RNA–Protein interactions for RNA: ENST00000631023.2

CLN3-240, Transcript of CLN3, battenin, humanhuman

TSL 5 BASIC

Gene CLN3, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN3-240ENST00000631023 EMID1Q96A84 441 aaPredicted RBP23.68■■□□□ 1.38
CLN3-240ENST00000631023 CDHR1Q96JP9 859 aa23.68■■□□□ 1.38
CLN3-240ENST00000631023 ZSCAN31Q96LW9 406 aaPredicted RBP23.68■■□□□ 1.38
CLN3-240ENST00000631023 BACH2Q9BYV9 841 aa23.68■■□□□ 1.38
CLN3-240ENST00000631023 SPATA31C2B4DYI2 1134 aa23.67■■□□□ 1.38
CLN3-240ENST00000631023 ST18O60284 1047 aa23.67■■□□□ 1.38
CLN3-240ENST00000631023 LARGE1O95461 756 aa23.67■■□□□ 1.38
CLN3-240ENST00000631023 TBC1D32Q96NH3 1257 aa23.67■■□□□ 1.38
CLN3-240ENST00000631023 TMEM260Q9NX78 707 aa23.67■■□□□ 1.38
CLN3-240ENST00000631023 ATP11BQ9Y2G3 1177 aa23.67■■□□□ 1.38
CLN3-240ENST00000631023 MAFGO15525 162 aa23.66■■□□□ 1.38
CLN3-240ENST00000631023 MYL3P08590 195 aa23.66■■□□□ 1.38
CLN3-240ENST00000631023 NEDD9Q14511 834 aa23.66■■□□□ 1.38
CLN3-240ENST00000631023 GALNT17Q6IS24 598 aa23.66■■□□□ 1.38
CLN3-240ENST00000631023 AFG1LQ8WV93 481 aa23.66■■□□□ 1.38
CLN3-240ENST00000631023 GPRASP2Q96D09 838 aa23.66■■□□□ 1.38
CLN3-240ENST00000631023 ORC3Q9UBD5 711 aaPredicted RBP23.66■■□□□ 1.38
CLN3-240ENST00000631023 A0A0U1RQG5 324 aaPredicted RBP23.65■■□□□ 1.38
CLN3-240ENST00000631023 H0YGN5 161 aa23.65■■□□□ 1.38
CLN3-240ENST00000631023 CTDNEP1O95476 244 aa23.65■■□□□ 1.38
CLN3-240ENST00000631023 SREBF1P36956 1147 aa23.65■■□□□ 1.38
CLN3-240ENST00000631023 TRIM60Q495X7 471 aa23.65■■□□□ 1.38
CLN3-240ENST00000631023 CELF3Q5SZQ8 465 aaKnown RBP23.65■■□□□ 1.38
CLN3-240ENST00000631023 PGBD1Q96JS3 809 aa23.65■■□□□ 1.38
CLN3-240ENST00000631023 SEZ6LQ9BYH1 1024 aa23.65■■□□□ 1.38
CLN3-240ENST00000631023 MLXIPQ9HAP2 919 aa23.65■■□□□ 1.38
CLN3-240ENST00000631023 SH2B1Q9NRF2 756 aaPredicted RBP23.65■■□□□ 1.38
CLN3-240ENST00000631023 UBIAD1Q9Y5Z9 338 aa23.65■■□□□ 1.38
CLN3-240ENST00000631023 SCN10AQ9Y5Y9 1956 aa23.65■■□□□ 1.38
CLN3-240ENST00000631023 MROH7Q68CQ1 1323 aa23.65■■□□□ 1.38
CLN3-240ENST00000631023 GGPS1O95749 300 aa23.65■■□□□ 1.38
CLN3-240ENST00000631023 UBA1P22314 1058 aaKnown RBP23.65■■□□□ 1.38
CLN3-240ENST00000631023 PURAQ00577 322 aaKnown RBP23.65■■□□□ 1.38
CLN3-240ENST00000631023 SP2Q02086 613 aa23.65■■□□□ 1.38
CLN3-240ENST00000631023 MYSM1Q5VVJ2 828 aa23.65■■□□□ 1.38
CLN3-240ENST00000631023 GIMAP8Q8ND71 665 aaPredicted RBP23.65■■□□□ 1.38
CLN3-240ENST00000631023 PPTC7Q8NI37 304 aa23.65■■□□□ 1.38
CLN3-240ENST00000631023 SENP7Q9BQF6 1050 aa23.65■■□□□ 1.38
CLN3-240ENST00000631023 MTG1Q9BT17 334 aaPredicted RBP23.65■■□□□ 1.38
CLN3-240ENST00000631023 JADE2Q9NQC1 790 aa23.65■■□□□ 1.38
CLN3-240ENST00000631023 PCDHA4Q9UN74 947 aa23.65■■□□□ 1.38
CLN3-240ENST00000631023 ARVCFO00192 962 aa23.64■■□□□ 1.37
CLN3-240ENST00000631023 ZNF76P36508 570 aa23.64■■□□□ 1.37
CLN3-240ENST00000631023 MTMR1Q13613 665 aa23.64■■□□□ 1.37
CLN3-240ENST00000631023 DGKDQ16760 1214 aa23.64■■□□□ 1.37
CLN3-240ENST00000631023 SPATA33Q96N06 139 aa23.64■■□□□ 1.37
CLN3-240ENST00000631023 AIFM3Q96NN9 605 aa23.64■■□□□ 1.37
CLN3-240ENST00000631023 PRKAG2Q9UGJ0 569 aa23.64■■□□□ 1.37
CLN3-240ENST00000631023 MMP3P08254 477 aa23.63■■□□□ 1.37
CLN3-240ENST00000631023 ITGB5P18084 799 aa23.63■■□□□ 1.37
CLN3-240ENST00000631023 ARHGAP4P98171 946 aa23.63■■□□□ 1.37
CLN3-240ENST00000631023 TLE2Q04725 743 aa23.63■■□□□ 1.37
CLN3-240ENST00000631023 ITGA7Q13683 1181 aa23.63■■□□□ 1.37
CLN3-240ENST00000631023 MXRA8Q9BRK3 442 aa23.63■■□□□ 1.37
CLN3-240ENST00000631023 KAT6AQ92794 2004 aa23.62■■□□□ 1.37
CLN3-240ENST00000631023 DCDC2CA8MYV0 355 aa23.62■■□□□ 1.37
CLN3-240ENST00000631023 PQBP1O60828 265 aaKnown RBP23.62■■□□□ 1.37
CLN3-240ENST00000631023 CDK7P50613 346 aa23.62■■□□□ 1.37
CLN3-240ENST00000631023 SEMA3FQ13275 785 aa23.62■■□□□ 1.37
CLN3-240ENST00000631023 CEP55Q53EZ4 464 aa23.62■■□□□ 1.37
CLN3-240ENST00000631023 ANKRD33Q7Z3H0 272 aa23.62■■□□□ 1.37
CLN3-240ENST00000631023 BLIDQ8IZY5 108 aa23.62■■□□□ 1.37
CLN3-240ENST00000631023 NSUN7Q8NE18 718 aaKnown RBP23.62■■□□□ 1.37
CLN3-240ENST00000631023 TOX2Q96NM4 488 aa23.62■■□□□ 1.37
CLN3-240ENST00000631023 PPFIA4O75335 1185 aa23.61■■□□□ 1.37
CLN3-240ENST00000631023 DAGLBQ8NCG7 672 aa23.61■■□□□ 1.37
CLN3-240ENST00000631023 RASGRP4Q8TDF6 673 aa23.61■■□□□ 1.37
CLN3-240ENST00000631023 LLPHQ9BRT6 129 aaKnown RBP23.61■■□□□ 1.37
CLN3-240ENST00000631023 ALG1Q9BT22 464 aa23.61■■□□□ 1.37
CLN3-240ENST00000631023 ZMYND8Q9ULU4 1186 aaPredicted RBP23.61■■□□□ 1.37
CLN3-240ENST00000631023 ADAMTS3O15072 1205 aa23.61■■□□□ 1.37
CLN3-240ENST00000631023 CYP3A4P08684 503 aa23.61■■□□□ 1.37
CLN3-240ENST00000631023 METTL7BQ6UX53 244 aa23.61■■□□□ 1.37
CLN3-240ENST00000631023 CYFIP1Q7L576 1253 aa23.61■■□□□ 1.37
CLN3-240ENST00000631023 CCDC83Q8IWF9 413 aa23.61■■□□□ 1.37
CLN3-240ENST00000631023 NOP56O00567 594 aaKnown RBP23.6■■□□□ 1.37
CLN3-240ENST00000631023 SORBS3O60504 671 aa23.6■■□□□ 1.37
CLN3-240ENST00000631023 FDPSP14324 419 aaKnown RBP23.6■■□□□ 1.37
CLN3-240ENST00000631023 HSDL1Q3SXM5 330 aa23.6■■□□□ 1.37
CLN3-240ENST00000631023 NIPA1Q7RTP0 329 aa23.6■■□□□ 1.37
CLN3-240ENST00000631023 SLC43A3Q8NBI5 491 aa23.6■■□□□ 1.37
CLN3-240ENST00000631023 PHF20Q9BVI0 1012 aa23.6■■□□□ 1.37
CLN3-240ENST00000631023 KCNH7Q9NS40 1196 aa23.6■■□□□ 1.37
CLN3-240ENST00000631023 MEIS1O00470 390 aa23.59■■□□□ 1.37
CLN3-240ENST00000631023 TLR3O15455 904 aaKnown RBP23.59■■□□□ 1.37
CLN3-240ENST00000631023 SYN1P17600 705 aa23.59■■□□□ 1.37
CLN3-240ENST00000631023 MCM2P49736 904 aa23.59■■□□□ 1.37
CLN3-240ENST00000631023 PSMC6P62333 389 aa23.59■■□□□ 1.37
CLN3-240ENST00000631023 CRYGNQ8WXF5 182 aa23.59■■□□□ 1.37
CLN3-240ENST00000631023 KCNJ14Q9UNX9 436 aa23.59■■□□□ 1.37
CLN3-240ENST00000631023 JAK2O60674 1132 aa23.58■■□□□ 1.37
CLN3-240ENST00000631023 DTNBO60941 627 aa23.58■■□□□ 1.37
CLN3-240ENST00000631023 CLTBP09497 229 aa23.58■■□□□ 1.37
CLN3-240ENST00000631023 CYP2W1Q8TAV3 490 aa23.58■■□□□ 1.37
CLN3-240ENST00000631023 PRDM5Q9NQX1 630 aaPredicted RBP23.58■■□□□ 1.37
CLN3-240ENST00000631023 GRIN2DO15399 1336 aa23.58■■□□□ 1.37
CLN3-240ENST00000631023 ATP9AO75110 1047 aa23.57■■□□□ 1.36
CLN3-240ENST00000631023 HOXD8P13378 290 aaPredicted RBP23.57■■□□□ 1.36
CLN3-240ENST00000631023 KCNA2P16389 499 aa23.57■■□□□ 1.36
CLN3-240ENST00000631023 ST3GAL1Q11201 340 aa23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms