UT6 975 aa16.72■□□□□ 0.27
LIMS4-203ENST00000632758 KRI1Q8N9T8 703 aaKnown RBP16.72■□□□□ 0.27
LIMS4-203ENST00000632758 MPHOSPH6Q99547 160 aaKnown RBP16.72■□□□□ 0.27
LIMS4-203ENST00000632758 ZNF577Q9BSK1 485 aa16.72■□□□□ 0.27
LIMS4-203ENST00000632758 AGO4Q9HCK5 861 aaKnown RBP16.72■□□□□ 0.27
LIMS4-203ENST00000632758 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.72■□□□□ 0.27
LIMS4-203ENST00000632758 MORC2Q9Y6X9 1032 aaPredicted RBP16.72■□□□□ 0.27
LIMS4-203ENST00000632758 DOCK3Q8IZD9 2030 aa16.71■□□□□ 0.27
LIMS4-203ENST00000632758 LOC102724159A0A0B4J2E5 919 aa16.71■□□□□ 0.27
LIMS4-203ENST00000632758 LAD1O00515 517 aa16.71■□□□□ 0.27
LIMS4-203ENST00000632758 PRPHP41219 470 aa16.71■□□□□ 0.27
LIMS4-203ENST00000632758 TECP42680 631 aa16.71■□□□□ 0.27
LIMS4-203ENST00000632758 SETQ01105 290 aaPredicted RBP16.71■□□□□ 0.27
LIMS4-203ENST00000632758 PWP2Q15269 919 aaKnown RBP16.71■□□□□ 0.27
LIMS4-203ENST00000632758 NFKBIBQ15653 356 aa16.71■□□□□ 0.27
LIMS4-203ENST00000632758 CSPP1Q1MSJ5 1256 aa16.71■□□□□ 0.27
LIMS4-203ENST00000632758 ARL6IP4Q66PJ3 421 aaKnown RBP16.71■□□□□ 0.27
LIMS4-203ENST00000632758 DTHD1Q6ZMT9 781 aa16.71■□□□□ 0.27
LIMS4-203ENST00000632758 FBXO16Q8IX29 292 aaPredicted RBP16.71■□□□□ 0.27
LIMS4-203ENST00000632758 GPRASP2Q96D09 838 aa16.71■□□□□ 0.27
LIMS4-203ENST00000632758 ERO1AQ96HE7 468 aa16.71■□□□□ 0.27
LIMS4-203ENST00000632758 APBA2Q99767 749 aa16.71■□□□□ 0.27
LIMS4-203ENST00000632758 CSRNP2Q9H175 543 aa16.71■□□□□ 0.27
LIMS4-203ENST00000632758 BCAS3Q9H6U6 928 aa16.71■□□□□ 0.27
LIMS4-203ENST00000632758 TTC12Q9H892 705 aaPredicted RBP16.71■□□□□ 0.27
LIMS4-203ENST00000632758 PDGFCQ9NRA1 345 aa16.71■□□□□ 0.27
LIMS4-203ENST00000632758 SPATA31C2B4DYI2 1134 aa16.7■□□□□ 0.26
LIMS4-203ENST00000632758 TBX3O15119 743 aa16.7■□□□□ 0.26
LIMS4-203ENST00000632758 CYP2C19P33261 490 aa16.7■□□□□ 0.26
LIMS4-203ENST00000632758 SP2Q02086 613 aa16.7■□□□□ 0.26
LIMS4-203ENST00000632758 ITGB3BPQ13352 177 aaPredicted RBP16.7■□□□□ 0.26
LIMS4-203ENST00000632758 PRAMEF19Q5SWL8 479 aa16.7■□□□□ 0.26
LIMS4-203ENST00000632758 TMEM63BQ5T3F8 832 aa16.7■□□□□ 0.26
LIMS4-203ENST00000632758 JMYQ8N9B5 988 aa16.7■□□□□ 0.26
LIMS4-203ENST00000632758 SLC5A5Q92911 643 aa16.7■□□□□ 0.26
LIMS4-203ENST00000632758 FAM20AQ96MK3 541 aa16.7■□□□□ 0.26
LIMS4-203ENST00000632758 KATNBL1Q9H079 304 aa16.7■□□□□ 0.26
LIMS4-203ENST00000632758 SRRDQ9UH36 339 aa16.7■□□□□ 0.26
LIMS4-203ENST00000632758 PCDHA12Q9UN75 941 aa16.7■□□□□ 0.26
LIMS4-203ENST00000632758 GOLGA6L22H0YM25 854 aa16.69■□□□□ 0.26
LIMS4-203ENST00000632758 IPO5O00410 1097 aaKnown RBP16.69■□□□□ 0.26
LIMS4-203ENST00000632758 DHX15O43143 795 aaKnown RBP16.69■□□□□ 0.26
LIMS4-203ENST00000632758 CUTAO60888 179 aa16.69■□□□□ 0.26
LIMS4-203ENST00000632758 PSMD10O75832 226 aa16.69■□□□□ 0.26
LIMS4-203ENST00000632758 IGHA2P01877 340 aa16.69■□□□□ 0.26
LIMS4-203ENST00000632758 CDC25AP30304 524 aa16.69■□□□□ 0.26
LIMS4-203ENST00000632758 ICAM3P32942 547 aa16.69■□□□□ 0.26
LIMS4-203ENST00000632758 GNPTABQ3T906 1256 aa16.69■□□□□ 0.26
LIMS4-203ENST00000632758 ADALQ6DHV7 355 aa16.69■□□□□ 0.26
LIMS4-203ENST00000632758 SHC4Q6S5L8 630 aa16.69■□□□□ 0.26
LIMS4-203ENST00000632758 USP49Q70CQ1 688 aa16.69■□□□□ 0.26
LIMS4-203ENST00000632758 FERMT2Q96AC1 680 aa16.69■□□□□ 0.26
LIMS4-203ENST00000632758 SYNGAP1Q96PV0 1343 aa16.69■□□□□ 0.26
LIMS4-203ENST00000632758 PP2D1A8MPX8 630 aa16.68■□□□□ 0.26
LIMS4-203ENST00000632758 DDX39AO00148 427 aaKnown RBP16.68■□□□□ 0.26
LIMS4-203ENST00000632758 MAFGO15525 162 aa16.68■□□□□ 0.26
LIMS4-203ENST00000632758 SORBS3O60504 671 aa16.68■□□□□ 0.26
LIMS4-203ENST00000632758 ARIH2O95376 493 aa16.68■□□□□ 0.26
LIMS4-203ENST00000632758 XRCC5P13010 732 aaKnown RBP16.68■□□□□ 0.26
LIMS4-203ENST00000632758 HOXD10P28358 340 aa16.68■□□□□ 0.26
LIMS4-203ENST00000632758 OLFML2BQ68BL8 750 aa16.68■□□□□ 0.26
LIMS4-203ENST00000632758 TAPT1Q6NXT6 567 aa16.68■□□□□ 0.26
LIMS4-203ENST00000632758 SLFN12Q8IYM2 578 aa16.68■□□□□ 0.26
LIMS4-203ENST00000632758 MSL3Q8N5Y2 521 aaKnown RBP16.68■□□□□ 0.26
LIMS4-203ENST00000632758 ZNF236Q9UL36 1845 aa16.68■□□□□ 0.26
LIMS4-203ENST00000632758 POTEMA6NI47 508 aa16.68■□□□□ 0.26
LIMS4-203ENST00000632758 KCNA2P16389 499 aa16.68■□□□□ 0.26
LIMS4-203ENST00000632758 FXR2P51116 673 aaKnown RBP eCLIP16.68■□□□□ 0.26
LIMS4-203ENST00000632758 ACVR2BQ13705 512 aa16.68■□□□□ 0.26
LIMS4-203ENST00000632758 LY6KQ17RY6 165 aa16.68■□□□□ 0.26
LIMS4-203ENST00000632758 LRCH2Q5VUJ6 765 aa16.68■□□□□ 0.26
LIMS4-203ENST00000632758 OTOP1Q7RTM1 612 aa16.68■□□□□ 0.26
LIMS4-203ENST00000632758 TRIB2Q92519 343 aa16.68■□□□□ 0.26
LIMS4-203ENST00000632758 EPSTI1Q96J88 318 aa16.68■□□□□ 0.26
LIMS4-203ENST00000632758 VAV3Q9UKW4 847 aa16.68■□□□□ 0.26
LIMS4-203ENST00000632758 TELO2Q9Y4R8 837 aa16.68■□□□□ 0.26
LIMS4-203ENST00000632758 GOLGA6L4A6NEF3 574 aa16.67■□□□□ 0.26
LIMS4-203ENST00000632758 GAS7O60861 476 aa16.67■□□□□ 0.26
LIMS4-203ENST00000632758 PTGS1P23219 599 aa16.67■□□□□ 0.26
LIMS4-203ENST00000632758 UBE2HP62256 183 aa16.67■□□□□ 0.26
LIMS4-203ENST00000632758 SPIRE1Q08AE8 756 aa16.67■□□□□ 0.26
LIMS4-203ENST00000632758 CCDC62Q6P9F0 684 aa16.67■□□□□ 0.26
LIMS4-203ENST00000632758 IGSF22Q8N9C0 903 aa16.67■□□□□ 0.26
LIMS4-203ENST00000632758 ZNF579Q8NAF0 562 aaKnown RBP16.67■□□□□ 0.26
LIMS4-203ENST00000632758 CDHR1Q96JP9 859 aa16.67■□□□□ 0.26
LIMS4-203ENST00000632758 RIT2Q99578 217 aa16.67■□□□□ 0.26
LIMS4-203ENST00000632758 ABHD16BQ9H3Z7 469 aa16.67■□□□□ 0.26
LIMS4-203ENST00000632758 GOLPH3LQ9H4A5 285 aa16.67■□□□□ 0.26
LIMS4-203ENST00000632758 VTA1Q9NP79 307 aa16.67■□□□□ 0.26
LIMS4-203ENST00000632758 DDX41Q9UJV9 622 aaKnown RBP16.67■□□□□ 0.26
LIMS4-203ENST00000632758 MGAMO43451 1857 aa16.66■□□□□ 0.26
LIMS4-203ENST00000632758 A0A1B0GVL5 298 aa16.66■□□□□ 0.26
LIMS4-203ENST00000632758 A0A1W2PQ27 194 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms